RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 PTHLHP12272 177 aa9.4□□□□□ -0.9
HSPG2-206ENST00000439717 VDAC2P45880 294 aaPredicted RBP9.4□□□□□ -0.9
HSPG2-206ENST00000439717 Q6ZS46 218 aa9.4□□□□□ -0.9
HSPG2-206ENST00000439717 GVQW1Q8N7I0 195 aa9.4□□□□□ -0.9
HSPG2-206ENST00000439717 OR5AN1Q8NGI8 311 aa9.4□□□□□ -0.9
HSPG2-206ENST00000439717 C15orf40Q8WUR7 153 aa9.4□□□□□ -0.9
HSPG2-206ENST00000439717 OR2D2Q9H210 308 aa9.4□□□□□ -0.9
HSPG2-206ENST00000439717 SCPEP1Q9HB40 452 aa9.4□□□□□ -0.9
HSPG2-206ENST00000439717 IFT46Q9NQC8 304 aa9.4□□□□□ -0.9
HSPG2-206ENST00000439717 PLSCR3Q9NRY6 295 aa9.4□□□□□ -0.9
HSPG2-206ENST00000439717 LIN7CQ9NUP9 197 aaKnown RBP9.4□□□□□ -0.9
HSPG2-206ENST00000439717 NECAP2Q9NVZ3 263 aa9.4□□□□□ -0.9
HSPG2-206ENST00000439717 ANAPC10Q9UM13 185 aa9.4□□□□□ -0.9
HSPG2-206ENST00000439717 OR2W1Q9Y3N9 320 aa9.4□□□□□ -0.9
HSPG2-206ENST00000439717 RBM7Q9Y580 266 aaKnown RBP9.4□□□□□ -0.9
HSPG2-206ENST00000439717 NCBP2LA6PVI3 153 aaKnown RBP9.39□□□□□ -0.91
HSPG2-206ENST00000439717 H0YJW9 148 aa9.39□□□□□ -0.91
HSPG2-206ENST00000439717 SULT1C2O00338 296 aa9.39□□□□□ -0.91
HSPG2-206ENST00000439717 PROP1O75360 226 aa9.39□□□□□ -0.91
HSPG2-206ENST00000439717 RBBP9O75884 186 aa9.39□□□□□ -0.91
HSPG2-206ENST00000439717 SLC22A5O76082 557 aa9.39□□□□□ -0.91
HSPG2-206ENST00000439717 NAT1P18440 290 aa9.39□□□□□ -0.91
HSPG2-206ENST00000439717 LUMP51884 338 aaPredicted RBP9.39□□□□□ -0.91
HSPG2-206ENST00000439717 KRTAP10-3P60369 221 aa9.39□□□□□ -0.91
HSPG2-206ENST00000439717 ACTBP60709 375 aa9.39□□□□□ -0.91
HSPG2-206ENST00000439717 KLHDC1Q8N7A1 406 aa9.39□□□□□ -0.91
HSPG2-206ENST00000439717 Q8N9W7 124 aa9.39□□□□□ -0.91
HSPG2-206ENST00000439717 OR5AP2Q8NGF4 316 aa9.39□□□□□ -0.91
HSPG2-206ENST00000439717 SGMS2Q8NHU3 365 aa9.39□□□□□ -0.91
HSPG2-206ENST00000439717 SNAPC3Q92966 411 aa9.39□□□□□ -0.91
HSPG2-206ENST00000439717 RNF5Q99942 180 aa9.39□□□□□ -0.91
HSPG2-206ENST00000439717 RASL11BQ9BPW5 248 aa9.39□□□□□ -0.91
HSPG2-206ENST00000439717 WNT10AQ9GZT5 417 aa9.39□□□□□ -0.91
HSPG2-206ENST00000439717 SDHAF2Q9NX18 166 aa9.39□□□□□ -0.91
HSPG2-206ENST00000439717 ADAM30Q9UKF2 790 aa9.39□□□□□ -0.91
HSPG2-206ENST00000439717 MRPS7Q9Y2R9 242 aaKnown RBP9.39□□□□□ -0.91
HSPG2-206ENST00000439717 WASHC3Q9Y3C0 194 aa9.39□□□□□ -0.91
HSPG2-206ENST00000439717 ZNF701M0R085 212 aaPredicted RBP9.38□□□□□ -0.91
HSPG2-206ENST00000439717 M0R1X1 148 aa9.38□□□□□ -0.91
HSPG2-206ENST00000439717 RGS5O15539 181 aa9.38□□□□□ -0.91
HSPG2-206ENST00000439717 TUSC2O75896 110 aa9.38□□□□□ -0.91
HSPG2-206ENST00000439717 APOA2P02652 100 aa9.38□□□□□ -0.91
HSPG2-206ENST00000439717 VSIG10L2P0DP72 767 aa9.38□□□□□ -0.91
HSPG2-206ENST00000439717 NFYAP23511 347 aaPredicted RBP9.38□□□□□ -0.91
HSPG2-206ENST00000439717 TAGLNQ01995 201 aaKnown RBP9.38□□□□□ -0.91
HSPG2-206ENST00000439717 CDK10Q15131 360 aa9.38□□□□□ -0.91
HSPG2-206ENST00000439717 C9orf152Q5JTZ5 239 aa9.38□□□□□ -0.91
HSPG2-206ENST00000439717 FAM131AQ6UXB0 335 aa9.38□□□□□ -0.91
HSPG2-206ENST00000439717 GLDNQ6ZMI3 551 aaPredicted RBP9.38□□□□□ -0.91
HSPG2-206ENST00000439717 FAM71E2Q8N5Q1 922 aa9.38□□□□□ -0.91
HSPG2-206ENST00000439717 ZNF645Q8N7E2 425 aa9.38□□□□□ -0.91
HSPG2-206ENST00000439717 ZNF383Q8NA42 475 aa9.38□□□□□ -0.91
HSPG2-206ENST00000439717 NPBQ8NG41 125 aa9.38□□□□□ -0.91
HSPG2-206ENST00000439717 GPX8Q8TED1 209 aa9.38□□□□□ -0.91
HSPG2-206ENST00000439717 ADTRPQ96IZ2 230 aa9.38□□□□□ -0.91
HSPG2-206ENST00000439717 EXTL2Q9UBQ6 330 aa9.38□□□□□ -0.91
HSPG2-206ENST00000439717 MEIS3P1A6NDR6 274 aa9.37□□□□□ -0.91
HSPG2-206ENST00000439717 CCDC160A6NGH7 325 aa9.37□□□□□ -0.91
HSPG2-206ENST00000439717 SH2D7A6NKC9 451 aaPredicted RBP9.37□□□□□ -0.91
HSPG2-206ENST00000439717 H7C2Y5 167 aa9.37□□□□□ -0.91
HSPG2-206ENST00000439717 KCNAB3O43448 404 aa9.37□□□□□ -0.91
HSPG2-206ENST00000439717 IGHG2P01859 326 aa9.37□□□□□ -0.91
HSPG2-206ENST00000439717 OR5H8P0DN80 308 aa9.37□□□□□ -0.91
HSPG2-206ENST00000439717 FCGR2CP31995 323 aa9.37□□□□□ -0.91
HSPG2-206ENST00000439717 THBS3P49746 956 aa9.37□□□□□ -0.91
HSPG2-206ENST00000439717 F2RL1P55085 397 aa9.37□□□□□ -0.91
HSPG2-206ENST00000439717 TAS2R46P59540 309 aa9.37□□□□□ -0.91
HSPG2-206ENST00000439717 SRSF4Q08170 494 aaKnown RBP9.37□□□□□ -0.91
HSPG2-206ENST00000439717 MMDQ15546 238 aa9.37□□□□□ -0.91
HSPG2-206ENST00000439717 PDPNQ86YL7 162 aa9.37□□□□□ -0.91
HSPG2-206ENST00000439717 SNX29P2Q8IUI4 249 aa9.37□□□□□ -0.91
HSPG2-206ENST00000439717 DRAXINQ8NBI3 349 aaPredicted RBP9.37□□□□□ -0.91
HSPG2-206ENST00000439717 WIPF2Q8TF74 440 aaPredicted RBP9.37□□□□□ -0.91
HSPG2-206ENST00000439717 GIMAP1Q8WWP7 306 aa9.37□□□□□ -0.91
HSPG2-206ENST00000439717 SLIRPQ9GZT3 109 aaKnown RBP9.37□□□□□ -0.91
HSPG2-206ENST00000439717 RBM38Q9H0Z9 239 aaKnown RBP9.37□□□□□ -0.91
HSPG2-206ENST00000439717 MIXL1Q9H2W2 232 aa9.37□□□□□ -0.91
HSPG2-206ENST00000439717 KIAA1456Q9P272 454 aa9.37□□□□□ -0.91
HSPG2-206ENST00000439717 RABL2AQ9UBK7 228 aaPredicted RBP9.37□□□□□ -0.91
HSPG2-206ENST00000439717 RSL24D1Q9UHA3 163 aaKnown RBP9.37□□□□□ -0.91
HSPG2-206ENST00000439717 RABL2BQ9UNT1 228 aa9.37□□□□□ -0.91
HSPG2-206ENST00000439717 CTDSP2O14595 271 aa9.36□□□□□ -0.91
HSPG2-206ENST00000439717 NBR2O15453 112 aa9.36□□□□□ -0.91
HSPG2-206ENST00000439717 NDUFA3O95167 84 aa9.36□□□□□ -0.91
HSPG2-206ENST00000439717 RRASP10301 218 aa9.36□□□□□ -0.91
HSPG2-206ENST00000439717 RCVRNP35243 200 aa9.36□□□□□ -0.91
HSPG2-206ENST00000439717 CBX3Q13185 183 aa9.36□□□□□ -0.91
HSPG2-206ENST00000439717 MSMO1Q15800 293 aa9.36□□□□□ -0.91
HSPG2-206ENST00000439717 TMEM95Q3KNT9 176 aa9.36□□□□□ -0.91
HSPG2-206ENST00000439717 OVCH2Q7RTZ1 564 aa9.36□□□□□ -0.91
HSPG2-206ENST00000439717 SLC35E3Q7Z769 313 aa9.36□□□□□ -0.91
HSPG2-206ENST00000439717 CENPVQ7Z7K6 275 aaPredicted RBP9.36□□□□□ -0.91
HSPG2-206ENST00000439717 FOXRED2Q8IWF2 684 aa9.36□□□□□ -0.91
HSPG2-206ENST00000439717 LAX1Q8IWV1 398 aa9.36□□□□□ -0.91
HSPG2-206ENST00000439717 OR5H2Q8NGV7 314 aa9.36□□□□□ -0.91
HSPG2-206ENST00000439717 C5orf30Q96GV9 206 aa9.36□□□□□ -0.91
HSPG2-206ENST00000439717 RITA1Q96K30 269 aa9.36□□□□□ -0.91
HSPG2-206ENST00000439717 SLC35D1Q9NTN3 355 aa9.36□□□□□ -0.91
HSPG2-206ENST00000439717 IGKV1D-13A0A0B4J2D9 117 aa9.35□□□□□ -0.91
HSPG2-206ENST00000439717 J3QRK9 145 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms