RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 TAF15Q92804 592 aaKnown RBP eCLIP11.39□□□□□ -0.59
HERPUD1-204ENST00000439977 RPUSD4Q96CM3 377 aaKnown RBP11.39□□□□□ -0.59
HERPUD1-204ENST00000439977 TRIB1Q96RU8 372 aa11.39□□□□□ -0.59
HERPUD1-204ENST00000439977 SLC39A9Q9NUM3 307 aa11.39□□□□□ -0.59
HERPUD1-204ENST00000439977 ICE1Q9Y2F5 2266 aa11.39□□□□□ -0.59
HERPUD1-204ENST00000439977 OR5H1A6NKK0 313 aa11.39□□□□□ -0.59
HERPUD1-204ENST00000439977 ZG16O60844 167 aa11.39□□□□□ -0.59
HERPUD1-204ENST00000439977 HOXA5P20719 270 aa11.39□□□□□ -0.59
HERPUD1-204ENST00000439977 TNFRSF9Q07011 255 aa11.39□□□□□ -0.59
HERPUD1-204ENST00000439977 PYY3Q5JQD4 70 aa11.39□□□□□ -0.59
HERPUD1-204ENST00000439977 WDR25Q64LD2 544 aaPredicted RBP11.39□□□□□ -0.59
HERPUD1-204ENST00000439977 GALMQ96C23 342 aa11.39□□□□□ -0.59
HERPUD1-204ENST00000439977 ZNF737O75373 536 aa11.38□□□□□ -0.59
HERPUD1-204ENST00000439977 SLC25A6P12236 298 aa11.38□□□□□ -0.59
HERPUD1-204ENST00000439977 MAS1LP35410 378 aa11.38□□□□□ -0.59
HERPUD1-204ENST00000439977 ADIRFQ15847 76 aa11.38□□□□□ -0.59
HERPUD1-204ENST00000439977 C1QL4Q86Z23 238 aa11.38□□□□□ -0.59
HERPUD1-204ENST00000439977 OR10D4PQ8NGN7 298 aa11.38□□□□□ -0.59
HERPUD1-204ENST00000439977 FAM210BQ96KR6 192 aa11.38□□□□□ -0.59
HERPUD1-204ENST00000439977 FAM234AQ9H0X4 552 aa11.38□□□□□ -0.59
HERPUD1-204ENST00000439977 MBNL3Q9NUK0 354 aaKnown RBP11.38□□□□□ -0.59
HERPUD1-204ENST00000439977 KCNIP1Q9NZI2 227 aa11.38□□□□□ -0.59
HERPUD1-204ENST00000439977 CNOT1A5YKK6 2376 aaKnown RBP11.38□□□□□ -0.59
HERPUD1-204ENST00000439977 A0A087WWC5 75 aa11.38□□□□□ -0.59
HERPUD1-204ENST00000439977 MLNRO43193 412 aa11.38□□□□□ -0.59
HERPUD1-204ENST00000439977 HBZP02008 142 aa11.38□□□□□ -0.59
HERPUD1-204ENST00000439977 SOD3P08294 240 aa11.38□□□□□ -0.59
HERPUD1-204ENST00000439977 MRPL49Q13405 166 aaKnown RBP11.38□□□□□ -0.59
HERPUD1-204ENST00000439977 EDDM3AQ14507 147 aa11.38□□□□□ -0.59
HERPUD1-204ENST00000439977 ACSM6Q6P461 480 aa11.38□□□□□ -0.59
HERPUD1-204ENST00000439977 OR5T1Q8NG75 326 aa11.38□□□□□ -0.59
HERPUD1-204ENST00000439977 ABHD5Q8WTS1 349 aa11.38□□□□□ -0.59
HERPUD1-204ENST00000439977 FRZBQ92765 325 aa11.38□□□□□ -0.59
HERPUD1-204ENST00000439977 TCEAL7Q9BRU2 100 aa11.38□□□□□ -0.59
HERPUD1-204ENST00000439977 CADP27708 2225 aa11.37□□□□□ -0.59
HERPUD1-204ENST00000439977 ODAMA1E959 279 aa11.37□□□□□ -0.59
HERPUD1-204ENST00000439977 TUBG1P23258 451 aa11.37□□□□□ -0.59
HERPUD1-204ENST00000439977 SOX8P57073 446 aa11.37□□□□□ -0.59
HERPUD1-204ENST00000439977 BRWD1-AS2P59051 145 aa11.37□□□□□ -0.59
HERPUD1-204ENST00000439977 ZNF146Q15072 292 aa11.37□□□□□ -0.59
HERPUD1-204ENST00000439977 FAM209BQ5JX69 171 aa11.37□□□□□ -0.59
HERPUD1-204ENST00000439977 FER1L6-AS2Q96M78 137 aa11.37□□□□□ -0.59
HERPUD1-204ENST00000439977 OR51M1Q9H341 326 aa11.37□□□□□ -0.59
HERPUD1-204ENST00000439977 CISD1Q9NZ45 108 aaKnown RBP11.37□□□□□ -0.59
HERPUD1-204ENST00000439977 TTC28Q96AY4 2481 aa11.37□□□□□ -0.59
HERPUD1-204ENST00000439977 ST8SIA5O15466 376 aa11.37□□□□□ -0.59
HERPUD1-204ENST00000439977 TRGC1P0CF51 173 aa11.37□□□□□ -0.59
HERPUD1-204ENST00000439977 RAC2P15153 192 aa11.37□□□□□ -0.59
HERPUD1-204ENST00000439977 CDX1P47902 265 aaPredicted RBP11.37□□□□□ -0.59
HERPUD1-204ENST00000439977 CCL11P51671 97 aa11.37□□□□□ -0.59
HERPUD1-204ENST00000439977 TMEM41BQ5BJD5 291 aa11.37□□□□□ -0.59
HERPUD1-204ENST00000439977 C9orf152Q5JTZ5 239 aa11.37□□□□□ -0.59
HERPUD1-204ENST00000439977 DPPA3Q6W0C5 159 aa11.37□□□□□ -0.59
HERPUD1-204ENST00000439977 TRAV1-1A0A0B4J248 108 aa11.36□□□□□ -0.59
HERPUD1-204ENST00000439977 PCNX2A6NKB5 2137 aa11.36□□□□□ -0.59
HERPUD1-204ENST00000439977 NPIPB11E5RHQ5 1161 aa11.36□□□□□ -0.59
HERPUD1-204ENST00000439977 PTBP3O95758 552 aaKnown RBP11.36□□□□□ -0.59
HERPUD1-204ENST00000439977 S100A2P29034 98 aa11.36□□□□□ -0.59
HERPUD1-204ENST00000439977 TFF3Q07654 80 aa11.36□□□□□ -0.59
HERPUD1-204ENST00000439977 RTP5Q14D33 572 aa11.36□□□□□ -0.59
HERPUD1-204ENST00000439977 VWA1Q6PCB0 445 aa11.36□□□□□ -0.59
HERPUD1-204ENST00000439977 MOB1BQ7L9L4 216 aa11.36□□□□□ -0.59
HERPUD1-204ENST00000439977 SSX9Q7RTT3 188 aa11.36□□□□□ -0.59
HERPUD1-204ENST00000439977 CACNA1HO95180 2353 aa11.36□□□□□ -0.59
HERPUD1-204ENST00000439977 DMXL2Q8TDJ6 3036 aa11.36□□□□□ -0.59
HERPUD1-204ENST00000439977 HOXB1P14653 301 aaPredicted RBP11.36□□□□□ -0.59
HERPUD1-204ENST00000439977 TGFBR3Q03167 851 aa11.36□□□□□ -0.59
HERPUD1-204ENST00000439977 Q8IYB0 196 aa11.36□□□□□ -0.59
HERPUD1-204ENST00000439977 MBD3L1Q8WWY6 194 aa11.36□□□□□ -0.59
HERPUD1-204ENST00000439977 NINJ1Q92982 152 aa11.36□□□□□ -0.59
HERPUD1-204ENST00000439977 COQ2Q96H96 371 aa11.36□□□□□ -0.59
HERPUD1-204ENST00000439977 SMIM7Q9BQ49 75 aa11.36□□□□□ -0.59
HERPUD1-204ENST00000439977 SDF2L1Q9HCN8 221 aa11.36□□□□□ -0.59
HERPUD1-204ENST00000439977 GAR1Q9NY12 217 aaKnown RBP11.36□□□□□ -0.59
HERPUD1-204ENST00000439977 VAX2Q9UIW0 290 aa11.36□□□□□ -0.59
HERPUD1-204ENST00000439977 PSG11Q9UQ72 335 aa11.36□□□□□ -0.59
HERPUD1-204ENST00000439977 WIPI2Q9Y4P8 454 aa11.36□□□□□ -0.59
HERPUD1-204ENST00000439977 CACNA1GO43497 2377 aa11.36□□□□□ -0.59
HERPUD1-204ENST00000439977 COL27A1Q8IZC6 1860 aaPredicted RBP11.36□□□□□ -0.59
HERPUD1-204ENST00000439977 TMEM30CPA0ZSE6 113 aa11.36□□□□□ -0.59
HERPUD1-204ENST00000439977 NKX2-8O15522 239 aa11.36□□□□□ -0.59
HERPUD1-204ENST00000439977 SP9P0CG40 484 aa11.36□□□□□ -0.59
HERPUD1-204ENST00000439977 CD81P60033 236 aa11.36□□□□□ -0.59
HERPUD1-204ENST00000439977 NKX6-1P78426 367 aaPredicted RBP11.36□□□□□ -0.59
HERPUD1-204ENST00000439977 ZNF645Q8N7E2 425 aa11.36□□□□□ -0.59
HERPUD1-204ENST00000439977 SNX22Q96L94 193 aa11.36□□□□□ -0.59
HERPUD1-204ENST00000439977 AURKAIP1Q9NWT8 199 aaPredicted RBP11.36□□□□□ -0.59
HERPUD1-204ENST00000439977 LINC00473A8K010 186 aa11.35□□□□□ -0.59
HERPUD1-204ENST00000439977 CLDN34H7C241 214 aa11.35□□□□□ -0.59
HERPUD1-204ENST00000439977 FGF7P21781 194 aa11.35□□□□□ -0.59
HERPUD1-204ENST00000439977 Q3ZCU0 254 aa11.35□□□□□ -0.59
HERPUD1-204ENST00000439977 C11orf53Q8IXP5 236 aa11.35□□□□□ -0.59
HERPUD1-204ENST00000439977 OR13A1Q8NGR1 328 aa11.35□□□□□ -0.59
HERPUD1-204ENST00000439977 PSMG3Q9BT73 122 aaPredicted RBP11.35□□□□□ -0.59
HERPUD1-204ENST00000439977 SIRT7Q9NRC8 400 aa11.35□□□□□ -0.59
HERPUD1-204ENST00000439977 TREM2Q9NZC2 230 aa11.35□□□□□ -0.59
HERPUD1-204ENST00000439977 CEP250Q9BV73 2442 aa11.35□□□□□ -0.59
HERPUD1-204ENST00000439977 KMT2EQ8IZD2 1858 aa11.35□□□□□ -0.59
HERPUD1-204ENST00000439977 TIMM8AO60220 97 aaPredicted RBP11.35□□□□□ -0.59
HERPUD1-204ENST00000439977 FABP4P15090 132 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms