RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 CCDC90BQ9GZT6 254 aa9.15□□□□□ -0.94
TTC28-203ENST00000442232 LPAR5Q9H1C0 372 aa9.15□□□□□ -0.94
TTC28-203ENST00000442232 OR1A1Q9P1Q5 309 aa9.15□□□□□ -0.94
TTC28-203ENST00000442232 METTL1Q9UBP6 276 aaKnown RBP9.15□□□□□ -0.94
TTC28-203ENST00000442232 SCOCQ9UIL1 159 aa9.15□□□□□ -0.94
TTC28-203ENST00000442232 HSF4Q9ULV5 492 aa9.15□□□□□ -0.94
TTC28-203ENST00000442232 LSM4Q9Y4Z0 139 aaKnown RBP9.15□□□□□ -0.94
TTC28-203ENST00000442232 SMAD5-AS1Q9Y6J3 95 aa9.15□□□□□ -0.94
TTC28-203ENST00000442232 SOCS1O15524 211 aa9.14□□□□□ -0.95
TTC28-203ENST00000442232 SPDEFO95238 335 aa9.14□□□□□ -0.95
TTC28-203ENST00000442232 CALRP27797 417 aaKnown RBP9.14□□□□□ -0.95
TTC28-203ENST00000442232 VEGFCP49767 419 aa9.14□□□□□ -0.95
TTC28-203ENST00000442232 CRIP2P52943 208 aaPredicted RBP9.14□□□□□ -0.95
TTC28-203ENST00000442232 TPPP2P59282 170 aa9.14□□□□□ -0.95
TTC28-203ENST00000442232 RPS16P62249 146 aaKnown RBP9.14□□□□□ -0.95
TTC28-203ENST00000442232 PITPNAQ00169 270 aa9.14□□□□□ -0.95
TTC28-203ENST00000442232 UNQ5815/PRO19632Q6UWF5 114 aa9.14□□□□□ -0.95
TTC28-203ENST00000442232 OR6Q1Q8NGQ2 317 aa9.14□□□□□ -0.95
TTC28-203ENST00000442232 DCUN1D4Q92564 292 aa9.14□□□□□ -0.95
TTC28-203ENST00000442232 FLYWCH2Q96CP2 140 aaKnown RBP9.14□□□□□ -0.95
TTC28-203ENST00000442232 HDHD3Q9BSH5 251 aaPredicted RBP9.14□□□□□ -0.95
TTC28-203ENST00000442232 C11orf54Q9H0W9 315 aaPredicted RBP9.14□□□□□ -0.95
TTC28-203ENST00000442232 SLA2Q9H6Q3 261 aa9.14□□□□□ -0.95
TTC28-203ENST00000442232 AK6Q9Y3D8 172 aaKnown RBP9.14□□□□□ -0.95
TTC28-203ENST00000442232 NBEAL2Q6ZNJ1 2754 aa9.13□□□□□ -0.95
TTC28-203ENST00000442232 A0A0A6YYD4 124 aa9.13□□□□□ -0.95
TTC28-203ENST00000442232 ARPC1BO15143 372 aaKnown RBP9.13□□□□□ -0.95
TTC28-203ENST00000442232 DENRO43583 198 aaKnown RBP9.13□□□□□ -0.95
TTC28-203ENST00000442232 CA2P00918 260 aa9.13□□□□□ -0.95
TTC28-203ENST00000442232 TFAP2AP05549 437 aa9.13□□□□□ -0.95
TTC28-203ENST00000442232 CD3GP09693 182 aa9.13□□□□□ -0.95
TTC28-203ENST00000442232 OR8U9P0C7N5 309 aa9.13□□□□□ -0.95
TTC28-203ENST00000442232 SERPINB10P48595 397 aa9.13□□□□□ -0.95
TTC28-203ENST00000442232 PSMD7P51665 324 aa9.13□□□□□ -0.95
TTC28-203ENST00000442232 SLURP1P55000 103 aa9.13□□□□□ -0.95
TTC28-203ENST00000442232 RPS25P62851 125 aaKnown RBP9.13□□□□□ -0.95
TTC28-203ENST00000442232 KIAA0141Q14154 515 aaPredicted RBP9.13□□□□□ -0.95
TTC28-203ENST00000442232 PSG5Q15238 335 aa9.13□□□□□ -0.95
TTC28-203ENST00000442232 AKIRIN2Q53H80 203 aa9.13□□□□□ -0.95
TTC28-203ENST00000442232 CD200R1LQ6Q8B3 271 aa9.13□□□□□ -0.95
TTC28-203ENST00000442232 PDPNQ86YL7 162 aa9.13□□□□□ -0.95
TTC28-203ENST00000442232 OR5AN1Q8NGI8 311 aa9.13□□□□□ -0.95
TTC28-203ENST00000442232 ARPC1AQ92747 370 aa9.13□□□□□ -0.95
TTC28-203ENST00000442232 ARHGAP5-AS1Q96IT6 56 aa9.13□□□□□ -0.95
TTC28-203ENST00000442232 ASCL2Q99929 193 aa9.13□□□□□ -0.95
TTC28-203ENST00000442232 PECRQ9BY49 303 aa9.13□□□□□ -0.95
TTC28-203ENST00000442232 TOLLIPQ9H0E2 274 aa9.13□□□□□ -0.95
TTC28-203ENST00000442232 PARP12Q9H0J9 701 aaKnown RBP9.13□□□□□ -0.95
TTC28-203ENST00000442232 ALX4Q9H161 411 aaPredicted RBP9.13□□□□□ -0.95
TTC28-203ENST00000442232 VCX3BQ9H321 246 aa9.13□□□□□ -0.95
TTC28-203ENST00000442232 Q9N2K0 584 aa9.13□□□□□ -0.95
TTC28-203ENST00000442232 ZNF355PQ9NSJ1 428 aa9.13□□□□□ -0.95
TTC28-203ENST00000442232 FBXO7Q9Y3I1 522 aa9.13□□□□□ -0.95
TTC28-203ENST00000442232 TRDCB7Z8K6 153 aa9.12□□□□□ -0.95
TTC28-203ENST00000442232 PDCD5O14737 125 aa9.12□□□□□ -0.95
TTC28-203ENST00000442232 CNIH1O95406 144 aa9.12□□□□□ -0.95
TTC28-203ENST00000442232 IGHV3-11P01762 117 aa9.12□□□□□ -0.95
TTC28-203ENST00000442232 SCTP09683 121 aa9.12□□□□□ -0.95
TTC28-203ENST00000442232 GADD45AP24522 165 aa9.12□□□□□ -0.95
TTC28-203ENST00000442232 AQP4P55087 323 aa9.12□□□□□ -0.95
TTC28-203ENST00000442232 MLLT11Q13015 90 aaPredicted RBP9.12□□□□□ -0.95
TTC28-203ENST00000442232 TPBGQ13641 420 aa9.12□□□□□ -0.95
TTC28-203ENST00000442232 IRF3Q14653 427 aa9.12□□□□□ -0.95
TTC28-203ENST00000442232 C19orf54Q5BKX5 351 aa9.12□□□□□ -0.95
TTC28-203ENST00000442232 ASPHD1Q5U4P2 390 aa9.12□□□□□ -0.95
TTC28-203ENST00000442232 ZNF562Q6V9R5 426 aa9.12□□□□□ -0.95
TTC28-203ENST00000442232 FAM89BQ8N5H3 189 aa9.12□□□□□ -0.95
TTC28-203ENST00000442232 DRAXINQ8NBI3 349 aaPredicted RBP9.12□□□□□ -0.95
TTC28-203ENST00000442232 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.12□□□□□ -0.95
TTC28-203ENST00000442232 LFNGQ8NES3 379 aa9.12□□□□□ -0.95
TTC28-203ENST00000442232 OR4A4PQ8NGN8 299 aa9.12□□□□□ -0.95
TTC28-203ENST00000442232 GRPEL2Q8TAA5 225 aa9.12□□□□□ -0.95
TTC28-203ENST00000442232 CASTOR1Q8WTX7 329 aa9.12□□□□□ -0.95
TTC28-203ENST00000442232 PTX4Q96A99 478 aa9.12□□□□□ -0.95
TTC28-203ENST00000442232 FAM3DQ96BQ1 224 aa9.12□□□□□ -0.95
TTC28-203ENST00000442232 MS4A10Q96PG2 267 aa9.12□□□□□ -0.95
TTC28-203ENST00000442232 OR4C12Q96R67 309 aa9.12□□□□□ -0.95
TTC28-203ENST00000442232 AGMATQ9BSE5 352 aa9.12□□□□□ -0.95
TTC28-203ENST00000442232 FAM103A1Q9BTL3 118 aaKnown RBP9.12□□□□□ -0.95
TTC28-203ENST00000442232 ELOVL1Q9BW60 279 aa9.12□□□□□ -0.95
TTC28-203ENST00000442232 ACOT13Q9NPJ3 140 aa9.12□□□□□ -0.95
TTC28-203ENST00000442232 SLC35D1Q9NTN3 355 aa9.12□□□□□ -0.95
TTC28-203ENST00000442232 RDH8Q9NYR8 311 aa9.12□□□□□ -0.95
TTC28-203ENST00000442232 RBM7Q9Y580 266 aaKnown RBP9.12□□□□□ -0.95
TTC28-203ENST00000442232 NUBP2Q9Y5Y2 271 aa9.12□□□□□ -0.95
TTC28-203ENST00000442232 DNAH9Q9NYC9 4486 aa9.11□□□□□ -0.95
TTC28-203ENST00000442232 IGHV4OR15-8A0A075B7B6 117 aa9.11□□□□□ -0.95
TTC28-203ENST00000442232 A0A087WW49 117 aa9.11□□□□□ -0.95
TTC28-203ENST00000442232 C13orf42A0A1B0GVH6 325 aa9.11□□□□□ -0.95
TTC28-203ENST00000442232 M0R1X1 148 aa9.11□□□□□ -0.95
TTC28-203ENST00000442232 BET1O15155 118 aa9.11□□□□□ -0.95
TTC28-203ENST00000442232 SLC25A17O43808 307 aa9.11□□□□□ -0.95
TTC28-203ENST00000442232 SOX15O60248 233 aa9.11□□□□□ -0.95
TTC28-203ENST00000442232 TRGV3P03979 118 aa9.11□□□□□ -0.95
TTC28-203ENST00000442232 HSPB1P04792 205 aaKnown RBP9.11□□□□□ -0.95
TTC28-203ENST00000442232 CD37P11049 281 aa9.11□□□□□ -0.95
TTC28-203ENST00000442232 MYL9P24844 172 aa9.11□□□□□ -0.95
TTC28-203ENST00000442232 CLDN12P56749 244 aa9.11□□□□□ -0.95
TTC28-203ENST00000442232 HES5Q5TA89 166 aa9.11□□□□□ -0.95
TTC28-203ENST00000442232 TMEM91Q6ZNR0 172 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms