RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 SVIPQ8NHG7 77 aa5.41□□□□□ -1.54
HDAC6-210ENST00000441703 OTOSQ8NHW6 89 aa5.41□□□□□ -1.54
HDAC6-210ENST00000441703 PPP1R14AQ96A00 147 aa5.41□□□□□ -1.54
HDAC6-210ENST00000441703 TMEM18Q96B42 140 aa5.41□□□□□ -1.54
HDAC6-210ENST00000441703 RASD2Q96D21 266 aa5.41□□□□□ -1.54
HDAC6-210ENST00000441703 RBMXL1Q96E39 390 aaKnown RBP5.41□□□□□ -1.54
HDAC6-210ENST00000441703 C1orf147Q96MC9 270 aaPredicted RBP5.41□□□□□ -1.54
HDAC6-210ENST00000441703 NIPSNAP3BQ9BS92 247 aa5.41□□□□□ -1.54
HDAC6-210ENST00000441703 LMF2Q9BU23 707 aaKnown RBP5.41□□□□□ -1.54
HDAC6-210ENST00000441703 MSL2Q9HCI7 577 aa5.41□□□□□ -1.54
HDAC6-210ENST00000441703 NECAP2Q9NVZ3 263 aa5.41□□□□□ -1.54
HDAC6-210ENST00000441703 TAS2R4Q9NYW5 299 aa5.41□□□□□ -1.54
HDAC6-210ENST00000441703 GSKIPQ9P0R6 139 aa5.41□□□□□ -1.54
HDAC6-210ENST00000441703 HHLA2Q9UM44 414 aa5.41□□□□□ -1.54
HDAC6-210ENST00000441703 IGKV3D-15A0A087WSY6 115 aa5.4□□□□□ -1.54
HDAC6-210ENST00000441703 IGHV3-15A0A0B4J1V0 119 aa5.4□□□□□ -1.54
HDAC6-210ENST00000441703 A0A1W2PN81 502 aa5.4□□□□□ -1.54
HDAC6-210ENST00000441703 CLPSL1A2RUU4 121 aa5.4□□□□□ -1.54
HDAC6-210ENST00000441703 ZNF705GA8MUZ8 300 aaPredicted RBP5.4□□□□□ -1.54
HDAC6-210ENST00000441703 TMEM14DPA8MWL7 114 aa5.4□□□□□ -1.54
HDAC6-210ENST00000441703 K7EP13 123 aa5.4□□□□□ -1.54
HDAC6-210ENST00000441703 EFNA2O43921 213 aa5.4□□□□□ -1.54
HDAC6-210ENST00000441703 CA11O75493 328 aa5.4□□□□□ -1.54
HDAC6-210ENST00000441703 NGFP01138 241 aa5.4□□□□□ -1.54
HDAC6-210ENST00000441703 IGKV1D-16P01601 117 aa5.4□□□□□ -1.54
HDAC6-210ENST00000441703 IGHV3-9P01782 118 aa5.4□□□□□ -1.54
HDAC6-210ENST00000441703 CRYAAP02489 173 aa5.4□□□□□ -1.54
HDAC6-210ENST00000441703 MBPP02686 304 aaPredicted RBP5.4□□□□□ -1.54
HDAC6-210ENST00000441703 CST2P09228 141 aa5.4□□□□□ -1.54
HDAC6-210ENST00000441703 QDPRP09417 244 aa5.4□□□□□ -1.54
HDAC6-210ENST00000441703 GATA3P23771 443 aa5.4□□□□□ -1.54
HDAC6-210ENST00000441703 GRPRP30550 384 aa5.4□□□□□ -1.54
HDAC6-210ENST00000441703 OR10J1P30954 320 aa5.4□□□□□ -1.54
HDAC6-210ENST00000441703 CHRNA7P36544 502 aa5.4□□□□□ -1.54
HDAC6-210ENST00000441703 PPP1CCP36873 323 aaKnown RBP5.4□□□□□ -1.54
HDAC6-210ENST00000441703 TAS2R46P59540 309 aa5.4□□□□□ -1.54
HDAC6-210ENST00000441703 CTXN1P60606 82 aa5.4□□□□□ -1.54
HDAC6-210ENST00000441703 RND3P61587 244 aa5.4□□□□□ -1.54
HDAC6-210ENST00000441703 RANP62826 216 aaKnown RBP5.4□□□□□ -1.54
HDAC6-210ENST00000441703 PAX5Q02548 391 aa5.4□□□□□ -1.54
HDAC6-210ENST00000441703 MFGE8Q08431 387 aaPredicted RBP5.4□□□□□ -1.54
HDAC6-210ENST00000441703 ICAM4Q14773 271 aa5.4□□□□□ -1.54
HDAC6-210ENST00000441703 ADIPOQQ15848 244 aa5.4□□□□□ -1.54
HDAC6-210ENST00000441703 GABRA6Q16445 453 aa5.4□□□□□ -1.54
HDAC6-210ENST00000441703 PDZD11Q5EBL8 140 aa5.4□□□□□ -1.54
HDAC6-210ENST00000441703 SLC18B1Q6NT16 456 aa5.4□□□□□ -1.54
HDAC6-210ENST00000441703 KCTD18Q6PI47 426 aaPredicted RBP5.4□□□□□ -1.54
HDAC6-210ENST00000441703 CENPVQ7Z7K6 275 aaPredicted RBP5.4□□□□□ -1.54
HDAC6-210ENST00000441703 THNSL2Q86YJ6 484 aa5.4□□□□□ -1.54
HDAC6-210ENST00000441703 WDR31Q8NA23 367 aa5.4□□□□□ -1.54
HDAC6-210ENST00000441703 TMEM104Q8NE00 496 aa5.4□□□□□ -1.54
HDAC6-210ENST00000441703 SLC24A4Q8NFF2 622 aa5.4□□□□□ -1.54
HDAC6-210ENST00000441703 OR13C9Q8NGT0 318 aa5.4□□□□□ -1.54
HDAC6-210ENST00000441703 OR5H2Q8NGV7 314 aa5.4□□□□□ -1.54
HDAC6-210ENST00000441703 OR6N2Q8NGY6 317 aa5.4□□□□□ -1.54
HDAC6-210ENST00000441703 NEK7Q8TDX7 302 aa5.4□□□□□ -1.54
HDAC6-210ENST00000441703 OIT3Q8WWZ8 545 aa5.4□□□□□ -1.54
HDAC6-210ENST00000441703 ERGIC1Q969X5 290 aa5.4□□□□□ -1.54
HDAC6-210ENST00000441703 APH1AQ96BI3 265 aa5.4□□□□□ -1.54
HDAC6-210ENST00000441703 SLC25A44Q96H78 314 aaPredicted RBP5.4□□□□□ -1.54
HDAC6-210ENST00000441703 IMMP2LQ96T52 175 aa5.4□□□□□ -1.54
HDAC6-210ENST00000441703 RARRES2Q99969 163 aa5.4□□□□□ -1.54
HDAC6-210ENST00000441703 KLHDC3Q9BQ90 382 aa5.4□□□□□ -1.54
HDAC6-210ENST00000441703 C20orf144Q9BQM9 153 aa5.4□□□□□ -1.54
HDAC6-210ENST00000441703 RIMS4Q9H426 269 aaPredicted RBP5.4□□□□□ -1.54
HDAC6-210ENST00000441703 ZNF665Q9H7R5 613 aa5.4□□□□□ -1.54
HDAC6-210ENST00000441703 SRA1Q9HD15 236 aaKnown RBP5.4□□□□□ -1.54
HDAC6-210ENST00000441703 AURKAIP1Q9NWT8 199 aaPredicted RBP5.4□□□□□ -1.54
HDAC6-210ENST00000441703 CGGBP1Q9UFW8 167 aaPredicted RBP5.4□□□□□ -1.54
HDAC6-210ENST00000441703 CHTOPQ9Y3Y2 248 aaKnown RBP5.4□□□□□ -1.54
HDAC6-210ENST00000441703 PCLOQ9Y6V0 5065 aa5.39□□□□□ -1.55
HDAC6-210ENST00000441703 A0A1B0GU03 582 aa5.39□□□□□ -1.55
HDAC6-210ENST00000441703 FAM230AA0A1W2PPH8 454 aa5.39□□□□□ -1.55
HDAC6-210ENST00000441703 A0A1W2PQD3 144 aa5.39□□□□□ -1.55
HDAC6-210ENST00000441703 C5orf63A6NC05 138 aa5.39□□□□□ -1.55
HDAC6-210ENST00000441703 A6NIZ1 184 aa5.39□□□□□ -1.55
HDAC6-210ENST00000441703 ZNF732B4DXR9 585 aa5.39□□□□□ -1.55
HDAC6-210ENST00000441703 ETV2O00321 342 aaPredicted RBP5.39□□□□□ -1.55
HDAC6-210ENST00000441703 WNT9BO14905 357 aa5.39□□□□□ -1.55
HDAC6-210ENST00000441703 HSPA12AO43301 675 aa5.39□□□□□ -1.55
HDAC6-210ENST00000441703 SRSF10O75494 262 aaKnown RBP5.39□□□□□ -1.55
HDAC6-210ENST00000441703 FSHBP01225 129 aa5.39□□□□□ -1.55
HDAC6-210ENST00000441703 CTSDP07339 412 aaPredicted RBP5.39□□□□□ -1.55
HDAC6-210ENST00000441703 PFN1P07737 140 aaKnown RBP5.39□□□□□ -1.55
HDAC6-210ENST00000441703 TMEM225BP0DP42 221 aa5.39□□□□□ -1.55
HDAC6-210ENST00000441703 PNMTP11086 282 aa5.39□□□□□ -1.55
HDAC6-210ENST00000441703 SELEP16581 610 aa5.39□□□□□ -1.55
HDAC6-210ENST00000441703 GLRA1P23415 457 aa5.39□□□□□ -1.55
HDAC6-210ENST00000441703 GABRA3P34903 492 aa5.39□□□□□ -1.55
HDAC6-210ENST00000441703 GNALP38405 381 aa5.39□□□□□ -1.55
HDAC6-210ENST00000441703 SUMO3P55854 103 aaPredicted RBP5.39□□□□□ -1.55
HDAC6-210ENST00000441703 MTCP1P56278 107 aa5.39□□□□□ -1.55
HDAC6-210ENST00000441703 LMO4P61968 165 aa5.39□□□□□ -1.55
HDAC6-210ENST00000441703 RBX1P62877 108 aa5.39□□□□□ -1.55
HDAC6-210ENST00000441703 PMS2P11Q13670 270 aa5.39□□□□□ -1.55
HDAC6-210ENST00000441703 PDCD1Q15116 288 aa5.39□□□□□ -1.55
HDAC6-210ENST00000441703 ZNF74Q16587 644 aa5.39□□□□□ -1.55
HDAC6-210ENST00000441703 MEP1BQ16820 701 aa5.39□□□□□ -1.55
HDAC6-210ENST00000441703 PCK2Q16822 640 aa5.39□□□□□ -1.55
HDAC6-210ENST00000441703 AADACL3Q5VUY0 350 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms