RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 FGFRL1Q8N441 504 aa6.73□□□□□ -1.33
NEDD9-204ENST00000448183 ZNF502Q8TBZ5 544 aa6.73□□□□□ -1.33
NEDD9-204ENST00000448183 PARD6GQ9BYG4 376 aaPredicted RBP6.73□□□□□ -1.33
NEDD9-204ENST00000448183 RBKSQ9H477 322 aa6.73□□□□□ -1.33
NEDD9-204ENST00000448183 IL36RNQ9UBH0 155 aa6.73□□□□□ -1.33
NEDD9-204ENST00000448183 IGHV3OR15-7A0A075B7D8 119 aa6.72□□□□□ -1.33
NEDD9-204ENST00000448183 LNP1A1A4G5 178 aa6.72□□□□□ -1.33
NEDD9-204ENST00000448183 TMEM189A5PLL7 270 aa6.72□□□□□ -1.33
NEDD9-204ENST00000448183 KBTBD11O94819 623 aa6.72□□□□□ -1.33
NEDD9-204ENST00000448183 CD74P04233 296 aa6.72□□□□□ -1.33
NEDD9-204ENST00000448183 TRGC1P0CF51 173 aa6.72□□□□□ -1.33
NEDD9-204ENST00000448183 APELAP0DMC3 54 aa6.72□□□□□ -1.33
NEDD9-204ENST00000448183 IL11P20809 199 aa6.72□□□□□ -1.33
NEDD9-204ENST00000448183 FOXC1Q12948 553 aa6.72□□□□□ -1.33
NEDD9-204ENST00000448183 SLC25A47Q6Q0C1 308 aa6.72□□□□□ -1.33
NEDD9-204ENST00000448183 MUC15Q8N387 334 aa6.72□□□□□ -1.33
NEDD9-204ENST00000448183 TPRX1Q8N7U7 411 aa6.72□□□□□ -1.33
NEDD9-204ENST00000448183 RTTNQ86VV8 2226 aa6.72□□□□□ -1.33
NEDD9-204ENST00000448183 SNRNP200O75643 2136 aaKnown RBP6.72□□□□□ -1.33
NEDD9-204ENST00000448183 UBR3Q6ZT12 1888 aa6.72□□□□□ -1.33
NEDD9-204ENST00000448183 IGKV3-7A0A075B6H7 116 aa6.72□□□□□ -1.33
NEDD9-204ENST00000448183 A0A0B4J293 547 aa6.72□□□□□ -1.33
NEDD9-204ENST00000448183 IGHV5-10-1A0A0J9YXX1 117 aa6.72□□□□□ -1.33
NEDD9-204ENST00000448183 UQCRFS1P47985 274 aa6.72□□□□□ -1.33
NEDD9-204ENST00000448183 RARRES2Q99969 163 aa6.72□□□□□ -1.33
NEDD9-204ENST00000448183 METTL1Q9UBP6 276 aaKnown RBP6.72□□□□□ -1.33
NEDD9-204ENST00000448183 TMEM265A0A087WTH1 108 aa6.72□□□□□ -1.33
NEDD9-204ENST00000448183 IGHV3-21A0A0B4J1V1 117 aa6.72□□□□□ -1.33
NEDD9-204ENST00000448183 GLIPR1P48060 266 aa6.72□□□□□ -1.33
NEDD9-204ENST00000448183 REG1BP48304 166 aa6.72□□□□□ -1.33
NEDD9-204ENST00000448183 SPEM2Q0P670 501 aa6.72□□□□□ -1.33
NEDD9-204ENST00000448183 C1orf53Q5VUE5 145 aa6.72□□□□□ -1.33
NEDD9-204ENST00000448183 MIC13Q5XKP0 118 aa6.72□□□□□ -1.33
NEDD9-204ENST00000448183 DEFB124Q8NES8 71 aa6.72□□□□□ -1.33
NEDD9-204ENST00000448183 CDX2Q99626 313 aaPredicted RBP6.72□□□□□ -1.33
NEDD9-204ENST00000448183 PQLC2LA1A4F0 135 aa6.72□□□□□ -1.33
NEDD9-204ENST00000448183 NPIPB9F8W1W9 429 aa6.72□□□□□ -1.33
NEDD9-204ENST00000448183 LMX1BO60663 402 aa6.72□□□□□ -1.33
NEDD9-204ENST00000448183 CD8AP01732 235 aa6.72□□□□□ -1.33
NEDD9-204ENST00000448183 COX6CP09669 75 aa6.72□□□□□ -1.33
NEDD9-204ENST00000448183 GCSHP23434 173 aa6.72□□□□□ -1.33
NEDD9-204ENST00000448183 CD82P27701 267 aa6.72□□□□□ -1.33
NEDD9-204ENST00000448183 CCDC144NLQ6NUI1 221 aa6.72□□□□□ -1.33
NEDD9-204ENST00000448183 SELENOHQ8IZQ5 122 aaKnown RBP6.72□□□□□ -1.33
NEDD9-204ENST00000448183 ZNF645Q8N7E2 425 aa6.72□□□□□ -1.33
NEDD9-204ENST00000448183 QTRT1Q9BXR0 403 aaKnown RBP6.72□□□□□ -1.33
NEDD9-204ENST00000448183 FAM117AQ9C073 453 aa6.72□□□□□ -1.33
NEDD9-204ENST00000448183 SLC25A10Q9UBX3 287 aaPredicted RBP6.72□□□□□ -1.33
NEDD9-204ENST00000448183 HSPB7Q9UBY9 170 aa6.72□□□□□ -1.33
NEDD9-204ENST00000448183 PILRAQ9UKJ1 303 aa6.72□□□□□ -1.33
NEDD9-204ENST00000448183 PGPA6NDG6 321 aa6.71□□□□□ -1.33
NEDD9-204ENST00000448183 OR2H2O95918 312 aa6.71□□□□□ -1.33
NEDD9-204ENST00000448183 SOD3P08294 240 aa6.71□□□□□ -1.33
NEDD9-204ENST00000448183 SNRPCP09234 159 aaKnown RBP6.71□□□□□ -1.33
NEDD9-204ENST00000448183 FOLR2P14207 255 aa6.71□□□□□ -1.33
NEDD9-204ENST00000448183 CKS2P33552 79 aa6.71□□□□□ -1.33
NEDD9-204ENST00000448183 MAS1LP35410 378 aa6.71□□□□□ -1.33
NEDD9-204ENST00000448183 MPV17P39210 176 aa6.71□□□□□ -1.33
NEDD9-204ENST00000448183 ID4P47928 161 aa6.71□□□□□ -1.33
NEDD9-204ENST00000448183 TCTAP57738 103 aa6.71□□□□□ -1.33
NEDD9-204ENST00000448183 RTP5Q14D33 572 aa6.71□□□□□ -1.33
NEDD9-204ENST00000448183 TRIP6Q15654 476 aaKnown RBP6.71□□□□□ -1.33
NEDD9-204ENST00000448183 TWIST1Q15672 202 aa6.71□□□□□ -1.33
NEDD9-204ENST00000448183 PRSS53Q2L4Q9 553 aa6.71□□□□□ -1.33
NEDD9-204ENST00000448183 ZNF362Q5T0B9 420 aaPredicted RBP6.71□□□□□ -1.33
NEDD9-204ENST00000448183 GCSAMQ8N6F7 178 aa6.71□□□□□ -1.33
NEDD9-204ENST00000448183 OR52M1Q8NGK5 317 aa6.71□□□□□ -1.33
NEDD9-204ENST00000448183 OR10S1Q8NGN2 331 aa6.71□□□□□ -1.33
NEDD9-204ENST00000448183 PPIAL4EA0A075B759 164 aa6.71□□□□□ -1.34
NEDD9-204ENST00000448183 LOC107984156A0A0G2JMH3 177 aa6.71□□□□□ -1.34
NEDD9-204ENST00000448183 DHRS7CA6NNS2 312 aa6.71□□□□□ -1.34
NEDD9-204ENST00000448183 PPIAL4DF5H284 164 aa6.71□□□□□ -1.34
NEDD9-204ENST00000448183 PPIAL4FP0DN26 164 aa6.71□□□□□ -1.34
NEDD9-204ENST00000448183 HTN1P15515 57 aa6.71□□□□□ -1.34
NEDD9-204ENST00000448183 MC5RP33032 325 aa6.71□□□□□ -1.34
NEDD9-204ENST00000448183 DCAF10Q5QP82 559 aa6.71□□□□□ -1.34
NEDD9-204ENST00000448183 CALHM1Q8IU99 346 aa6.71□□□□□ -1.34
NEDD9-204ENST00000448183 ARL17AQ8IVW1 177 aa6.71□□□□□ -1.34
NEDD9-204ENST00000448183 POC1AQ8NBT0 407 aa6.71□□□□□ -1.34
NEDD9-204ENST00000448183 RAB37Q96AX2 223 aa6.71□□□□□ -1.34
NEDD9-204ENST00000448183 CBLN4Q9NTU7 201 aa6.71□□□□□ -1.34
NEDD9-204ENST00000448183 RABAC1Q9UI14 185 aa6.71□□□□□ -1.34
NEDD9-204ENST00000448183 PPIAL4AQ9Y536 164 aa6.71□□□□□ -1.34
NEDD9-204ENST00000448183 R4GN57 208 aa6.71□□□□□ -1.34
NEDD9-204ENST00000448183 TRBV23-1A0A0A0MS06 115 aa6.71□□□□□ -1.34
NEDD9-204ENST00000448183 MOSPD3O75425 235 aa6.71□□□□□ -1.34
NEDD9-204ENST00000448183 SRIP30626 198 aa6.71□□□□□ -1.34
NEDD9-204ENST00000448183 IZUMO4Q1ZYL8 232 aa6.71□□□□□ -1.34
NEDD9-204ENST00000448183 ERASQ7Z444 233 aa6.71□□□□□ -1.34
NEDD9-204ENST00000448183 REC114Q7Z4M0 266 aa6.71□□□□□ -1.34
NEDD9-204ENST00000448183 C1orf210Q8IVY1 113 aa6.71□□□□□ -1.34
NEDD9-204ENST00000448183 SPSB4Q96A44 273 aa6.71□□□□□ -1.34
NEDD9-204ENST00000448183 ZNF501Q96CX3 271 aaPredicted RBP6.71□□□□□ -1.34
NEDD9-204ENST00000448183 SDHCQ99643 169 aaPredicted RBP6.71□□□□□ -1.34
NEDD9-204ENST00000448183 TMEM70Q9BUB7 260 aa6.71□□□□□ -1.34
NEDD9-204ENST00000448183 GGACTQ9BVM4 153 aa6.71□□□□□ -1.34
NEDD9-204ENST00000448183 PARLQ9H300 379 aa6.71□□□□□ -1.34
NEDD9-204ENST00000448183 FAM206AQ9NX38 181 aa6.71□□□□□ -1.34
NEDD9-204ENST00000448183 LHFPL6Q9Y693 200 aa6.71□□□□□ -1.34
NEDD9-204ENST00000448183 RGPD3A6NKT7 1758 aaPredicted RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms