RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 TAGLNQ01995 201 aaKnown RBP11.32□□□□□ -0.6
SSBP3-208ENST00000444533 HNF4GQ14541 408 aa11.32□□□□□ -0.6
SSBP3-208ENST00000444533 RNASE12Q5GAN4 147 aaKnown RBP11.32□□□□□ -0.6
SSBP3-208ENST00000444533 SPANXN2Q5MJ10 180 aa11.32□□□□□ -0.6
SSBP3-208ENST00000444533 TMEM17Q86X19 198 aa11.32□□□□□ -0.6
SSBP3-208ENST00000444533 OR8H1Q8NGG4 311 aa11.32□□□□□ -0.6
SSBP3-208ENST00000444533 OR2T6Q8NHC8 308 aa11.32□□□□□ -0.6
SSBP3-208ENST00000444533 RBM14Q96PK6 669 aaKnown RBP11.32□□□□□ -0.6
SSBP3-208ENST00000444533 AGMATQ9BSE5 352 aa11.32□□□□□ -0.6
SSBP3-208ENST00000444533 MRPL20Q9BYC9 149 aaKnown RBP11.32□□□□□ -0.6
SSBP3-208ENST00000444533 PRSS22Q9GZN4 317 aa11.32□□□□□ -0.6
SSBP3-208ENST00000444533 PARP12Q9H0J9 701 aaKnown RBP11.32□□□□□ -0.6
SSBP3-208ENST00000444533 BATF3Q9NR55 127 aa11.32□□□□□ -0.6
SSBP3-208ENST00000444533 TAS2R8Q9NYW2 309 aa11.32□□□□□ -0.6
SSBP3-208ENST00000444533 MOB4Q9Y3A3 225 aa11.32□□□□□ -0.6
SSBP3-208ENST00000444533 TMEM89A2RUT3 159 aa11.31□□□□□ -0.6
SSBP3-208ENST00000444533 FAM90A9PA6NNJ1 464 aa11.31□□□□□ -0.6
SSBP3-208ENST00000444533 NCBP2LA6PVI3 153 aaKnown RBP11.31□□□□□ -0.6
SSBP3-208ENST00000444533 ZNF736B4DX44 427 aaPredicted RBP11.31□□□□□ -0.6
SSBP3-208ENST00000444533 J3QRK9 145 aa11.31□□□□□ -0.6
SSBP3-208ENST00000444533 PMP2P02689 132 aa11.31□□□□□ -0.6
SSBP3-208ENST00000444533 NAT1P18440 290 aa11.31□□□□□ -0.6
SSBP3-208ENST00000444533 TBPP20226 339 aa11.31□□□□□ -0.6
SSBP3-208ENST00000444533 HLA-DMAP28067 261 aa11.31□□□□□ -0.6
SSBP3-208ENST00000444533 S100GP29377 79 aa11.31□□□□□ -0.6
SSBP3-208ENST00000444533 TNFSF8P32971 234 aa11.31□□□□□ -0.6
SSBP3-208ENST00000444533 SSBP1Q04837 148 aaKnown RBP11.31□□□□□ -0.6
SSBP3-208ENST00000444533 LSAMPQ13449 338 aa11.31□□□□□ -0.6
SSBP3-208ENST00000444533 HABP2Q14520 560 aaPredicted RBP11.31□□□□□ -0.6
SSBP3-208ENST00000444533 RPL39P5Q59GN2 51 aa11.31□□□□□ -0.6
SSBP3-208ENST00000444533 ODF3L1Q8IXM7 274 aa11.31□□□□□ -0.6
SSBP3-208ENST00000444533 ZNF645Q8N7E2 425 aa11.31□□□□□ -0.6
SSBP3-208ENST00000444533 OR6F1Q8NGZ6 308 aa11.31□□□□□ -0.6
SSBP3-208ENST00000444533 CFHR4Q92496 578 aa11.31□□□□□ -0.6
SSBP3-208ENST00000444533 SNAPC3Q92966 411 aa11.31□□□□□ -0.6
SSBP3-208ENST00000444533 ADTRPQ96IZ2 230 aa11.31□□□□□ -0.6
SSBP3-208ENST00000444533 NABP2Q9BQ15 211 aa11.31□□□□□ -0.6
SSBP3-208ENST00000444533 GAB2Q9UQC2 676 aa11.31□□□□□ -0.6
SSBP3-208ENST00000444533 ATRQ13535 2644 aa11.3□□□□□ -0.6
SSBP3-208ENST00000444533 CTDSPLO15194 276 aa11.3□□□□□ -0.6
SSBP3-208ENST00000444533 HRH1P35367 487 aa11.3□□□□□ -0.6
SSBP3-208ENST00000444533 TAS2R19P59542 299 aa11.3□□□□□ -0.6
SSBP3-208ENST00000444533 DYRK1AQ13627 763 aa11.3□□□□□ -0.6
SSBP3-208ENST00000444533 RTL8BQ17RB0 113 aa11.3□□□□□ -0.6
SSBP3-208ENST00000444533 RNASE10Q5GAN6 216 aaKnown RBP11.3□□□□□ -0.6
SSBP3-208ENST00000444533 C11orf88Q6PI97 169 aa11.3□□□□□ -0.6
SSBP3-208ENST00000444533 OR52I2Q8NH67 350 aa11.3□□□□□ -0.6
SSBP3-208ENST00000444533 GIMAP1Q8WWP7 306 aa11.3□□□□□ -0.6
SSBP3-208ENST00000444533 ABHD1Q96SE0 405 aa11.3□□□□□ -0.6
SSBP3-208ENST00000444533 ZNF251Q9BRH9 671 aa11.3□□□□□ -0.6
SSBP3-208ENST00000444533 KIAA1456Q9P272 454 aa11.3□□□□□ -0.6
SSBP3-208ENST00000444533 MTFP1Q9UDX5 166 aa11.3□□□□□ -0.6
SSBP3-208ENST00000444533 ANAPC10Q9UM13 185 aa11.3□□□□□ -0.6
SSBP3-208ENST00000444533 PRELID3BQ9Y3B1 194 aa11.3□□□□□ -0.6
SSBP3-208ENST00000444533 WASHC3Q9Y3C0 194 aa11.3□□□□□ -0.6
SSBP3-208ENST00000444533 CUBNO60494 3623 aa11.29□□□□□ -0.6
SSBP3-208ENST00000444533 TSPAN9O75954 239 aa11.29□□□□□ -0.6
SSBP3-208ENST00000444533 PPYP01298 95 aa11.29□□□□□ -0.6
SSBP3-208ENST00000444533 CSF1P09603 554 aa11.29□□□□□ -0.6
SSBP3-208ENST00000444533 RRASP10301 218 aa11.29□□□□□ -0.6
SSBP3-208ENST00000444533 PTBP1P26599 531 aaKnown RBP eCLIP11.29□□□□□ -0.6
SSBP3-208ENST00000444533 RFX2P48378 723 aa11.29□□□□□ -0.6
SSBP3-208ENST00000444533 THBS3P49746 956 aa11.29□□□□□ -0.6
SSBP3-208ENST00000444533 FXYD4P59646 89 aa11.29□□□□□ -0.6
SSBP3-208ENST00000444533 EBI3Q14213 229 aa11.29□□□□□ -0.6
SSBP3-208ENST00000444533 PYDC2Q56P42 97 aa11.29□□□□□ -0.6
SSBP3-208ENST00000444533 LPCAT3Q6P1A2 487 aa11.29□□□□□ -0.6
SSBP3-208ENST00000444533 CCBE1Q6UXH8 406 aaPredicted RBP11.29□□□□□ -0.6
SSBP3-208ENST00000444533 OVCH2Q7RTZ1 564 aa11.29□□□□□ -0.6
SSBP3-208ENST00000444533 C3orf56Q8N813 242 aa11.29□□□□□ -0.6
SSBP3-208ENST00000444533 SMIM4Q8WVI0 70 aa11.29□□□□□ -0.6
SSBP3-208ENST00000444533 SECTM1Q8WVN6 248 aa11.29□□□□□ -0.6
SSBP3-208ENST00000444533 EAF1Q96JC9 268 aaPredicted RBP11.29□□□□□ -0.6
SSBP3-208ENST00000444533 RASL11BQ9BPW5 248 aa11.29□□□□□ -0.6
SSBP3-208ENST00000444533 ZNF2Q9BSG1 426 aaPredicted RBP11.29□□□□□ -0.6
SSBP3-208ENST00000444533 SLC5A7Q9GZV3 580 aa11.29□□□□□ -0.6
SSBP3-208ENST00000444533 SDHAF2Q9NX18 166 aa11.29□□□□□ -0.6
SSBP3-208ENST00000444533 KLK11Q9UBX7 282 aa11.29□□□□□ -0.6
SSBP3-208ENST00000444533 ZNF107Q9UII5 783 aaPredicted RBP11.29□□□□□ -0.6
SSBP3-208ENST00000444533 CLPSL1A2RUU4 121 aa11.28□□□□□ -0.6
SSBP3-208ENST00000444533 FGF16O43320 207 aa11.28□□□□□ -0.6
SSBP3-208ENST00000444533 CHST1O43916 411 aa11.28□□□□□ -0.6
SSBP3-208ENST00000444533 TUSC2O75896 110 aa11.28□□□□□ -0.6
SSBP3-208ENST00000444533 AADACP22760 399 aa11.28□□□□□ -0.6
SSBP3-208ENST00000444533 AP3S2P59780 193 aa11.28□□□□□ -0.6
SSBP3-208ENST00000444533 PLGLAQ15195 96 aa11.28□□□□□ -0.6
SSBP3-208ENST00000444533 MMDQ15546 238 aa11.28□□□□□ -0.6
SSBP3-208ENST00000444533 AWAT1Q58HT5 328 aa11.28□□□□□ -0.6
SSBP3-208ENST00000444533 C9orf152Q5JTZ5 239 aa11.28□□□□□ -0.6
SSBP3-208ENST00000444533 DHRS11Q6UWP2 260 aa11.28□□□□□ -0.6
SSBP3-208ENST00000444533 PDPNQ86YL7 162 aa11.28□□□□□ -0.6
SSBP3-208ENST00000444533 CMTM1Q8IZ96 169 aa11.28□□□□□ -0.6
SSBP3-208ENST00000444533 DRAXINQ8NBI3 349 aaPredicted RBP11.28□□□□□ -0.6
SSBP3-208ENST00000444533 ZBTB34Q8NCN2 500 aa11.28□□□□□ -0.6
SSBP3-208ENST00000444533 HSD17B10Q99714 261 aaKnown RBP11.28□□□□□ -0.6
SSBP3-208ENST00000444533 MDFIQ99750 246 aa11.28□□□□□ -0.6
SSBP3-208ENST00000444533 RNF5Q99942 180 aa11.28□□□□□ -0.6
SSBP3-208ENST00000444533 C16orf95Q9H693 158 aa11.28□□□□□ -0.6
SSBP3-208ENST00000444533 SLC35D1Q9NTN3 355 aa11.28□□□□□ -0.6
SSBP3-208ENST00000444533 RNF114Q9Y508 228 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms