RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 RNF212BA8MTL3 300 aa12.47□□□□□ -0.41
CPSF7-205ENST00000439958 IGLV2-14P01704 120 aa12.47□□□□□ -0.41
CPSF7-205ENST00000439958 ZNF134P52741 427 aa12.47□□□□□ -0.41
CPSF7-205ENST00000439958 NDUFA5Q16718 116 aa12.47□□□□□ -0.41
CPSF7-205ENST00000439958 GPR146Q96CH1 333 aa12.47□□□□□ -0.41
CPSF7-205ENST00000439958 ABHD14AQ9BUJ0 271 aa12.47□□□□□ -0.41
CPSF7-205ENST00000439958 HINT2Q9BX68 163 aa12.47□□□□□ -0.41
CPSF7-205ENST00000439958 CLN8Q9UBY8 286 aa12.47□□□□□ -0.41
CPSF7-205ENST00000439958 NHLH2Q02577 135 aa12.46□□□□□ -0.41
CPSF7-205ENST00000439958 SLC25A24Q6NUK1 477 aa12.46□□□□□ -0.41
CPSF7-205ENST00000439958 LINC00473A8K010 186 aa12.46□□□□□ -0.41
CPSF7-205ENST00000439958 RPL7L1Q6DKI1 246 aaKnown RBP12.46□□□□□ -0.41
CPSF7-205ENST00000439958 TRAT1Q6PIZ9 186 aa12.46□□□□□ -0.41
CPSF7-205ENST00000439958 Q8TCH9 128 aa12.46□□□□□ -0.41
CPSF7-205ENST00000439958 CHST1O43916 411 aa12.46□□□□□ -0.42
CPSF7-205ENST00000439958 DEDDO75618 318 aa12.46□□□□□ -0.42
CPSF7-205ENST00000439958 NCR3LG1Q68D85 454 aa12.46□□□□□ -0.42
CPSF7-205ENST00000439958 TMEM65Q6PI78 240 aa12.46□□□□□ -0.42
CPSF7-205ENST00000439958 HSD17B11Q8NBQ5 300 aa12.46□□□□□ -0.42
CPSF7-205ENST00000439958 AKR1E2Q96JD6 320 aa12.46□□□□□ -0.42
CPSF7-205ENST00000439958 A0A1B0GV50 99 aa12.45□□□□□ -0.42
CPSF7-205ENST00000439958 H7C2Y5 167 aa12.45□□□□□ -0.42
CPSF7-205ENST00000439958 TMEM33P57088 247 aa12.45□□□□□ -0.42
CPSF7-205ENST00000439958 OR2B8PP59922 312 aa12.45□□□□□ -0.42
CPSF7-205ENST00000439958 RND3P61587 244 aa12.45□□□□□ -0.42
CPSF7-205ENST00000439958 C5orf30Q96GV9 206 aa12.45□□□□□ -0.42
CPSF7-205ENST00000439958 ZNF714Q96N38 554 aa12.45□□□□□ -0.42
CPSF7-205ENST00000439958 CTSZQ9UBR2 303 aa12.45□□□□□ -0.42
CPSF7-205ENST00000439958 FBXL17Q9UF56 701 aa12.45□□□□□ -0.42
CPSF7-205ENST00000439958 RAI1Q7Z5J4 1906 aaPredicted RBP12.45□□□□□ -0.42
CPSF7-205ENST00000439958 TFF3Q07654 80 aa12.45□□□□□ -0.42
CPSF7-205ENST00000439958 GSX2Q9BZM3 304 aa12.45□□□□□ -0.42
CPSF7-205ENST00000439958 SVEP1Q4LDE5 3571 aa12.45□□□□□ -0.42
CPSF7-205ENST00000439958 TNCP24821 2201 aa12.45□□□□□ -0.42
CPSF7-205ENST00000439958 A0A1W2PRD5 423 aa12.45□□□□□ -0.42
CPSF7-205ENST00000439958 A0A1W2PRF3 423 aa12.45□□□□□ -0.42
CPSF7-205ENST00000439958 A0A1W2PRM7 423 aa12.45□□□□□ -0.42
CPSF7-205ENST00000439958 E5RGE8 158 aa12.45□□□□□ -0.42
CPSF7-205ENST00000439958 C1QTNF12Q5T7M4 302 aa12.45□□□□□ -0.42
CPSF7-205ENST00000439958 Q6ZRM9 215 aa12.45□□□□□ -0.42
CPSF7-205ENST00000439958 H2BFWTQ7Z2G1 175 aa12.45□□□□□ -0.42
CPSF7-205ENST00000439958 OR10X1Q8NGY0 326 aa12.45□□□□□ -0.42
CPSF7-205ENST00000439958 BSCL2Q96G97 398 aaPredicted RBP12.45□□□□□ -0.42
CPSF7-205ENST00000439958 TMEM56Q96MV1 263 aa12.45□□□□□ -0.42
CPSF7-205ENST00000439958 GFOD1Q9NXC2 390 aa12.45□□□□□ -0.42
CPSF7-205ENST00000439958 JPT1Q9UK76 154 aa12.45□□□□□ -0.42
CPSF7-205ENST00000439958 TMEM56-RWDD3S4R434 201 aa12.45□□□□□ -0.42
CPSF7-205ENST00000439958 A0A1W2PPR1 153 aa12.44□□□□□ -0.42
CPSF7-205ENST00000439958 CRYZL1O95825 349 aa12.44□□□□□ -0.42
CPSF7-205ENST00000439958 CD55P08174 381 aa12.44□□□□□ -0.42
CPSF7-205ENST00000439958 COX7A1P24310 79 aa12.44□□□□□ -0.42
CPSF7-205ENST00000439958 MRPS11P82912 194 aaKnown RBP12.44□□□□□ -0.42
CPSF7-205ENST00000439958 TMEM267Q0VDI3 215 aaPredicted RBP12.44□□□□□ -0.42
CPSF7-205ENST00000439958 C17orf58Q2M2W7 97 aa12.44□□□□□ -0.42
CPSF7-205ENST00000439958 BBC3Q96PG8 261 aaPredicted RBP12.44□□□□□ -0.42
CPSF7-205ENST00000439958 NPIPB11E5RHQ5 1161 aa12.44□□□□□ -0.42
CPSF7-205ENST00000439958 IGKV1-39P01597 117 aa12.44□□□□□ -0.42
CPSF7-205ENST00000439958 IGKV1D-39P04432 117 aa12.44□□□□□ -0.42
CPSF7-205ENST00000439958 DAOP14920 347 aa12.44□□□□□ -0.42
CPSF7-205ENST00000439958 ZNF585BQ52M93 769 aa12.44□□□□□ -0.42
CPSF7-205ENST00000439958 TMEM200BQ69YZ2 307 aa12.44□□□□□ -0.42
CPSF7-205ENST00000439958 FAM222BQ8WU58 562 aa12.44□□□□□ -0.42
CPSF7-205ENST00000439958 CCDC168Q8NDH2 2452 aa12.44□□□□□ -0.42
CPSF7-205ENST00000439958 OPN1MWP04001 364 aa12.44□□□□□ -0.42
CPSF7-205ENST00000439958 OPN1MW2P0DN77 364 aa12.44□□□□□ -0.42
CPSF7-205ENST00000439958 OPN1MW3P0DN78 364 aa12.44□□□□□ -0.42
CPSF7-205ENST00000439958 HKR1P10072 659 aa12.44□□□□□ -0.42
CPSF7-205ENST00000439958 CT45A1Q5HYN5 189 aa12.44□□□□□ -0.42
CPSF7-205ENST00000439958 SPANXN5Q5MJ07 72 aa12.44□□□□□ -0.42
CPSF7-205ENST00000439958 CT45A3Q8NHU0 189 aa12.44□□□□□ -0.42
CPSF7-205ENST00000439958 CXorf58Q96LI9 332 aa12.44□□□□□ -0.42
CPSF7-205ENST00000439958 S1PR3Q99500 378 aa12.44□□□□□ -0.42
CPSF7-205ENST00000439958 GAL3ST2Q9H3Q3 398 aa12.44□□□□□ -0.42
CPSF7-205ENST00000439958 CBLN4Q9NTU7 201 aa12.44□□□□□ -0.42
CPSF7-205ENST00000439958 IFNA17P01571 189 aa12.43□□□□□ -0.42
CPSF7-205ENST00000439958 IGKV1-5P01602 117 aa12.43□□□□□ -0.42
CPSF7-205ENST00000439958 TPT1P13693 172 aaKnown RBP12.43□□□□□ -0.42
CPSF7-205ENST00000439958 UBA52P62987 128 aaKnown RBP12.43□□□□□ -0.42
CPSF7-205ENST00000439958 SRSF4Q08170 494 aaKnown RBP12.43□□□□□ -0.42
CPSF7-205ENST00000439958 EFNB3Q15768 340 aa12.43□□□□□ -0.42
CPSF7-205ENST00000439958 TEX36Q5VZQ5 186 aa12.43□□□□□ -0.42
CPSF7-205ENST00000439958 TIMD4Q96H15 378 aa12.43□□□□□ -0.42
CPSF7-205ENST00000439958 NARS2Q96I59 477 aaKnown RBP12.43□□□□□ -0.42
CPSF7-205ENST00000439958 IDI2-AS1Q9NZ38 188 aa12.43□□□□□ -0.42
CPSF7-205ENST00000439958 ONECUT1Q9UBC0 465 aa12.43□□□□□ -0.42
CPSF7-205ENST00000439958 SAA2-SAA4A0A096LPE2 208 aa12.43□□□□□ -0.42
CPSF7-205ENST00000439958 SAA2P0DJI9 122 aaPredicted RBP12.43□□□□□ -0.42
CPSF7-205ENST00000439958 HTD2P86397 168 aa12.43□□□□□ -0.42
CPSF7-205ENST00000439958 COMMD7Q86VX2 200 aa12.43□□□□□ -0.42
CPSF7-205ENST00000439958 LRTM2Q8N967 370 aa12.43□□□□□ -0.42
CPSF7-205ENST00000439958 PRELID3BQ9Y3B1 194 aa12.43□□□□□ -0.42
CPSF7-205ENST00000439958 F12P00748 615 aaPredicted RBP12.42□□□□□ -0.42
CPSF7-205ENST00000439958 SWI5Q1ZZU3 235 aa12.42□□□□□ -0.42
CPSF7-205ENST00000439958 RAB9BQ9NP90 201 aa12.42□□□□□ -0.42
CPSF7-205ENST00000439958 LOXL3P58215 753 aa12.42□□□□□ -0.42
CPSF7-205ENST00000439958 OR8G2PQ6IF36 304 aa12.42□□□□□ -0.42
CPSF7-205ENST00000439958 TCF23Q7RTU1 214 aa12.42□□□□□ -0.42
CPSF7-205ENST00000439958 SCARB1Q8WTV0 552 aa12.42□□□□□ -0.42
CPSF7-205ENST00000439958 DOPEY2Q9Y3R5 2298 aa12.42□□□□□ -0.42
CPSF7-205ENST00000439958 CEBPZOSA8MTT3 80 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms