RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 DPCDQ9BVM2 203 aaPredicted RBP7.05□□□□□ -1.28
USP6NL-203ENST00000443016 PRSS22Q9GZN4 317 aa7.05□□□□□ -1.28
USP6NL-203ENST00000443016 OR6C3Q9NZP0 311 aa7.05□□□□□ -1.28
USP6NL-203ENST00000443016 DPM3Q9P2X0 92 aa7.05□□□□□ -1.28
USP6NL-203ENST00000443016 DSCAML1Q8TD84 2053 aa7.05□□□□□ -1.28
USP6NL-203ENST00000443016 MEIKINA0A087WXM9 373 aa7.04□□□□□ -1.28
USP6NL-203ENST00000443016 TMEM235A6NFC5 223 aa7.04□□□□□ -1.28
USP6NL-203ENST00000443016 PRSS29PA6NIE9 313 aa7.04□□□□□ -1.28
USP6NL-203ENST00000443016 FOXI3A8MTJ6 420 aaPredicted RBP7.04□□□□□ -1.28
USP6NL-203ENST00000443016 GABARAPH6UMI1 98 aa7.04□□□□□ -1.28
USP6NL-203ENST00000443016 CSN2P05814 226 aa7.04□□□□□ -1.28
USP6NL-203ENST00000443016 GNB3P16520 340 aa7.04□□□□□ -1.28
USP6NL-203ENST00000443016 CD33P20138 364 aa7.04□□□□□ -1.28
USP6NL-203ENST00000443016 BRS3P32247 399 aa7.04□□□□□ -1.28
USP6NL-203ENST00000443016 CEACAM3P40198 252 aa7.04□□□□□ -1.28
USP6NL-203ENST00000443016 GLP1RP43220 463 aa7.04□□□□□ -1.28
USP6NL-203ENST00000443016 MADCAM1Q13477 382 aa7.04□□□□□ -1.28
USP6NL-203ENST00000443016 HACD4Q5VWC8 232 aa7.04□□□□□ -1.28
USP6NL-203ENST00000443016 C6orf201Q7Z4U5 140 aa7.04□□□□□ -1.28
USP6NL-203ENST00000443016 Q8N402 240 aa7.04□□□□□ -1.28
USP6NL-203ENST00000443016 SUMF2Q8NBJ7 301 aa7.04□□□□□ -1.28
USP6NL-203ENST00000443016 SMIM4Q8WVI0 70 aa7.04□□□□□ -1.28
USP6NL-203ENST00000443016 BORCS5Q969J3 196 aa7.04□□□□□ -1.28
USP6NL-203ENST00000443016 CREB3L1Q96BA8 519 aa7.04□□□□□ -1.28
USP6NL-203ENST00000443016 SRRQ9GZT4 340 aa7.04□□□□□ -1.28
USP6NL-203ENST00000443016 RIMS4Q9H426 269 aaPredicted RBP7.04□□□□□ -1.28
USP6NL-203ENST00000443016 CHMP1AQ9HD42 196 aaPredicted RBP7.04□□□□□ -1.28
USP6NL-203ENST00000443016 C12orf4Q9NQ89 552 aa7.04□□□□□ -1.28
USP6NL-203ENST00000443016 IFT46Q9NQC8 304 aa7.04□□□□□ -1.28
USP6NL-203ENST00000443016 PRELID1Q9Y255 219 aa7.04□□□□□ -1.28
USP6NL-203ENST00000443016 A6NDX4 124 aa7.04□□□□□ -1.28
USP6NL-203ENST00000443016 LEUTXA8MZ59 168 aa7.04□□□□□ -1.28
USP6NL-203ENST00000443016 SSBP1Q04837 148 aaKnown RBP7.04□□□□□ -1.28
USP6NL-203ENST00000443016 ZNF260Q3ZCT1 412 aa7.04□□□□□ -1.28
USP6NL-203ENST00000443016 PLAC9Q5JTB6 97 aa7.04□□□□□ -1.28
USP6NL-203ENST00000443016 SAMD5Q5TGI4 173 aa7.04□□□□□ -1.28
USP6NL-203ENST00000443016 HIST2H2BDQ6DRA6 164 aa7.04□□□□□ -1.28
USP6NL-203ENST00000443016 Q6P435 159 aa7.04□□□□□ -1.28
USP6NL-203ENST00000443016 RBPMS2Q6ZRY4 209 aaKnown RBP7.04□□□□□ -1.28
USP6NL-203ENST00000443016 RTN4RL2Q86UN3 420 aa7.04□□□□□ -1.28
USP6NL-203ENST00000443016 OR4P4Q8NGL7 312 aa7.04□□□□□ -1.28
USP6NL-203ENST00000443016 RRNAD1Q96FB5 475 aaKnown RBP7.04□□□□□ -1.28
USP6NL-203ENST00000443016 CMSS1Q9BQ75 279 aaKnown RBP7.04□□□□□ -1.28
USP6NL-203ENST00000443016 ETAA1Q9NY74 926 aa7.04□□□□□ -1.28
USP6NL-203ENST00000443016 TET2Q6N021 2002 aaPredicted RBP7.03□□□□□ -1.28
USP6NL-203ENST00000443016 HLA-DQB1P01920 261 aa7.03□□□□□ -1.28
USP6NL-203ENST00000443016 AMY1AP04745 511 aa7.03□□□□□ -1.28
USP6NL-203ENST00000443016 CD24P25063 80 aa7.03□□□□□ -1.28
USP6NL-203ENST00000443016 DYNLT3P51808 116 aa7.03□□□□□ -1.28
USP6NL-203ENST00000443016 AP3S2P59780 193 aa7.03□□□□□ -1.28
USP6NL-203ENST00000443016 BLCAPP62952 87 aa7.03□□□□□ -1.28
USP6NL-203ENST00000443016 ZNF79Q15937 498 aa7.03□□□□□ -1.28
USP6NL-203ENST00000443016 SIGIRRQ6IA17 410 aa7.03□□□□□ -1.28
USP6NL-203ENST00000443016 MOB1BQ7L9L4 216 aa7.03□□□□□ -1.28
USP6NL-203ENST00000443016 COQ2Q96H96 371 aa7.03□□□□□ -1.28
USP6NL-203ENST00000443016 SOSTQ9BQB4 213 aa7.03□□□□□ -1.28
USP6NL-203ENST00000443016 SULT4A1Q9BR01 284 aa7.03□□□□□ -1.28
USP6NL-203ENST00000443016 ZNF702PQ9H963 129 aa7.03□□□□□ -1.28
USP6NL-203ENST00000443016 KIF25Q9UIL4 384 aa7.03□□□□□ -1.28
USP6NL-203ENST00000443016 MGAT4AQ9UM21 535 aa7.03□□□□□ -1.28
USP6NL-203ENST00000443016 TRAV24A0A0B4J272 114 aa7.03□□□□□ -1.28
USP6NL-203ENST00000443016 TMEM30CPA0ZSE6 113 aa7.03□□□□□ -1.28
USP6NL-203ENST00000443016 UBE2QL1A1L167 161 aa7.03□□□□□ -1.28
USP6NL-203ENST00000443016 ZNF729A6NN14 1252 aaPredicted RBP7.03□□□□□ -1.28
USP6NL-203ENST00000443016 GSTZ1O43708 216 aaPredicted RBP7.03□□□□□ -1.28
USP6NL-203ENST00000443016 GSTT2BP0CG30 244 aa7.03□□□□□ -1.28
USP6NL-203ENST00000443016 RCVRNP35243 200 aa7.03□□□□□ -1.28
USP6NL-203ENST00000443016 HTR2BP41595 481 aa7.03□□□□□ -1.28
USP6NL-203ENST00000443016 TMEM50BP56557 158 aa7.03□□□□□ -1.28
USP6NL-203ENST00000443016 NSUN5P1Q3KNT7 163 aa7.03□□□□□ -1.28
USP6NL-203ENST00000443016 PDLIM3Q53GG5 364 aaPredicted RBP7.03□□□□□ -1.28
USP6NL-203ENST00000443016 RNASE12Q5GAN4 147 aaKnown RBP7.03□□□□□ -1.28
USP6NL-203ENST00000443016 C1QL4Q86Z23 238 aa7.03□□□□□ -1.28
USP6NL-203ENST00000443016 NUDCD2Q8WVJ2 157 aa7.03□□□□□ -1.28
USP6NL-203ENST00000443016 FAAP24Q9BTP7 215 aa7.03□□□□□ -1.28
USP6NL-203ENST00000443016 TAS2R8Q9NYW2 309 aa7.03□□□□□ -1.28
USP6NL-203ENST00000443016 AK3Q9UIJ7 227 aa7.03□□□□□ -1.28
USP6NL-203ENST00000443016 KBTBD11-OT1A0A1B0GTJ5 212 aa7.02□□□□□ -1.29
USP6NL-203ENST00000443016 RBBP9O75884 186 aa7.02□□□□□ -1.29
USP6NL-203ENST00000443016 IGHV3-7P01780 117 aa7.02□□□□□ -1.29
USP6NL-203ENST00000443016 DTYMKP23919 212 aa7.02□□□□□ -1.29
USP6NL-203ENST00000443016 VDAC2P45880 294 aaPredicted RBP7.02□□□□□ -1.29
USP6NL-203ENST00000443016 LTC4SQ16873 150 aa7.02□□□□□ -1.29
USP6NL-203ENST00000443016 CCDC144NLQ6NUI1 221 aa7.02□□□□□ -1.29
USP6NL-203ENST00000443016 LYG1Q8N1E2 194 aa7.02□□□□□ -1.29
USP6NL-203ENST00000443016 ZNF286AQ9HBT8 521 aa7.02□□□□□ -1.29
USP6NL-203ENST00000443016 RAB9BQ9NP90 201 aa7.02□□□□□ -1.29
USP6NL-203ENST00000443016 SERTAD4Q9NUC0 356 aa7.02□□□□□ -1.29
USP6NL-203ENST00000443016 FBXL17Q9UF56 701 aa7.02□□□□□ -1.29
USP6NL-203ENST00000443016 BUB1B-PAK6H3BSN5 160 aa7.02□□□□□ -1.29
USP6NL-203ENST00000443016 J3QRK9 145 aa7.02□□□□□ -1.29
USP6NL-203ENST00000443016 IGLV1-47P01700 117 aa7.02□□□□□ -1.29
USP6NL-203ENST00000443016 BMI1P35226 326 aa7.02□□□□□ -1.29
USP6NL-203ENST00000443016 GDNFP39905 211 aa7.02□□□□□ -1.29
USP6NL-203ENST00000443016 DGCR2P98153 550 aa7.02□□□□□ -1.29
USP6NL-203ENST00000443016 HLA-DRB5Q30154 266 aa7.02□□□□□ -1.29
USP6NL-203ENST00000443016 IGSF11Q5DX21 431 aa7.02□□□□□ -1.29
USP6NL-203ENST00000443016 OR13A1Q8NGR1 328 aa7.02□□□□□ -1.29
USP6NL-203ENST00000443016 OR52I2Q8NH67 350 aa7.02□□□□□ -1.29
USP6NL-203ENST00000443016 OR9G1Q8NH87 305 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms