RNA–Protein interactions for RNA: ENST00000433645.1

LINC01239-201, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 3

Gene LINC01239, Length 325 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-201ENST00000433645 OR8B12Q8NGG6 310 aa0.67□□□□□ -2.3
LINC01239-201ENST00000433645 OR11H2Q8NH07 326 aa0.67□□□□□ -2.3
LINC01239-201ENST00000433645 CLDND2Q8NHS1 167 aa0.67□□□□□ -2.3
LINC01239-201ENST00000433645 TNFAIP8L1Q8WVP5 186 aa0.67□□□□□ -2.3
LINC01239-201ENST00000433645 ASB17Q8WXJ9 295 aa0.67□□□□□ -2.3
LINC01239-201ENST00000433645 FGF13Q92913 245 aa0.67□□□□□ -2.3
LINC01239-201ENST00000433645 CCDC124Q96CT7 223 aaKnown RBP0.67□□□□□ -2.3
LINC01239-201ENST00000433645 OR51B6Q9H340 312 aa0.67□□□□□ -2.3
LINC01239-201ENST00000433645 MRM2Q9UI43 246 aaKnown RBP0.67□□□□□ -2.3
LINC01239-201ENST00000433645 HHLA3Q9XRX5 114 aa0.67□□□□□ -2.3
LINC01239-201ENST00000433645 ROS1P08922 2347 aa0.67□□□□□ -2.3
LINC01239-201ENST00000433645 BRWD1Q9NSI6 2320 aa0.66□□□□□ -2.3
LINC01239-201ENST00000433645 IGHV3-64A0A075B6Q5 118 aa0.66□□□□□ -2.3
LINC01239-201ENST00000433645 IGKV3D-7A0A0C4DH55 119 aa0.66□□□□□ -2.3
LINC01239-201ENST00000433645 IGKV3OR2-268A0A0C4DH90 116 aa0.66□□□□□ -2.3
LINC01239-201ENST00000433645 CRYBB3P26998 211 aa0.66□□□□□ -2.3
LINC01239-201ENST00000433645 STC1P52823 247 aa0.66□□□□□ -2.3
LINC01239-201ENST00000433645 LINC00313P59037 77 aa0.66□□□□□ -2.3
LINC01239-201ENST00000433645 ACTBP60709 375 aa0.66□□□□□ -2.3
LINC01239-201ENST00000433645 ACTG1P63261 375 aa0.66□□□□□ -2.3
LINC01239-201ENST00000433645 ZNF791Q3KP31 576 aaPredicted RBP0.66□□□□□ -2.3
LINC01239-201ENST00000433645 FBXO48Q5FWF7 155 aa0.66□□□□□ -2.3
LINC01239-201ENST00000433645 AMTNQ6UX39 209 aa0.66□□□□□ -2.3
LINC01239-201ENST00000433645 SCGB1D4Q6XE38 83 aa0.66□□□□□ -2.3
LINC01239-201ENST00000433645 SLC35E3Q7Z769 313 aa0.66□□□□□ -2.3
LINC01239-201ENST00000433645 CCDC112Q8NEF3 446 aa0.66□□□□□ -2.3
LINC01239-201ENST00000433645 ACY3Q96HD9 319 aa0.66□□□□□ -2.3
LINC01239-201ENST00000433645 EIF5A2Q9GZV4 153 aaKnown RBP0.66□□□□□ -2.3
LINC01239-201ENST00000433645 NRBP2Q9NSY0 501 aa0.66□□□□□ -2.3
LINC01239-201ENST00000433645 PCDH15Q96QU1 1955 aa0.66□□□□□ -2.3
LINC01239-201ENST00000433645 INTS1Q8N201 2190 aaKnown RBP0.66□□□□□ -2.3
LINC01239-201ENST00000433645 NPATQ14207 1427 aa0.65□□□□□ -2.3
LINC01239-201ENST00000433645 WDR90Q96KV7 1748 aa0.65□□□□□ -2.31
LINC01239-201ENST00000433645 A0A1W2PQD3 144 aa0.65□□□□□ -2.31
LINC01239-201ENST00000433645 NPYP01303 97 aa0.65□□□□□ -2.31
LINC01239-201ENST00000433645 APOA1P02647 267 aa0.65□□□□□ -2.31
LINC01239-201ENST00000433645 OR13C7P0DN81 318 aa0.65□□□□□ -2.31
LINC01239-201ENST00000433645 AGTR1P30556 359 aa0.65□□□□□ -2.31
LINC01239-201ENST00000433645 HSPA9P38646 679 aaKnown RBP0.65□□□□□ -2.31
LINC01239-201ENST00000433645 DAD1P61803 113 aa0.65□□□□□ -2.31
LINC01239-201ENST00000433645 DYNLL1P63167 89 aaKnown RBP0.65□□□□□ -2.31
LINC01239-201ENST00000433645 SLC13A5Q86YT5 568 aaPredicted RBP0.65□□□□□ -2.31
LINC01239-201ENST00000433645 NATD1Q8N6N6 113 aa0.65□□□□□ -2.31
LINC01239-201ENST00000433645 SMCR5Q8TEV8 140 aa0.65□□□□□ -2.31
LINC01239-201ENST00000433645 CPNE2Q96FN4 548 aaPredicted RBP0.65□□□□□ -2.31
LINC01239-201ENST00000433645 SERPINB11Q96P15 392 aa0.65□□□□□ -2.31
LINC01239-201ENST00000433645 OR7D2Q96RA2 312 aa0.65□□□□□ -2.31
LINC01239-201ENST00000433645 PRRG3Q9BZD7 231 aa0.65□□□□□ -2.31
LINC01239-201ENST00000433645 MED9Q9NWA0 146 aa0.65□□□□□ -2.31
LINC01239-201ENST00000433645 MS4A12Q9NXJ0 267 aa0.65□□□□□ -2.31
LINC01239-201ENST00000433645 GLS2Q9UI32 602 aa0.65□□□□□ -2.31
LINC01239-201ENST00000433645 KLK5Q9Y337 293 aaPredicted RBP0.65□□□□□ -2.31
LINC01239-201ENST00000433645 MICAL3Q7RTP6 2002 aa0.65□□□□□ -2.31
LINC01239-201ENST00000433645 MAP3K19Q56UN5 1328 aa0.64□□□□□ -2.31
LINC01239-201ENST00000433645 CUL9Q8IWT3 2517 aa0.64□□□□□ -2.31
LINC01239-201ENST00000433645 BHLHE40O14503 412 aa0.64□□□□□ -2.31
LINC01239-201ENST00000433645 PLA2G10O15496 165 aa0.64□□□□□ -2.31
LINC01239-201ENST00000433645 MRPS14O60783 128 aaKnown RBP0.64□□□□□ -2.31
LINC01239-201ENST00000433645 CRYBA1P05813 215 aa0.64□□□□□ -2.31
LINC01239-201ENST00000433645 CRATP43155 626 aa0.64□□□□□ -2.31
LINC01239-201ENST00000433645 SERPINB10P48595 397 aa0.64□□□□□ -2.31
LINC01239-201ENST00000433645 DAPP51397 102 aa0.64□□□□□ -2.31
LINC01239-201ENST00000433645 RBM11P57052 281 aaKnown RBP0.64□□□□□ -2.31
LINC01239-201ENST00000433645 TAS2R30P59541 319 aa0.64□□□□□ -2.31
LINC01239-201ENST00000433645 SNAP25P60880 206 aa0.64□□□□□ -2.31
LINC01239-201ENST00000433645 RAB8AP61006 207 aa0.64□□□□□ -2.31
LINC01239-201ENST00000433645 BTN3A2P78410 334 aa0.64□□□□□ -2.31
LINC01239-201ENST00000433645 PRB3Q04118 309 aaPredicted RBP0.64□□□□□ -2.31
LINC01239-201ENST00000433645 C1DQ13901 141 aaKnown RBP0.64□□□□□ -2.31
LINC01239-201ENST00000433645 CLEC12BQ2HXU8 276 aa0.64□□□□□ -2.31
LINC01239-201ENST00000433645 RBM48Q5RL73 367 aaKnown RBP0.64□□□□□ -2.31
LINC01239-201ENST00000433645 CCDC12Q8WUD4 166 aaPredicted RBP0.64□□□□□ -2.31
LINC01239-201ENST00000433645 FAM210AQ96ND0 272 aa0.64□□□□□ -2.31
LINC01239-201ENST00000433645 SBDSQ9Y3A5 250 aaKnown RBP eCLIP0.64□□□□□ -2.31
LINC01239-201ENST00000433645 REREQ9P2R6 1566 aa0.64□□□□□ -2.31
LINC01239-201ENST00000433645 DIDO1Q9BTC0 2240 aaKnown RBP0.64□□□□□ -2.31
LINC01239-201ENST00000433645 CHD5Q8TDI0 1954 aa0.63□□□□□ -2.31
LINC01239-201ENST00000433645 IGKV3-7A0A075B6H7 116 aa0.63□□□□□ -2.31
LINC01239-201ENST00000433645 TRBV6-5A0A0K0K1A5 114 aa0.63□□□□□ -2.31
LINC01239-201ENST00000433645 RFPL4AA6NLU0 287 aa0.63□□□□□ -2.31
LINC01239-201ENST00000433645 RFPL4AL1F8VTS6 287 aa0.63□□□□□ -2.31
LINC01239-201ENST00000433645 COPEO14579 308 aa0.63□□□□□ -2.31
LINC01239-201ENST00000433645 SLC35E2BP0CK96 405 aa0.63□□□□□ -2.31
LINC01239-201ENST00000433645 AKR1C3P42330 323 aa0.63□□□□□ -2.31
LINC01239-201ENST00000433645 CA7P43166 264 aa0.63□□□□□ -2.31
LINC01239-201ENST00000433645 DLX6P56179 175 aa0.63□□□□□ -2.31
LINC01239-201ENST00000433645 TMEM258P61165 79 aa0.63□□□□□ -2.31
LINC01239-201ENST00000433645 SLC38A11Q08AI6 406 aa0.63□□□□□ -2.31
LINC01239-201ENST00000433645 STX3Q13277 289 aa0.63□□□□□ -2.31
LINC01239-201ENST00000433645 NNATQ16517 81 aa0.63□□□□□ -2.31
LINC01239-201ENST00000433645 LRRC28Q86X40 367 aaPredicted RBP0.63□□□□□ -2.31
LINC01239-201ENST00000433645 OR52E4Q8NGH9 312 aa0.63□□□□□ -2.31
LINC01239-201ENST00000433645 DYNC2LI1Q8TCX1 351 aa0.63□□□□□ -2.31
LINC01239-201ENST00000433645 SMIM12Q96EX1 92 aa0.63□□□□□ -2.31
LINC01239-201ENST00000433645 TMEM222Q9H0R3 208 aa0.63□□□□□ -2.31
LINC01239-201ENST00000433645 ENPP5Q9UJA9 477 aa0.63□□□□□ -2.31
LINC01239-201ENST00000433645 ANGPT4Q9Y264 503 aa0.63□□□□□ -2.31
LINC01239-201ENST00000433645 THSD7AQ9UPZ6 1657 aa0.62□□□□□ -2.31
LINC01239-201ENST00000433645 GRIN2BQ13224 1484 aa0.62□□□□□ -2.31
LINC01239-201ENST00000433645 ZNF469Q96JG9 3925 aaPredicted RBP0.62□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms