RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 SEC61A1P61619 476 aaKnown RBP3.85□□□□□ -1.79
PTPN4-206ENST00000441089 PAX5Q02548 391 aa3.85□□□□□ -1.79
PTPN4-206ENST00000441089 SSBP1Q04837 148 aaKnown RBP3.85□□□□□ -1.79
PTPN4-206ENST00000441089 DYRK1AQ13627 763 aa3.85□□□□□ -1.79
PTPN4-206ENST00000441089 EDDM3AQ14507 147 aa3.85□□□□□ -1.79
PTPN4-206ENST00000441089 ARL6IP1Q15041 203 aa3.85□□□□□ -1.79
PTPN4-206ENST00000441089 OXA1LQ15070 435 aa3.85□□□□□ -1.79
PTPN4-206ENST00000441089 HMGN3Q15651 99 aa3.85□□□□□ -1.79
PTPN4-206ENST00000441089 GRK1Q15835 563 aa3.85□□□□□ -1.79
PTPN4-206ENST00000441089 DEFB112Q30KQ8 113 aa3.85□□□□□ -1.79
PTPN4-206ENST00000441089 PLA1AQ53H76 456 aa3.85□□□□□ -1.79
PTPN4-206ENST00000441089 UTF1Q5T230 341 aa3.85□□□□□ -1.79
PTPN4-206ENST00000441089 SLC35E4Q6ICL7 350 aa3.85□□□□□ -1.79
PTPN4-206ENST00000441089 STEAP1BQ6NZ63 245 aa3.85□□□□□ -1.79
PTPN4-206ENST00000441089 C11orf88Q6PI97 169 aa3.85□□□□□ -1.79
PTPN4-206ENST00000441089 ZNF841Q6ZN19 808 aa3.85□□□□□ -1.79
PTPN4-206ENST00000441089 Q6ZS49 121 aa3.85□□□□□ -1.79
PTPN4-206ENST00000441089 NRARPQ7Z6K4 114 aa3.85□□□□□ -1.79
PTPN4-206ENST00000441089 CENPSQ8N2Z9 138 aa3.85□□□□□ -1.79
PTPN4-206ENST00000441089 ZNF561Q8N587 486 aa3.85□□□□□ -1.79
PTPN4-206ENST00000441089 ASCC1Q8N9N2 400 aaKnown RBP3.85□□□□□ -1.79
PTPN4-206ENST00000441089 BEND2Q8NDZ0 799 aa3.85□□□□□ -1.79
PTPN4-206ENST00000441089 TMEM185AQ8NFB2 350 aa3.85□□□□□ -1.79
PTPN4-206ENST00000441089 BEST4Q8NFU0 473 aa3.85□□□□□ -1.79
PTPN4-206ENST00000441089 OR13A1Q8NGR1 328 aa3.85□□□□□ -1.79
PTPN4-206ENST00000441089 OR56B4Q8NH76 319 aa3.85□□□□□ -1.79
PTPN4-206ENST00000441089 OR1L1Q8NH94 360 aa3.85□□□□□ -1.79
PTPN4-206ENST00000441089 UBALD1Q8TB05 177 aa3.85□□□□□ -1.79
PTPN4-206ENST00000441089 SETD6Q8TBK2 473 aa3.85□□□□□ -1.79
PTPN4-206ENST00000441089 NEK7Q8TDX7 302 aa3.85□□□□□ -1.79
PTPN4-206ENST00000441089 CCDC107Q8WV48 283 aa3.85□□□□□ -1.79
PTPN4-206ENST00000441089 MRGPRFQ96AM1 343 aa3.85□□□□□ -1.79
PTPN4-206ENST00000441089 CHMP1AQ9HD42 196 aaPredicted RBP3.85□□□□□ -1.79
PTPN4-206ENST00000441089 IFT46Q9NQC8 304 aa3.85□□□□□ -1.79
PTPN4-206ENST00000441089 KAAG1Q9UBP8 84 aa3.85□□□□□ -1.79
PTPN4-206ENST00000441089 GLS2Q9UI32 602 aa3.85□□□□□ -1.79
PTPN4-206ENST00000441089 ZNF107Q9UII5 783 aaPredicted RBP3.85□□□□□ -1.79
PTPN4-206ENST00000441089 KIF25Q9UIL4 384 aa3.85□□□□□ -1.79
PTPN4-206ENST00000441089 INSIG2Q9Y5U4 225 aa3.85□□□□□ -1.79
PTPN4-206ENST00000441089 MEIKINA0A087WXM9 373 aa3.84□□□□□ -1.79
PTPN4-206ENST00000441089 TRAV40A0A0B4J280 105 aa3.84□□□□□ -1.79
PTPN4-206ENST00000441089 A0A1B0GVG6 124 aa3.84□□□□□ -1.79
PTPN4-206ENST00000441089 MDFIC2A0A1B0GVS7 189 aa3.84□□□□□ -1.79
PTPN4-206ENST00000441089 ODAMA1E959 279 aa3.84□□□□□ -1.79
PTPN4-206ENST00000441089 NKX6-3A6NJ46 265 aa3.84□□□□□ -1.79
PTPN4-206ENST00000441089 VGLL3A8MV65 326 aa3.84□□□□□ -1.79
PTPN4-206ENST00000441089 ZNF736B4DX44 427 aaPredicted RBP3.84□□□□□ -1.79
PTPN4-206ENST00000441089 TRDCB7Z8K6 153 aa3.84□□□□□ -1.79
PTPN4-206ENST00000441089 C12orf77C9JDV5 145 aa3.84□□□□□ -1.79
PTPN4-206ENST00000441089 C15orf65H3BRN8 121 aa3.84□□□□□ -1.79
PTPN4-206ENST00000441089 H3BUI4 141 aa3.84□□□□□ -1.79
PTPN4-206ENST00000441089 SDCBPO00560 298 aaPredicted RBP3.84□□□□□ -1.79
PTPN4-206ENST00000441089 DVL1O14640 695 aa3.84□□□□□ -1.79
PTPN4-206ENST00000441089 FABP7O15540 132 aa3.84□□□□□ -1.79
PTPN4-206ENST00000441089 MMP23AO75900 390 aa3.84□□□□□ -1.79
PTPN4-206ENST00000441089 TSPAN9O75954 239 aa3.84□□□□□ -1.79
PTPN4-206ENST00000441089 DUS4LO95620 317 aaKnown RBP3.84□□□□□ -1.79
PTPN4-206ENST00000441089 RAB3DO95716 219 aa3.84□□□□□ -1.79
PTPN4-206ENST00000441089 ECDO95905 644 aaPredicted RBP3.84□□□□□ -1.79
PTPN4-206ENST00000441089 WNT2P09544 360 aa3.84□□□□□ -1.79
PTPN4-206ENST00000441089 AKAIN1P0CW23 69 aa3.84□□□□□ -1.79
PTPN4-206ENST00000441089 ERP29P30040 261 aaKnown RBP3.84□□□□□ -1.79
PTPN4-206ENST00000441089 SLC6A1P30531 599 aa3.84□□□□□ -1.79
PTPN4-206ENST00000441089 SSTR5P35346 364 aa3.84□□□□□ -1.79
PTPN4-206ENST00000441089 KCNJ3P48549 501 aa3.84□□□□□ -1.79
PTPN4-206ENST00000441089 INPP1P49441 399 aa3.84□□□□□ -1.79
PTPN4-206ENST00000441089 CCR6P51684 374 aa3.84□□□□□ -1.79
PTPN4-206ENST00000441089 P2RX3P56373 397 aa3.84□□□□□ -1.79
PTPN4-206ENST00000441089 BLOC1S1P78537 153 aa3.84□□□□□ -1.79
PTPN4-206ENST00000441089 HLA-DRB3P79483 266 aa3.84□□□□□ -1.79
PTPN4-206ENST00000441089 RBM39Q14498 530 aaKnown RBP3.84□□□□□ -1.79
PTPN4-206ENST00000441089 ZNF273Q14593 569 aa3.84□□□□□ -1.79
PTPN4-206ENST00000441089 CDK10Q15131 360 aa3.84□□□□□ -1.79
PTPN4-206ENST00000441089 SRSF7Q16629 238 aaKnown RBP eCLIP3.84□□□□□ -1.79
PTPN4-206ENST00000441089 C17orf58Q2M2W7 97 aa3.84□□□□□ -1.79
PTPN4-206ENST00000441089 RGS21Q2M5E4 152 aa3.84□□□□□ -1.79
PTPN4-206ENST00000441089 TMEM155Q4W5P6 130 aa3.84□□□□□ -1.79
PTPN4-206ENST00000441089 IGSF11Q5DX21 431 aa3.84□□□□□ -1.79
PTPN4-206ENST00000441089 KRBOX4Q5JUW0 171 aa3.84□□□□□ -1.79
PTPN4-206ENST00000441089 ZNF660Q6AZW8 331 aaPredicted RBP3.84□□□□□ -1.79
PTPN4-206ENST00000441089 Q6ZNX1 250 aa3.84□□□□□ -1.79
PTPN4-206ENST00000441089 Q6ZSV7 163 aa3.84□□□□□ -1.79
PTPN4-206ENST00000441089 OVCH2Q7RTZ1 564 aa3.84□□□□□ -1.79
PTPN4-206ENST00000441089 LHFPL1Q86WI0 220 aa3.84□□□□□ -1.79
PTPN4-206ENST00000441089 OR5AP2Q8NGF4 316 aa3.84□□□□□ -1.79
PTPN4-206ENST00000441089 OR13C8Q8NGS7 320 aa3.84□□□□□ -1.79
PTPN4-206ENST00000441089 MRGPRDQ8TDS7 321 aa3.84□□□□□ -1.79
PTPN4-206ENST00000441089 CHPT1Q8WUD6 406 aa3.84□□□□□ -1.79
PTPN4-206ENST00000441089 DPF1Q92782 380 aa3.84□□□□□ -1.79
PTPN4-206ENST00000441089 UPRTQ96BW1 309 aa3.84□□□□□ -1.79
PTPN4-206ENST00000441089 CABLES2Q9BTV7 478 aa3.84□□□□□ -1.79
PTPN4-206ENST00000441089 GPR61Q9BZJ8 451 aa3.84□□□□□ -1.79
PTPN4-206ENST00000441089 PARP12Q9H0J9 701 aaKnown RBP3.84□□□□□ -1.79
PTPN4-206ENST00000441089 FAM234AQ9H0X4 552 aa3.84□□□□□ -1.79
PTPN4-206ENST00000441089 DNTTIP1Q9H147 329 aa3.84□□□□□ -1.79
PTPN4-206ENST00000441089 MMP28Q9H239 520 aa3.84□□□□□ -1.79
PTPN4-206ENST00000441089 RIMS4Q9H426 269 aaPredicted RBP3.84□□□□□ -1.79
PTPN4-206ENST00000441089 PATZ1Q9HBE1 687 aaKnown RBP3.84□□□□□ -1.79
PTPN4-206ENST00000441089 ZNF286AQ9HBT8 521 aa3.84□□□□□ -1.79
PTPN4-206ENST00000441089 MMP26Q9NRE1 261 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms