RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 AKR1C4P17516 323 aa16.82■□□□□ 0.28
CHD3-204ENST00000439235 ANXA7P20073 488 aaKnown RBP16.82■□□□□ 0.28
CHD3-204ENST00000439235 CATR1Q13166 79 aa16.82■□□□□ 0.28
CHD3-204ENST00000439235 MIDNQ504T8 468 aa16.82■□□□□ 0.28
CHD3-204ENST00000439235 RPL39P5Q59GN2 51 aa16.82■□□□□ 0.28
CHD3-204ENST00000439235 ZNF833PQ6ZTB9 187 aa16.82■□□□□ 0.28
CHD3-204ENST00000439235 SGPP2Q8IWX5 399 aa16.82■□□□□ 0.28
CHD3-204ENST00000439235 TEX29Q8N6K0 151 aa16.82■□□□□ 0.28
CHD3-204ENST00000439235 ADAD2Q8NCV1 583 aaKnown RBP16.82■□□□□ 0.28
CHD3-204ENST00000439235 RTN4IP1Q8WWV3 396 aaPredicted RBP16.82■□□□□ 0.28
CHD3-204ENST00000439235 HSD17B10Q99714 261 aaKnown RBP16.82■□□□□ 0.28
CHD3-204ENST00000439235 DPM3Q9P2X0 92 aa16.82■□□□□ 0.28
CHD3-204ENST00000439235 ARHGAP32A7KAX9 2087 aa16.81■□□□□ 0.28
CHD3-204ENST00000439235 IGHV1-69DA0A0B4J2H0 117 aa16.81■□□□□ 0.28
CHD3-204ENST00000439235 TEX13DA0A0J9YY54 714 aaPredicted RBP16.81■□□□□ 0.28
CHD3-204ENST00000439235 A0A1W2PRD5 423 aa16.81■□□□□ 0.28
CHD3-204ENST00000439235 A0A1W2PRF3 423 aa16.81■□□□□ 0.28
CHD3-204ENST00000439235 A0A1W2PRM7 423 aa16.81■□□□□ 0.28
CHD3-204ENST00000439235 CRYM-AS1A6NIL9 109 aa16.81■□□□□ 0.28
CHD3-204ENST00000439235 LEUTXA8MZ59 168 aa16.81■□□□□ 0.28
CHD3-204ENST00000439235 TXNL1O43396 289 aa16.81■□□□□ 0.28
CHD3-204ENST00000439235 TNFSF12O43508 249 aa16.81■□□□□ 0.28
CHD3-204ENST00000439235 PGLYRP1O75594 196 aaPredicted RBP16.81■□□□□ 0.28
CHD3-204ENST00000439235 IGHV1-69P01742 117 aa16.81■□□□□ 0.28
CHD3-204ENST00000439235 TMEM128Q5BJH2 165 aa16.81■□□□□ 0.28
CHD3-204ENST00000439235 TBC1D26Q86UD7 250 aa16.81■□□□□ 0.28
CHD3-204ENST00000439235 ST6GALNAC6Q969X2 333 aa16.81■□□□□ 0.28
CHD3-204ENST00000439235 TMEM230Q96A57 120 aa16.81■□□□□ 0.28
CHD3-204ENST00000439235 RPEQ96AT9 228 aa16.81■□□□□ 0.28
CHD3-204ENST00000439235 C5orf30Q96GV9 206 aa16.81■□□□□ 0.28
CHD3-204ENST00000439235 ADTRPQ96IZ2 230 aa16.81■□□□□ 0.28
CHD3-204ENST00000439235 ZNF251Q9BRH9 671 aa16.81■□□□□ 0.28
CHD3-204ENST00000439235 NAA60Q9H7X0 242 aa16.81■□□□□ 0.28
CHD3-204ENST00000439235 NPFFO15130 113 aa16.8■□□□□ 0.28
CHD3-204ENST00000439235 MPPED1O15442 326 aa16.8■□□□□ 0.28
CHD3-204ENST00000439235 IL5P05113 134 aa16.8■□□□□ 0.28
CHD3-204ENST00000439235 OR4E1P0C645 316 aa16.8■□□□□ 0.28
CHD3-204ENST00000439235 THBS3P49746 956 aa16.8■□□□□ 0.28
CHD3-204ENST00000439235 C4orf46Q504U0 113 aa16.8■□□□□ 0.28
CHD3-204ENST00000439235 TPTE2P1Q5T6R2 138 aa16.8■□□□□ 0.28
CHD3-204ENST00000439235 KCTD9Q7L273 389 aa16.8■□□□□ 0.28
CHD3-204ENST00000439235 TGIF2LXQ8IUE1 241 aa16.8■□□□□ 0.28
CHD3-204ENST00000439235 BEX2Q9BXY8 128 aa16.8■□□□□ 0.28
CHD3-204ENST00000439235 BEX1Q9HBH7 125 aa16.8■□□□□ 0.28
CHD3-204ENST00000439235 LIN7CQ9NUP9 197 aaKnown RBP16.8■□□□□ 0.28
CHD3-204ENST00000439235 OOSP1A8MZH6 123 aa16.79■□□□□ 0.28
CHD3-204ENST00000439235 B3GALNT1O75752 331 aa16.79■□□□□ 0.28
CHD3-204ENST00000439235 AVPP01185 164 aa16.79■□□□□ 0.28
CHD3-204ENST00000439235 GAPDHP04406 335 aaKnown RBP16.79■□□□□ 0.28
CHD3-204ENST00000439235 VSIG10L2P0DP72 767 aa16.79■□□□□ 0.28
CHD3-204ENST00000439235 EPHA1P21709 976 aa16.79■□□□□ 0.28
CHD3-204ENST00000439235 VAMP1P23763 118 aa16.79■□□□□ 0.28
CHD3-204ENST00000439235 DHODHQ02127 395 aa16.79■□□□□ 0.28
CHD3-204ENST00000439235 KRTAP1-1Q07627 177 aa16.79■□□□□ 0.28
CHD3-204ENST00000439235 ZNF816Q0VGE8 651 aaPredicted RBP16.79■□□□□ 0.28
CHD3-204ENST00000439235 EIF4EBP1Q13541 118 aaPredicted RBP16.79■□□□□ 0.28
CHD3-204ENST00000439235 TCTEX1D2Q8WW35 142 aa16.79■□□□□ 0.28
CHD3-204ENST00000439235 CAPSLQ8WWF8 208 aa16.79■□□□□ 0.28
CHD3-204ENST00000439235 GPN1Q9HCN4 374 aaPredicted RBP16.79■□□□□ 0.28
CHD3-204ENST00000439235 KCNIP3Q9Y2W7 256 aa16.79■□□□□ 0.28
CHD3-204ENST00000439235 C2CD3Q4AC94 2353 aa16.79■□□□□ 0.28
CHD3-204ENST00000439235 LY6LH3BQJ8 138 aa16.78■□□□□ 0.28
CHD3-204ENST00000439235 PROP1O75360 226 aa16.78■□□□□ 0.28
CHD3-204ENST00000439235 HLA-AP01891 365 aaKnown RBP16.78■□□□□ 0.28
CHD3-204ENST00000439235 ANXA3P12429 323 aa16.78■□□□□ 0.28
CHD3-204ENST00000439235 F2RP25116 425 aa16.78■□□□□ 0.28
CHD3-204ENST00000439235 DUTP33316 252 aaKnown RBP16.78■□□□□ 0.28
CHD3-204ENST00000439235 SAA4P35542 130 aa16.78■□□□□ 0.28
CHD3-204ENST00000439235 BPIFB3P59826 476 aa16.78■□□□□ 0.28
CHD3-204ENST00000439235 PPP1R1AQ13522 171 aa16.78■□□□□ 0.28
CHD3-204ENST00000439235 TATDN3Q17R31 274 aa16.78■□□□□ 0.28
CHD3-204ENST00000439235 CCDC144NLQ6NUI1 221 aa16.78■□□□□ 0.28
CHD3-204ENST00000439235 GLDNQ6ZMI3 551 aaPredicted RBP16.78■□□□□ 0.28
CHD3-204ENST00000439235 TCTEX1D1Q8N7M0 179 aa16.78■□□□□ 0.28
CHD3-204ENST00000439235 OR51H1Q8NH63 302 aa16.78■□□□□ 0.28
CHD3-204ENST00000439235 PRELID3BQ9Y3B1 194 aa16.78■□□□□ 0.28
CHD3-204ENST00000439235 C3orf85A0A1B0GTC6 90 aa16.77■□□□□ 0.28
CHD3-204ENST00000439235 H0Y980 276 aa16.77■□□□□ 0.28
CHD3-204ENST00000439235 SFT2D2O95562 160 aa16.77■□□□□ 0.28
CHD3-204ENST00000439235 IGHV4-38-2P0DP08 117 aa16.77■□□□□ 0.28
CHD3-204ENST00000439235 REG1BP48304 166 aa16.77■□□□□ 0.28
CHD3-204ENST00000439235 Q6ZNX1 250 aa16.77■□□□□ 0.28
CHD3-204ENST00000439235 C1orf229Q6ZS94 237 aaPredicted RBP16.77■□□□□ 0.28
CHD3-204ENST00000439235 LHFPL4Q7Z7J7 247 aa16.77■□□□□ 0.28
CHD3-204ENST00000439235 LYG2Q86SG7 212 aa16.77■□□□□ 0.28
CHD3-204ENST00000439235 NANPQ8TBE9 248 aa16.77■□□□□ 0.28
CHD3-204ENST00000439235 GALNT14Q96FL9 552 aa16.77■□□□□ 0.28
CHD3-204ENST00000439235 GPHA2Q96T91 129 aa16.77■□□□□ 0.28
CHD3-204ENST00000439235 MRPL20Q9BYC9 149 aaKnown RBP16.77■□□□□ 0.28
CHD3-204ENST00000439235 CSMD1Q96PZ7 3565 aa16.77■□□□□ 0.28
CHD3-204ENST00000439235 CCDC168Q8NDH2 2452 aa16.77■□□□□ 0.27
CHD3-204ENST00000439235 IGHV3OR16-10A0A075B7F0 116 aa16.76■□□□□ 0.27
CHD3-204ENST00000439235 C9orf170A2RU37 121 aa16.76■□□□□ 0.27
CHD3-204ENST00000439235 IFNA2P01563 188 aa16.76■□□□□ 0.27
CHD3-204ENST00000439235 FOSL1P15407 271 aa16.76■□□□□ 0.27
CHD3-204ENST00000439235 KIR2DS2P43631 304 aa16.76■□□□□ 0.27
CHD3-204ENST00000439235 ARHGDIBP52566 201 aa16.76■□□□□ 0.27
CHD3-204ENST00000439235 TAGLNQ01995 201 aaKnown RBP16.76■□□□□ 0.27
CHD3-204ENST00000439235 DHRS2Q13268 280 aa16.76■□□□□ 0.27
CHD3-204ENST00000439235 KLF17Q5JT82 389 aaPredicted RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms