RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 CRISP2P16562 243 aa11.81□□□□□ -0.52
VPS52-212ENST00000445902 UBE2NP61088 152 aaKnown RBP11.81□□□□□ -0.52
VPS52-212ENST00000445902 ZXDAP98168 799 aa11.81□□□□□ -0.52
VPS52-212ENST00000445902 MSMO1Q15800 293 aa11.81□□□□□ -0.52
VPS52-212ENST00000445902 Q6ZS49 121 aa11.81□□□□□ -0.52
VPS52-212ENST00000445902 BTF3L4Q96K17 158 aa11.81□□□□□ -0.52
VPS52-212ENST00000445902 CHCHD2Q9Y6H1 151 aaPredicted RBP11.81□□□□□ -0.52
VPS52-212ENST00000445902 DUX1O43812 170 aa11.8□□□□□ -0.52
VPS52-212ENST00000445902 PIAS2O75928 621 aa11.8□□□□□ -0.52
VPS52-212ENST00000445902 IGLV2-14P01704 120 aa11.8□□□□□ -0.52
VPS52-212ENST00000445902 CARD18P57730 90 aa11.8□□□□□ -0.52
VPS52-212ENST00000445902 FGF12P61328 243 aa11.8□□□□□ -0.52
VPS52-212ENST00000445902 PRDX4Q13162 271 aa11.8□□□□□ -0.52
VPS52-212ENST00000445902 CEACAM16Q2WEN9 425 aa11.8□□□□□ -0.52
VPS52-212ENST00000445902 FBXW9Q5XUX1 488 aa11.8□□□□□ -0.52
VPS52-212ENST00000445902 C7orf61Q8IZ16 206 aa11.8□□□□□ -0.52
VPS52-212ENST00000445902 ARL6IP6Q8N6S5 226 aa11.8□□□□□ -0.52
VPS52-212ENST00000445902 FADS6Q8N9I5 356 aa11.8□□□□□ -0.52
VPS52-212ENST00000445902 OR5AU1Q8NGC0 362 aa11.8□□□□□ -0.52
VPS52-212ENST00000445902 SFRP2Q96HF1 295 aa11.8□□□□□ -0.52
VPS52-212ENST00000445902 OR2H1Q9GZK4 316 aa11.8□□□□□ -0.52
VPS52-212ENST00000445902 SLC17A3O00476 420 aa11.8□□□□□ -0.52
VPS52-212ENST00000445902 KRASP01116 189 aa11.8□□□□□ -0.52
VPS52-212ENST00000445902 SLC25A6P12236 298 aa11.8□□□□□ -0.52
VPS52-212ENST00000445902 CLDN15P56746 228 aa11.8□□□□□ -0.52
VPS52-212ENST00000445902 PSMF1Q92530 271 aa11.8□□□□□ -0.52
VPS52-212ENST00000445902 SLC35E1Q96K37 410 aa11.8□□□□□ -0.52
VPS52-212ENST00000445902 AKIRIN1Q9H9L7 192 aaPredicted RBP11.8□□□□□ -0.52
VPS52-212ENST00000445902 FBXL7Q9UJT9 491 aa11.8□□□□□ -0.52
VPS52-212ENST00000445902 TRBV20OR9-2A0A075B6H5 130 aa11.79□□□□□ -0.52
VPS52-212ENST00000445902 MDFIC2A0A1B0GVS7 189 aa11.79□□□□□ -0.52
VPS52-212ENST00000445902 TRAPPC2LH3BP13 241 aa11.79□□□□□ -0.52
VPS52-212ENST00000445902 SIRPB1O00241 398 aa11.79□□□□□ -0.52
VPS52-212ENST00000445902 SH2D1BO14796 132 aa11.79□□□□□ -0.52
VPS52-212ENST00000445902 CTXN2P0C2S0 81 aa11.79□□□□□ -0.52
VPS52-212ENST00000445902 COX5AP20674 150 aa11.79□□□□□ -0.52
VPS52-212ENST00000445902 COMPP49747 757 aaPredicted RBP11.79□□□□□ -0.52
VPS52-212ENST00000445902 LHX2P50458 406 aa11.79□□□□□ -0.52
VPS52-212ENST00000445902 ZDHHC16Q969W1 377 aa11.79□□□□□ -0.52
VPS52-212ENST00000445902 R4GN57 208 aa11.79□□□□□ -0.52
VPS52-212ENST00000445902 F6UZH7 168 aa11.79□□□□□ -0.52
VPS52-212ENST00000445902 SPINK4O60575 86 aa11.79□□□□□ -0.52
VPS52-212ENST00000445902 CCL3P10147 92 aa11.79□□□□□ -0.52
VPS52-212ENST00000445902 KITLGP21583 273 aa11.79□□□□□ -0.52
VPS52-212ENST00000445902 COL8A2P25067 703 aa11.79□□□□□ -0.52
VPS52-212ENST00000445902 C17orf82Q86X59 251 aaPredicted RBP11.79□□□□□ -0.52
VPS52-212ENST00000445902 LSM10Q969L4 123 aaKnown RBP11.79□□□□□ -0.52
VPS52-212ENST00000445902 MRPL18Q9H0U6 180 aaKnown RBP11.79□□□□□ -0.52
VPS52-212ENST00000445902 C20orf202A1L168 122 aa11.79□□□□□ -0.52
VPS52-212ENST00000445902 EPOPA6NHQ4 379 aa11.79□□□□□ -0.52
VPS52-212ENST00000445902 CCL25O15444 150 aa11.79□□□□□ -0.52
VPS52-212ENST00000445902 NDUFB8O95169 186 aa11.79□□□□□ -0.52
VPS52-212ENST00000445902 G6PCP35575 357 aa11.79□□□□□ -0.52
VPS52-212ENST00000445902 CDC34P49427 236 aaPredicted RBP11.79□□□□□ -0.52
VPS52-212ENST00000445902 PTTG1IPP53801 180 aa11.79□□□□□ -0.52
VPS52-212ENST00000445902 ZNF90Q03938 601 aa11.79□□□□□ -0.52
VPS52-212ENST00000445902 TMEM14EPQ6UXP3 125 aa11.79□□□□□ -0.52
VPS52-212ENST00000445902 FGFRL1Q8N441 504 aa11.79□□□□□ -0.52
VPS52-212ENST00000445902 CPEB3Q8NE35 698 aaKnown RBP11.79□□□□□ -0.52
VPS52-212ENST00000445902 FOXB1Q99853 325 aa11.79□□□□□ -0.52
VPS52-212ENST00000445902 NPCDR1Q9BY65 106 aa11.79□□□□□ -0.52
VPS52-212ENST00000445902 MTIF3Q9H2K0 278 aaKnown RBP11.79□□□□□ -0.52
VPS52-212ENST00000445902 LMO7DNF2Z398 122 aa11.78□□□□□ -0.52
VPS52-212ENST00000445902 CBR3O75828 277 aa11.78□□□□□ -0.52
VPS52-212ENST00000445902 TGFBR3Q03167 851 aa11.78□□□□□ -0.52
VPS52-212ENST00000445902 ETFRF1Q6IPR1 90 aa11.78□□□□□ -0.52
VPS52-212ENST00000445902 MCEMP1Q8IX19 187 aa11.78□□□□□ -0.52
VPS52-212ENST00000445902 NCKAP5O14513 1909 aa11.78□□□□□ -0.52
VPS52-212ENST00000445902 RAMP3O60896 148 aa11.78□□□□□ -0.52
VPS52-212ENST00000445902 VAMP5O95183 116 aa11.78□□□□□ -0.52
VPS52-212ENST00000445902 OR5G3P0C626 314 aa11.78□□□□□ -0.52
VPS52-212ENST00000445902 IER3P46695 156 aa11.78□□□□□ -0.52
VPS52-212ENST00000445902 ZNF816Q0VGE8 651 aaPredicted RBP11.78□□□□□ -0.52
VPS52-212ENST00000445902 SPATA45Q537H7 98 aa11.78□□□□□ -0.52
VPS52-212ENST00000445902 KMT5CQ86Y97 462 aa11.78□□□□□ -0.52
VPS52-212ENST00000445902 TIMM9Q9Y5J7 89 aa11.78□□□□□ -0.52
VPS52-212ENST00000445902 NBEAQ8NFP9 2946 aa11.77□□□□□ -0.52
VPS52-212ENST00000445902 C10orf142B7Z368 130 aa11.77□□□□□ -0.52
VPS52-212ENST00000445902 ZG16O60844 167 aa11.77□□□□□ -0.52
VPS52-212ENST00000445902 SERPINA7P05543 415 aa11.77□□□□□ -0.52
VPS52-212ENST00000445902 RANP62826 216 aaKnown RBP11.77□□□□□ -0.52
VPS52-212ENST00000445902 PAFAH1B2P68402 229 aa11.77□□□□□ -0.52
VPS52-212ENST00000445902 FOXL1Q12952 345 aa11.77□□□□□ -0.52
VPS52-212ENST00000445902 TRIM61Q5EBN2 209 aa11.77□□□□□ -0.52
VPS52-212ENST00000445902 AAED1Q7RTV5 226 aa11.77□□□□□ -0.52
VPS52-212ENST00000445902 TIPARPQ7Z3E1 657 aaKnown RBP11.77□□□□□ -0.52
VPS52-212ENST00000445902 MRPL52Q86TS9 123 aaKnown RBP11.77□□□□□ -0.52
VPS52-212ENST00000445902 MKXQ8IYA7 352 aa11.77□□□□□ -0.52
VPS52-212ENST00000445902 CADM4Q8NFZ8 388 aa11.77□□□□□ -0.52
VPS52-212ENST00000445902 TXN2Q99757 166 aa11.77□□□□□ -0.52
VPS52-212ENST00000445902 TMEM147Q9BVK8 224 aa11.77□□□□□ -0.52
VPS52-212ENST00000445902 KMT2EQ8IZD2 1858 aa11.77□□□□□ -0.53
VPS52-212ENST00000445902 ADAMTS20P59510 1910 aa11.77□□□□□ -0.53
VPS52-212ENST00000445902 TRAV24A0A0B4J272 114 aa11.77□□□□□ -0.53
VPS52-212ENST00000445902 DIRC3C9JPN6 131 aa11.77□□□□□ -0.53
VPS52-212ENST00000445902 ZIC3O60481 467 aa11.77□□□□□ -0.53
VPS52-212ENST00000445902 RBMXL2O75526 392 aaKnown RBP11.77□□□□□ -0.53
VPS52-212ENST00000445902 EDDM3BP56851 147 aa11.77□□□□□ -0.53
VPS52-212ENST00000445902 RBX1P62877 108 aa11.77□□□□□ -0.53
VPS52-212ENST00000445902 HLA-DRB5Q30154 266 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms