RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 RNF151Q2KHN1 245 aa7.27□□□□□ -1.25
HPS4-206ENST00000439453 ANKRD37Q7Z713 158 aa7.27□□□□□ -1.25
HPS4-206ENST00000439453 IMMP1LQ96LU5 166 aa7.27□□□□□ -1.25
HPS4-206ENST00000439453 ZNF385AQ96PM9 386 aaKnown RBP7.27□□□□□ -1.25
HPS4-206ENST00000439453 PSENENQ9NZ42 101 aa7.27□□□□□ -1.25
HPS4-206ENST00000439453 SLC25A6P12236 298 aa7.26□□□□□ -1.25
HPS4-206ENST00000439453 IRF2P14316 349 aa7.26□□□□□ -1.25
HPS4-206ENST00000439453 PRDX4Q13162 271 aa7.26□□□□□ -1.25
HPS4-206ENST00000439453 TMEM256Q8N2U0 113 aa7.26□□□□□ -1.25
HPS4-206ENST00000439453 PSMF1Q92530 271 aa7.26□□□□□ -1.25
HPS4-206ENST00000439453 WDR61Q9GZS3 305 aaKnown RBP7.26□□□□□ -1.25
HPS4-206ENST00000439453 PRRC2CQ9Y520 2896 aaKnown RBP7.26□□□□□ -1.25
HPS4-206ENST00000439453 CYC1P08574 325 aa7.26□□□□□ -1.25
HPS4-206ENST00000439453 F2RP25116 425 aa7.26□□□□□ -1.25
HPS4-206ENST00000439453 HBG1P69891 147 aa7.26□□□□□ -1.25
HPS4-206ENST00000439453 HBG2P69892 147 aa7.26□□□□□ -1.25
HPS4-206ENST00000439453 COTL1Q14019 142 aa7.26□□□□□ -1.25
HPS4-206ENST00000439453 LY6DQ14210 128 aa7.26□□□□□ -1.25
HPS4-206ENST00000439453 PLCXD3Q63HM9 321 aa7.26□□□□□ -1.25
HPS4-206ENST00000439453 KCNIP4Q6PIL6 250 aa7.26□□□□□ -1.25
HPS4-206ENST00000439453 Q6ZRM9 215 aa7.26□□□□□ -1.25
HPS4-206ENST00000439453 OR4F5Q8NH21 305 aa7.26□□□□□ -1.25
HPS4-206ENST00000439453 ZNF837Q96EG3 531 aaPredicted RBP7.26□□□□□ -1.25
HPS4-206ENST00000439453 OR4F4Q96R69 305 aa7.26□□□□□ -1.25
HPS4-206ENST00000439453 REPIN1Q9BWE0 567 aaKnown RBP7.26□□□□□ -1.25
HPS4-206ENST00000439453 A0A1B0GUS0 222 aa7.26□□□□□ -1.25
HPS4-206ENST00000439453 SYNGR2O43760 224 aa7.26□□□□□ -1.25
HPS4-206ENST00000439453 LILRA1O75019 489 aa7.26□□□□□ -1.25
HPS4-206ENST00000439453 IGKV1D-33P01593 117 aa7.26□□□□□ -1.25
HPS4-206ENST00000439453 IGKV1-33P01594 117 aa7.26□□□□□ -1.25
HPS4-206ENST00000439453 MRPS11P82912 194 aaKnown RBP7.26□□□□□ -1.25
HPS4-206ENST00000439453 ARSJQ5FYB0 599 aaPredicted RBP7.26□□□□□ -1.25
HPS4-206ENST00000439453 RPP25LQ8N5L8 163 aaKnown RBP7.26□□□□□ -1.25
HPS4-206ENST00000439453 OR4C12Q96R67 309 aa7.26□□□□□ -1.25
HPS4-206ENST00000439453 DIRC2Q96SL1 478 aa7.26□□□□□ -1.25
HPS4-206ENST00000439453 OPN3Q9H1Y3 402 aaPredicted RBP7.26□□□□□ -1.25
HPS4-206ENST00000439453 PLA2G3Q9NZ20 509 aa7.26□□□□□ -1.25
HPS4-206ENST00000439453 TLN1Q9Y490 2541 aaKnown RBP7.26□□□□□ -1.25
HPS4-206ENST00000439453 ARHGAP21Q5T5U3 1957 aa7.26□□□□□ -1.25
HPS4-206ENST00000439453 FAM208BQ5VWN6 2430 aa7.26□□□□□ -1.25
HPS4-206ENST00000439453 NCKAP5O14513 1909 aa7.26□□□□□ -1.25
HPS4-206ENST00000439453 IGHV3-15A0A0B4J1V0 119 aa7.25□□□□□ -1.25
HPS4-206ENST00000439453 HMGB3O15347 200 aaKnown RBP7.25□□□□□ -1.25
HPS4-206ENST00000439453 SYNGR3O43761 229 aa7.25□□□□□ -1.25
HPS4-206ENST00000439453 NUPR1O60356 82 aa7.25□□□□□ -1.25
HPS4-206ENST00000439453 SERPINE2P07093 398 aa7.25□□□□□ -1.25
HPS4-206ENST00000439453 IL3RAP26951 378 aa7.25□□□□□ -1.25
HPS4-206ENST00000439453 RPL15P61313 204 aaKnown RBP7.25□□□□□ -1.25
HPS4-206ENST00000439453 FAM27BQ5VT28 67 aa7.25□□□□□ -1.25
HPS4-206ENST00000439453 CALHM1Q8IU99 346 aa7.25□□□□□ -1.25
HPS4-206ENST00000439453 FDCSPQ8NFU4 85 aa7.25□□□□□ -1.25
HPS4-206ENST00000439453 PIGCQ92535 297 aa7.25□□□□□ -1.25
HPS4-206ENST00000439453 SDSLQ96GA7 329 aa7.25□□□□□ -1.25
HPS4-206ENST00000439453 RASL10BQ96S79 203 aa7.25□□□□□ -1.25
HPS4-206ENST00000439453 ULBP2Q9BZM5 246 aa7.25□□□□□ -1.25
HPS4-206ENST00000439453 CACNG5Q9UF02 275 aa7.25□□□□□ -1.25
HPS4-206ENST00000439453 TRAPPC1Q9Y5R8 145 aa7.25□□□□□ -1.25
HPS4-206ENST00000439453 NPIPA2E9PIF3 369 aa7.25□□□□□ -1.25
HPS4-206ENST00000439453 NPIPA3F8WFD2 350 aa7.25□□□□□ -1.25
HPS4-206ENST00000439453 NAPSAO96009 420 aa7.25□□□□□ -1.25
HPS4-206ENST00000439453 PRB1P04280 392 aa7.25□□□□□ -1.25
HPS4-206ENST00000439453 PSG2P11465 335 aa7.25□□□□□ -1.25
HPS4-206ENST00000439453 BRS3P32247 399 aa7.25□□□□□ -1.25
HPS4-206ENST00000439453 LCN2P80188 198 aa7.25□□□□□ -1.25
HPS4-206ENST00000439453 SRSF7Q16629 238 aaKnown RBP eCLIP7.25□□□□□ -1.25
HPS4-206ENST00000439453 FAM78BQ5VT40 261 aa7.25□□□□□ -1.25
HPS4-206ENST00000439453 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.25□□□□□ -1.25
HPS4-206ENST00000439453 ZNF611Q8N823 705 aa7.25□□□□□ -1.25
HPS4-206ENST00000439453 OR51H1Q8NH63 302 aa7.25□□□□□ -1.25
HPS4-206ENST00000439453 OR1F12Q8NHA8 337 aa7.25□□□□□ -1.25
HPS4-206ENST00000439453 GATAD1Q8WUU5 269 aa7.25□□□□□ -1.25
HPS4-206ENST00000439453 TAF15Q92804 592 aaKnown RBP eCLIP7.25□□□□□ -1.25
HPS4-206ENST00000439453 IMMP2LQ96T52 175 aa7.25□□□□□ -1.25
HPS4-206ENST00000439453 MIEN1Q9BRT3 115 aa7.25□□□□□ -1.25
HPS4-206ENST00000439453 LPAR2Q9HBW0 351 aa7.25□□□□□ -1.25
HPS4-206ENST00000439453 IGKV1-6A0A0C4DH72 117 aa7.25□□□□□ -1.25
HPS4-206ENST00000439453 A0A0U1RQK1 487 aa7.25□□□□□ -1.25
HPS4-206ENST00000439453 CHRNA7P36544 502 aa7.25□□□□□ -1.25
HPS4-206ENST00000439453 CST9LP1Q5W188 147 aa7.25□□□□□ -1.25
HPS4-206ENST00000439453 LRP11Q86VZ4 500 aa7.25□□□□□ -1.25
HPS4-206ENST00000439453 C20orf144Q9BQM9 153 aa7.25□□□□□ -1.25
HPS4-206ENST00000439453 PARD6GQ9BYG4 376 aaPredicted RBP7.25□□□□□ -1.25
HPS4-206ENST00000439453 ZNF552Q9H707 407 aaPredicted RBP7.25□□□□□ -1.25
HPS4-206ENST00000439453 UBE2L5PA0A1B0GUS4 154 aa7.24□□□□□ -1.25
HPS4-206ENST00000439453 ZNF320A2RRD8 509 aa7.24□□□□□ -1.25
HPS4-206ENST00000439453 CD300LBA8K4G0 201 aa7.24□□□□□ -1.25
HPS4-206ENST00000439453 TNFSF13O75888 250 aa7.24□□□□□ -1.25
HPS4-206ENST00000439453 SELEP16581 610 aa7.24□□□□□ -1.25
HPS4-206ENST00000439453 GCH1P30793 250 aa7.24□□□□□ -1.25
HPS4-206ENST00000439453 DMRTA1Q5VZB9 504 aa7.24□□□□□ -1.25
HPS4-206ENST00000439453 ETFRF1Q6IPR1 90 aa7.24□□□□□ -1.25
HPS4-206ENST00000439453 PRR18Q8N4B5 295 aa7.24□□□□□ -1.25
HPS4-206ENST00000439453 ABHD17AQ96GS6 310 aa7.24□□□□□ -1.25
HPS4-206ENST00000439453 SLC25A22Q9H936 323 aa7.24□□□□□ -1.25
HPS4-206ENST00000439453 PATZ1Q9HBE1 687 aaKnown RBP7.24□□□□□ -1.25
HPS4-206ENST00000439453 UBR5O95071 2799 aaPredicted RBP7.24□□□□□ -1.25
HPS4-206ENST00000439453 KIR2DS1A0A191URI9 304 aa7.24□□□□□ -1.25
HPS4-206ENST00000439453 VENTXO95231 258 aa7.24□□□□□ -1.25
HPS4-206ENST00000439453 IGHEP01854 428 aa7.24□□□□□ -1.25
HPS4-206ENST00000439453 CTXN2P0C2S0 81 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms