RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 M0R1X1 148 aa13.54□□□□□ -0.24
DHFR-201ENST00000439211 HLA-DRB5Q30154 266 aa13.54□□□□□ -0.24
DHFR-201ENST00000439211 LYSMD4Q5XG99 296 aa13.54□□□□□ -0.24
DHFR-201ENST00000439211 NAT8BQ9UHF3 227 aa13.54□□□□□ -0.24
DHFR-201ENST00000439211 EYSQ5T1H1 3165 aa13.53□□□□□ -0.24
DHFR-201ENST00000439211 DPRXA6NFQ7 191 aa13.53□□□□□ -0.24
DHFR-201ENST00000439211 VAMP5O95183 116 aa13.53□□□□□ -0.24
DHFR-201ENST00000439211 COMPP49747 757 aaPredicted RBP13.53□□□□□ -0.24
DHFR-201ENST00000439211 UBE2NP61088 152 aaKnown RBP13.53□□□□□ -0.24
DHFR-201ENST00000439211 HBG1P69891 147 aa13.53□□□□□ -0.24
DHFR-201ENST00000439211 HBG2P69892 147 aa13.53□□□□□ -0.24
DHFR-201ENST00000439211 RPL24P83731 157 aaKnown RBP13.53□□□□□ -0.24
DHFR-201ENST00000439211 Q56UQ5 140 aa13.53□□□□□ -0.24
DHFR-201ENST00000439211 C1orf174Q8IYL3 243 aa13.53□□□□□ -0.24
DHFR-201ENST00000439211 IL1F10Q8WWZ1 152 aa13.53□□□□□ -0.24
DHFR-201ENST00000439211 ZNF837Q96EG3 531 aaPredicted RBP13.53□□□□□ -0.24
DHFR-201ENST00000439211 GPR27Q9NS67 375 aa13.53□□□□□ -0.24
DHFR-201ENST00000439211 SERPINE2P07093 398 aa13.53□□□□□ -0.24
DHFR-201ENST00000439211 ZNF32P17041 273 aa13.53□□□□□ -0.24
DHFR-201ENST00000439211 OR2V1Q8NHB1 315 aa13.53□□□□□ -0.24
DHFR-201ENST00000439211 NEIL1Q96FI4 390 aaPredicted RBP13.53□□□□□ -0.24
DHFR-201ENST00000439211 GPHA2Q96T91 129 aa13.53□□□□□ -0.24
DHFR-201ENST00000439211 DUSP23Q9BVJ7 150 aa13.53□□□□□ -0.24
DHFR-201ENST00000439211 CHRNA10Q9GZZ6 450 aa13.53□□□□□ -0.24
DHFR-201ENST00000439211 A0A1B0GV72 72 aa13.53□□□□□ -0.24
DHFR-201ENST00000439211 SNURFLB1AK76 121 aa13.53□□□□□ -0.24
DHFR-201ENST00000439211 J3QW42 95 aa13.53□□□□□ -0.24
DHFR-201ENST00000439211 PAGE4O60829 102 aa13.53□□□□□ -0.24
DHFR-201ENST00000439211 ANOS1P23352 680 aa13.53□□□□□ -0.24
DHFR-201ENST00000439211 SMIM21Q3B7S5 101 aa13.53□□□□□ -0.24
DHFR-201ENST00000439211 NFAM1Q8NET5 270 aaPredicted RBP13.53□□□□□ -0.24
DHFR-201ENST00000439211 OR10G4Q8NGN3 311 aa13.53□□□□□ -0.24
DHFR-201ENST00000439211 ST6GALNAC6Q969X2 333 aa13.53□□□□□ -0.24
DHFR-201ENST00000439211 E9PLN8 166 aa13.52□□□□□ -0.24
DHFR-201ENST00000439211 CRYAAP02489 173 aa13.52□□□□□ -0.24
DHFR-201ENST00000439211 MGST1P10620 155 aaKnown RBP13.52□□□□□ -0.24
DHFR-201ENST00000439211 PRRX1P54821 245 aa13.52□□□□□ -0.24
DHFR-201ENST00000439211 SCGB2A2Q13296 93 aa13.52□□□□□ -0.24
DHFR-201ENST00000439211 SPANXN5Q5MJ07 72 aa13.52□□□□□ -0.24
DHFR-201ENST00000439211 OR4D5Q8NGN0 318 aa13.52□□□□□ -0.24
DHFR-201ENST00000439211 MRPL18Q9H0U6 180 aaKnown RBP13.52□□□□□ -0.24
DHFR-201ENST00000439211 C3orf85A0A1B0GTC6 90 aa13.52□□□□□ -0.25
DHFR-201ENST00000439211 GAGE12BA1L429 117 aa13.52□□□□□ -0.25
DHFR-201ENST00000439211 GAGE10A6NGK3 116 aa13.52□□□□□ -0.25
DHFR-201ENST00000439211 NPIPB13A6NJU9 1138 aa13.52□□□□□ -0.25
DHFR-201ENST00000439211 NPIPB4C9JG80 1138 aa13.52□□□□□ -0.25
DHFR-201ENST00000439211 SYNGR4O95473 234 aa13.52□□□□□ -0.25
DHFR-201ENST00000439211 BAXQ07812 192 aa13.52□□□□□ -0.25
DHFR-201ENST00000439211 LPAL2Q16609 132 aa13.52□□□□□ -0.25
DHFR-201ENST00000439211 OSR2Q8N2R0 312 aa13.52□□□□□ -0.25
DHFR-201ENST00000439211 A0A096LPE4 126 aa13.52□□□□□ -0.25
DHFR-201ENST00000439211 A0A1W2PPZ6 126 aa13.52□□□□□ -0.25
DHFR-201ENST00000439211 CLEC18AA5D8T8 446 aa13.52□□□□□ -0.25
DHFR-201ENST00000439211 TSPOP30536 169 aa13.52□□□□□ -0.25
DHFR-201ENST00000439211 LCN2P80188 198 aa13.52□□□□□ -0.25
DHFR-201ENST00000439211 CEACAM16Q2WEN9 425 aa13.52□□□□□ -0.25
DHFR-201ENST00000439211 KIAA1644Q3SXP7 199 aa13.52□□□□□ -0.25
DHFR-201ENST00000439211 CLEC18CQ8NCF0 446 aa13.52□□□□□ -0.25
DHFR-201ENST00000439211 UBE2L5PA0A1B0GUS4 154 aa13.51□□□□□ -0.25
DHFR-201ENST00000439211 GJE1A6NN92 205 aa13.51□□□□□ -0.25
DHFR-201ENST00000439211 SH2D1BO14796 132 aa13.51□□□□□ -0.25
DHFR-201ENST00000439211 IGLC2P0DOY2 106 aa13.51□□□□□ -0.25
DHFR-201ENST00000439211 IGLC3P0DOY3 106 aa13.51□□□□□ -0.25
DHFR-201ENST00000439211 CTSSP25774 331 aa13.51□□□□□ -0.25
DHFR-201ENST00000439211 GDF1P27539 372 aa13.51□□□□□ -0.25
DHFR-201ENST00000439211 EXT1Q16394 746 aa13.51□□□□□ -0.25
DHFR-201ENST00000439211 VWA1Q6PCB0 445 aa13.51□□□□□ -0.25
DHFR-201ENST00000439211 VSIRQ9H7M9 311 aa13.51□□□□□ -0.25
DHFR-201ENST00000439211 CD300LBA8K4G0 201 aa13.51□□□□□ -0.25
DHFR-201ENST00000439211 ICE1Q9Y2F5 2266 aa13.51□□□□□ -0.25
DHFR-201ENST00000439211 ZNF891A8MT65 544 aaPredicted RBP13.51□□□□□ -0.25
DHFR-201ENST00000439211 NUDT3O95989 172 aa13.51□□□□□ -0.25
DHFR-201ENST00000439211 THBS3P49746 956 aa13.51□□□□□ -0.25
DHFR-201ENST00000439211 HIST3H3Q16695 136 aa13.51□□□□□ -0.25
DHFR-201ENST00000439211 C17orf82Q86X59 251 aaPredicted RBP13.51□□□□□ -0.25
DHFR-201ENST00000439211 OR1F12Q8NHA8 337 aa13.51□□□□□ -0.25
DHFR-201ENST00000439211 LYZL4Q96KX0 146 aa13.51□□□□□ -0.25
DHFR-201ENST00000439211 NRN1Q9NPD7 142 aa13.51□□□□□ -0.25
DHFR-201ENST00000439211 IGHV5-10-1A0A0J9YXX1 117 aa13.5□□□□□ -0.25
DHFR-201ENST00000439211 A0A0U1RQV5 110 aa13.5□□□□□ -0.25
DHFR-201ENST00000439211 OR2Y1Q8NGV0 311 aa13.5□□□□□ -0.25
DHFR-201ENST00000439211 RHBDD1Q8TEB9 315 aa13.5□□□□□ -0.25
DHFR-201ENST00000439211 GPR179Q6PRD1 2367 aa13.5□□□□□ -0.25
DHFR-201ENST00000439211 A0A1W2PQM1 296 aa13.5□□□□□ -0.25
DHFR-201ENST00000439211 SHISA7A6NL88 538 aa13.5□□□□□ -0.25
DHFR-201ENST00000439211 CEACAM18A8MTB9 384 aa13.5□□□□□ -0.25
DHFR-201ENST00000439211 PROB1E7EW31 1015 aa13.5□□□□□ -0.25
DHFR-201ENST00000439211 HSBP1O75506 76 aa13.5□□□□□ -0.25
DHFR-201ENST00000439211 ZNF17P17021 662 aa13.5□□□□□ -0.25
DHFR-201ENST00000439211 MPLP40238 635 aa13.5□□□□□ -0.25
DHFR-201ENST00000439211 SPSB1Q96BD6 273 aa13.5□□□□□ -0.25
DHFR-201ENST00000439211 WDR61Q9GZS3 305 aaKnown RBP13.5□□□□□ -0.25
DHFR-201ENST00000439211 CLEC5AQ9NY25 188 aa13.5□□□□□ -0.25
DHFR-201ENST00000439211 REV3LO60673 3130 aa13.5□□□□□ -0.25
DHFR-201ENST00000439211 A0A0J9YW62 118 aa13.5□□□□□ -0.25
DHFR-201ENST00000439211 H0Y8G0 127 aa13.5□□□□□ -0.25
DHFR-201ENST00000439211 CCL2P13500 99 aa13.5□□□□□ -0.25
DHFR-201ENST00000439211 FOLR3P41439 243 aa13.5□□□□□ -0.25
DHFR-201ENST00000439211 MRPL21Q7Z2W9 205 aaKnown RBP13.5□□□□□ -0.25
DHFR-201ENST00000439211 NAT6Q93015 286 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms