RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 P0C879 139 aa21.32■■□□□ 1
CPNE1-216ENST00000437340 RAB5CP51148 216 aa21.32■■□□□ 1
CPNE1-216ENST00000437340 IZUMO4Q1ZYL8 232 aa21.32■■□□□ 1
CPNE1-216ENST00000437340 MEX3AA1L020 520 aaKnown RBP21.31■■□□□ 1
CPNE1-216ENST00000437340 SIGLEC5O15389 551 aa21.31■■□□□ 1
CPNE1-216ENST00000437340 NXPH3O95157 252 aa21.31■■□□□ 1
CPNE1-216ENST00000437340 CRYZL1O95825 349 aa21.31■■□□□ 1
CPNE1-216ENST00000437340 SELLP14151 372 aa21.31■■□□□ 1
CPNE1-216ENST00000437340 CHRNB4P30926 498 aa21.31■■□□□ 1
CPNE1-216ENST00000437340 GPR12P47775 334 aa21.31■■□□□ 1
CPNE1-216ENST00000437340 TAS2R30P59541 319 aa21.31■■□□□ 1
CPNE1-216ENST00000437340 CD300LFQ8TDQ1 290 aa21.31■■□□□ 1
CPNE1-216ENST00000437340 ICE1Q9Y2F5 2266 aa21.31■■□□□ 1
CPNE1-216ENST00000437340 TRGV10A0A0A0MS01 117 aa21.31■■□□□ 1
CPNE1-216ENST00000437340 C17orf98A8MV24 154 aa21.31■■□□□ 1
CPNE1-216ENST00000437340 ATXN7O15265 892 aaPredicted RBP21.31■■□□□ 1
CPNE1-216ENST00000437340 TXNL1O43396 289 aa21.31■■□□□ 1
CPNE1-216ENST00000437340 DANCRP0C864 163 aa21.31■■□□□ 1
CPNE1-216ENST00000437340 BRWD1-AS2P59051 145 aa21.31■■□□□ 1
CPNE1-216ENST00000437340 PJVKQ0ZLH3 352 aa21.31■■□□□ 1
CPNE1-216ENST00000437340 LTC4SQ16873 150 aa21.31■■□□□ 1
CPNE1-216ENST00000437340 SWI5Q1ZZU3 235 aa21.31■■□□□ 1
CPNE1-216ENST00000437340 C17orf58Q2M2W7 97 aa21.31■■□□□ 1
CPNE1-216ENST00000437340 Q3ZCU0 254 aa21.31■■□□□ 1
CPNE1-216ENST00000437340 BTNL3Q6UXE8 466 aa21.31■■□□□ 1
CPNE1-216ENST00000437340 STX12Q86Y82 276 aa21.31■■□□□ 1
CPNE1-216ENST00000437340 DMRTC2Q8IXT2 367 aaPredicted RBP21.31■■□□□ 1
CPNE1-216ENST00000437340 C1orf87Q8N0U7 546 aa21.31■■□□□ 1
CPNE1-216ENST00000437340 DEFB108BQ8NET1 73 aa21.31■■□□□ 1
CPNE1-216ENST00000437340 OR5C1Q8NGR4 320 aa21.31■■□□□ 1
CPNE1-216ENST00000437340 NARFLQ9H6Q4 476 aa21.31■■□□□ 1
CPNE1-216ENST00000437340 SAP30LQ9HAJ7 183 aa21.31■■□□□ 1
CPNE1-216ENST00000437340 KBTBD11-OT1A0A1B0GTJ5 212 aa21.3■■□□□ 1
CPNE1-216ENST00000437340 GYPAP02724 150 aa21.3■■□□□ 1
CPNE1-216ENST00000437340 TMEM30BQ3MIR4 351 aa21.3■■□□□ 1
CPNE1-216ENST00000437340 ZNF295-AS1Q8N0V1 137 aa21.3■■□□□ 1
CPNE1-216ENST00000437340 RNASE6Q93091 150 aaKnown RBP21.3■■□□□ 1
CPNE1-216ENST00000437340 PLPPR2Q96GM1 343 aa21.3■■□□□ 1
CPNE1-216ENST00000437340 CCL13Q99616 98 aa21.3■■□□□ 1
CPNE1-216ENST00000437340 CLN8Q9UBY8 286 aa21.3■■□□□ 1
CPNE1-216ENST00000437340 GAB2Q9UQC2 676 aa21.3■■□□□ 1
CPNE1-216ENST00000437340 TRAV38-1A0A0B4J264 116 aa21.29■■□□□ 1
CPNE1-216ENST00000437340 CLDN14O95500 239 aa21.29■■□□□ 1
CPNE1-216ENST00000437340 OMGP23515 440 aa21.29■■□□□ 1
CPNE1-216ENST00000437340 SULT1A1P50225 295 aa21.29■■□□□ 1
CPNE1-216ENST00000437340 RAB7AP51149 207 aa21.29■■□□□ 1
CPNE1-216ENST00000437340 F2RL1P55085 397 aa21.29■■□□□ 1
CPNE1-216ENST00000437340 CLINT1Q14677 625 aa21.29■■□□□ 1
CPNE1-216ENST00000437340 BTNL8Q6UX41 500 aa21.29■■□□□ 1
CPNE1-216ENST00000437340 BPIFCQ8NFQ6 507 aa21.29■■□□□ 1
CPNE1-216ENST00000437340 LYPD6BQ8NI32 183 aa21.29■■□□□ 1
CPNE1-216ENST00000437340 CORO2AQ92828 525 aa21.29■■□□□ 1
CPNE1-216ENST00000437340 LINC00574Q9H8X3 128 aa21.29■■□□□ 1
CPNE1-216ENST00000437340 NDRG3Q9UGV2 375 aa21.29■■□□□ 1
CPNE1-216ENST00000437340 DSCAMO60469 2012 aa21.29■■□□□ 1
CPNE1-216ENST00000437340 NKX6-3A6NJ46 265 aa21.28■■□□□ 1
CPNE1-216ENST00000437340 LINC00473A8K010 186 aa21.28■■□□□ 1
CPNE1-216ENST00000437340 E7EQL1 145 aa21.28■■□□□ 1
CPNE1-216ENST00000437340 CST7O76096 145 aa21.28■■□□□ 1
CPNE1-216ENST00000437340 S1PR2O95136 353 aa21.28■■□□□ 1
CPNE1-216ENST00000437340 DYNLT3P51808 116 aa21.28■■□□□ 1
CPNE1-216ENST00000437340 ZNF816Q0VGE8 651 aaPredicted RBP21.28■■□□□ 1
CPNE1-216ENST00000437340 HRH4Q9H3N8 390 aa21.28■■□□□ 1
CPNE1-216ENST00000437340 GFOD1Q9NXC2 390 aa21.28■■□□□ 1
CPNE1-216ENST00000437340 RELNP78509 3460 aa21.28■■□□□ 1
CPNE1-216ENST00000437340 DYSFO75923 2080 aa21.28■■□□□ 1
CPNE1-216ENST00000437340 DUTP33316 252 aaKnown RBP21.28■■□□□ 1
CPNE1-216ENST00000437340 Q6ZRG5 221 aa21.28■■□□□ 1
CPNE1-216ENST00000437340 TGIF2LYQ8IUE0 185 aa21.28■■□□□ 1
CPNE1-216ENST00000437340 HSD17B11Q8NBQ5 300 aa21.28■■□□□ 1
CPNE1-216ENST00000437340 MS4A5Q9H3V2 200 aa21.28■■□□□ 1
CPNE1-216ENST00000437340 STRAPQ9Y3F4 350 aaKnown RBP21.28■■□□□ 1
CPNE1-216ENST00000437340 ZNF729A6NN14 1252 aaPredicted RBP21.27■■□□□ 1
CPNE1-216ENST00000437340 RAB29O14966 203 aa21.27■■□□□ 1
CPNE1-216ENST00000437340 KRASP01116 189 aa21.27■■□□□ 1
CPNE1-216ENST00000437340 CD3EP07766 207 aa21.27■■□□□ 1
CPNE1-216ENST00000437340 EFNB3Q15768 340 aa21.27■■□□□ 1
CPNE1-216ENST00000437340 OR2B11Q5JQS5 317 aa21.27■■□□□ 1
CPNE1-216ENST00000437340 DUX4L9Q6RFH8 374 aaPredicted RBP21.27■■□□□ 1
CPNE1-216ENST00000437340 FAM216BQ8N7L0 139 aa21.27■■□□□ 1
CPNE1-216ENST00000437340 DCAF16Q9NXF7 216 aa21.27■■□□□ 1
CPNE1-216ENST00000437340 COQ3Q9NZJ6 369 aa21.27■■□□□ 1
CPNE1-216ENST00000437340 HSPB7Q9UBY9 170 aa21.27■■□□□ 1
CPNE1-216ENST00000437340 DFFBO76075 338 aa21.26■□□□□ 0.99
CPNE1-216ENST00000437340 APOBEC3AP31941 199 aaPredicted RBP21.26■□□□□ 0.99
CPNE1-216ENST00000437340 G6PCP35575 357 aa21.26■□□□□ 0.99
CPNE1-216ENST00000437340 ADORA2A-AS1P86434 159 aa21.26■□□□□ 0.99
CPNE1-216ENST00000437340 MIDNQ504T8 468 aa21.26■□□□□ 0.99
CPNE1-216ENST00000437340 ATP5SQ99766 215 aa21.26■□□□□ 0.99
CPNE1-216ENST00000437340 IFI27L2Q9H2X8 130 aa21.26■□□□□ 0.99
CPNE1-216ENST00000437340 CTNNBIP1Q9NSA3 81 aaPredicted RBP21.26■□□□□ 0.99
CPNE1-216ENST00000437340 PSENENQ9NZ42 101 aa21.26■□□□□ 0.99
CPNE1-216ENST00000437340 USF3Q68DE3 2245 aa21.26■□□□□ 0.99
CPNE1-216ENST00000437340 TMEM178BH3BS89 294 aa21.25■□□□□ 0.99
CPNE1-216ENST00000437340 PROP1O75360 226 aa21.25■□□□□ 0.99
CPNE1-216ENST00000437340 M6PRP20645 277 aa21.25■□□□□ 0.99
CPNE1-216ENST00000437340 UBE2KP61086 200 aa21.25■□□□□ 0.99
CPNE1-216ENST00000437340 ZCCHC24Q8N2G6 241 aaKnown RBP21.25■□□□□ 0.99
CPNE1-216ENST00000437340 TSNAXQ99598 290 aaKnown RBP21.25■□□□□ 0.99
CPNE1-216ENST00000437340 KCNJ16Q9NPI9 418 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms