RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 GALNSP34059 522 aa10.08□□□□□ -0.8
PTCH1-209ENST00000437951 MAFAQ8NHW3 353 aaPredicted RBP10.08□□□□□ -0.8
PTCH1-209ENST00000437951 TAF15Q92804 592 aaKnown RBP eCLIP10.08□□□□□ -0.8
PTCH1-209ENST00000437951 ZNF714Q96N38 554 aa10.08□□□□□ -0.8
PTCH1-209ENST00000437951 COL6A6A6NMZ7 2263 aa10.08□□□□□ -0.8
PTCH1-209ENST00000437951 ABCA7Q8IZY2 2146 aa10.08□□□□□ -0.8
PTCH1-209ENST00000437951 A0A1W2PQD3 144 aa10.07□□□□□ -0.8
PTCH1-209ENST00000437951 SFTPCP11686 197 aa10.07□□□□□ -0.8
PTCH1-209ENST00000437951 ZNF645Q8N7E2 425 aa10.07□□□□□ -0.8
PTCH1-209ENST00000437951 ELSPBP1Q96BH3 223 aa10.07□□□□□ -0.8
PTCH1-209ENST00000437951 LINC00470Q9BZP3 86 aa10.07□□□□□ -0.8
PTCH1-209ENST00000437951 FAM90A10PA6NDY2 464 aa10.07□□□□□ -0.8
PTCH1-209ENST00000437951 FAM90A18PA6NE21 464 aa10.07□□□□□ -0.8
PTCH1-209ENST00000437951 FAM90A16PA6NEW6 464 aa10.07□□□□□ -0.8
PTCH1-209ENST00000437951 FAM90A20PA6NIJ5 464 aa10.07□□□□□ -0.8
PTCH1-209ENST00000437951 FAM90A8PA6NJQ4 464 aa10.07□□□□□ -0.8
PTCH1-209ENST00000437951 FAM90A7PA6NKC0 464 aa10.07□□□□□ -0.8
PTCH1-209ENST00000437951 FAM90A22PA8MWA6 464 aa10.07□□□□□ -0.8
PTCH1-209ENST00000437951 FAM90A12PA8MX19 464 aa10.07□□□□□ -0.8
PTCH1-209ENST00000437951 FAM90A5PA8MXJ8 464 aa10.07□□□□□ -0.8
PTCH1-209ENST00000437951 FAM90A23PA8MXZ1 464 aa10.07□□□□□ -0.8
PTCH1-209ENST00000437951 DLL1O00548 723 aa10.07□□□□□ -0.8
PTCH1-209ENST00000437951 SOCS1O15524 211 aa10.07□□□□□ -0.8
PTCH1-209ENST00000437951 FAM90A15PP0C7V4 464 aa10.07□□□□□ -0.8
PTCH1-209ENST00000437951 FAM90A13PP0C7W8 464 aa10.07□□□□□ -0.8
PTCH1-209ENST00000437951 FAM90A14PP0C7W9 464 aa10.07□□□□□ -0.8
PTCH1-209ENST00000437951 FAM90A24PP0C7X0 464 aa10.07□□□□□ -0.8
PTCH1-209ENST00000437951 SRD5A2P31213 254 aa10.07□□□□□ -0.8
PTCH1-209ENST00000437951 GPR35Q9HC97 309 aa10.07□□□□□ -0.8
PTCH1-209ENST00000437951 TNFRSF12AQ9NP84 129 aa10.07□□□□□ -0.8
PTCH1-209ENST00000437951 CCL28Q9NRJ3 127 aa10.07□□□□□ -0.8
PTCH1-209ENST00000437951 MPZL1O95297 269 aa10.07□□□□□ -0.8
PTCH1-209ENST00000437951 ANOS1P23352 680 aa10.07□□□□□ -0.8
PTCH1-209ENST00000437951 TNFRSF9Q07011 255 aa10.07□□□□□ -0.8
PTCH1-209ENST00000437951 PRICKLE4Q2TBC4 344 aa10.07□□□□□ -0.8
PTCH1-209ENST00000437951 PPP1R3EQ9H7J1 279 aa10.07□□□□□ -0.8
PTCH1-209ENST00000437951 YAE1D1Q9NRH1 226 aa10.07□□□□□ -0.8
PTCH1-209ENST00000437951 IL36RNQ9UBH0 155 aa10.07□□□□□ -0.8
PTCH1-209ENST00000437951 WDYHV1Q96HA8 205 aa10.07□□□□□ -0.8
PTCH1-209ENST00000437951 OR8B2Q96RD0 313 aa10.07□□□□□ -0.8
PTCH1-209ENST00000437951 H7C1H1 209 aa10.07□□□□□ -0.8
PTCH1-209ENST00000437951 HOXA5P20719 270 aa10.07□□□□□ -0.8
PTCH1-209ENST00000437951 NUDT8Q8WV74 236 aa10.07□□□□□ -0.8
PTCH1-209ENST00000437951 FOCADQ5VW36 1801 aa10.07□□□□□ -0.8
PTCH1-209ENST00000437951 TMEM30BQ3MIR4 351 aa10.07□□□□□ -0.8
PTCH1-209ENST00000437951 MMD2Q8IY49 270 aa10.07□□□□□ -0.8
PTCH1-209ENST00000437951 RAB1CQ92928 201 aa10.07□□□□□ -0.8
PTCH1-209ENST00000437951 IGLV3-25P01717 112 aa10.07□□□□□ -0.8
PTCH1-209ENST00000437951 RRN3P1Q2M238 152 aa10.07□□□□□ -0.8
PTCH1-209ENST00000437951 OR4A5Q8NH83 315 aa10.07□□□□□ -0.8
PTCH1-209ENST00000437951 LAMB2P55268 1798 aa10.06□□□□□ -0.8
PTCH1-209ENST00000437951 WNT5AP41221 380 aa10.06□□□□□ -0.8
PTCH1-209ENST00000437951 DYNLRB2Q8TF09 96 aa10.06□□□□□ -0.8
PTCH1-209ENST00000437951 TBL2Q9Y4P3 447 aaKnown RBP10.06□□□□□ -0.8
PTCH1-209ENST00000437951 PGPEP1LA6NFU8 196 aa10.06□□□□□ -0.8
PTCH1-209ENST00000437951 K7ESM1 405 aa10.06□□□□□ -0.8
PTCH1-209ENST00000437951 S100A7L2Q5SY68 101 aa10.06□□□□□ -0.8
PTCH1-209ENST00000437951 DPH3Q96FX2 82 aa10.06□□□□□ -0.8
PTCH1-209ENST00000437951 TIMP4Q99727 224 aa10.06□□□□□ -0.8
PTCH1-209ENST00000437951 GPR183P32249 361 aa10.06□□□□□ -0.8
PTCH1-209ENST00000437951 GAGE2BQ13066 116 aa10.06□□□□□ -0.8
PTCH1-209ENST00000437951 KCNMB1Q16558 191 aa10.06□□□□□ -0.8
PTCH1-209ENST00000437951 GAGE2EQ4V326 116 aa10.06□□□□□ -0.8
PTCH1-209ENST00000437951 GAGE2DQ9UEU5 116 aa10.06□□□□□ -0.8
PTCH1-209ENST00000437951 MPDZO75970 2070 aa10.06□□□□□ -0.8
PTCH1-209ENST00000437951 TRGV5A0A0B4J1U4 118 aa10.06□□□□□ -0.8
PTCH1-209ENST00000437951 F2RL2O00254 374 aa10.06□□□□□ -0.8
PTCH1-209ENST00000437951 PHF7Q9BWX1 381 aaPredicted RBP10.06□□□□□ -0.8
PTCH1-209ENST00000437951 FLRT3Q9NZU0 649 aa10.06□□□□□ -0.8
PTCH1-209ENST00000437951 KLK2P20151 261 aa10.06□□□□□ -0.8
PTCH1-209ENST00000437951 SNAI3Q3KNW1 292 aa10.06□□□□□ -0.8
PTCH1-209ENST00000437951 KLK13Q9UKR3 277 aa10.06□□□□□ -0.8
PTCH1-209ENST00000437951 TSPOP30536 169 aa10.06□□□□□ -0.8
PTCH1-209ENST00000437951 MC5RP33032 325 aa10.06□□□□□ -0.8
PTCH1-209ENST00000437951 RND3P61587 244 aa10.06□□□□□ -0.8
PTCH1-209ENST00000437951 GPR82Q96P67 336 aa10.06□□□□□ -0.8
PTCH1-209ENST00000437951 DMRTA2Q96SC8 542 aa10.06□□□□□ -0.8
PTCH1-209ENST00000437951 ARRDC1-AS1Q9H2J1 176 aa10.06□□□□□ -0.8
PTCH1-209ENST00000437951 CHODLQ9H9P2 273 aa10.06□□□□□ -0.8
PTCH1-209ENST00000437951 IGHV3-64DA0A0J9YX35 117 aa10.05□□□□□ -0.8
PTCH1-209ENST00000437951 DEFB103AP81534 67 aa10.05□□□□□ -0.8
PTCH1-209ENST00000437951 SLC6A13Q9NSD5 602 aa10.05□□□□□ -0.8
PTCH1-209ENST00000437951 BEX4Q9NWD9 120 aaPredicted RBP10.05□□□□□ -0.8
PTCH1-209ENST00000437951 INSIG2Q9Y5U4 225 aa10.05□□□□□ -0.8
PTCH1-209ENST00000437951 TMEM56-RWDD3S4R434 201 aa10.05□□□□□ -0.8
PTCH1-209ENST00000437951 TSPAN2O60636 221 aa10.05□□□□□ -0.8
PTCH1-209ENST00000437951 CD8AP01732 235 aa10.05□□□□□ -0.8
PTCH1-209ENST00000437951 TMEM95Q3KNT9 176 aa10.05□□□□□ -0.8
PTCH1-209ENST00000437951 IL36BQ9NZH7 164 aa10.05□□□□□ -0.8
PTCH1-209ENST00000437951 CRYBG1Q9Y4K1 1723 aa10.05□□□□□ -0.8
PTCH1-209ENST00000437951 OR1K1Q8NGR3 316 aa10.05□□□□□ -0.8
PTCH1-209ENST00000437951 HEXA-AS1Q9H8Q6 139 aa10.05□□□□□ -0.8
PTCH1-209ENST00000437951 TNRC6CQ9HCJ0 1690 aaKnown RBP10.05□□□□□ -0.8
PTCH1-209ENST00000437951 FREM3P0C091 2139 aa10.05□□□□□ -0.8
PTCH1-209ENST00000437951 A0A0U1RQV5 110 aa10.05□□□□□ -0.8
PTCH1-209ENST00000437951 ODAMA1E959 279 aa10.05□□□□□ -0.8
PTCH1-209ENST00000437951 J3QT63 122 aa10.05□□□□□ -0.8
PTCH1-209ENST00000437951 RFESDQ8TAC1 157 aa10.05□□□□□ -0.8
PTCH1-209ENST00000437951 TMEM101Q96IK0 257 aa10.05□□□□□ -0.8
PTCH1-209ENST00000437951 KBTBD11-OT1A0A1B0GTJ5 212 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms