RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 MRPL18Q9H0U6 180 aaKnown RBP9.79□□□□□ -0.84
HMGCS1-202ENST00000433297 CBR3O75828 277 aa9.79□□□□□ -0.84
HMGCS1-202ENST00000433297 VENTXO95231 258 aa9.79□□□□□ -0.84
HMGCS1-202ENST00000433297 OR5G3P0C626 314 aa9.79□□□□□ -0.84
HMGCS1-202ENST00000433297 FRMD6-AS1P0C7T7 363 aa9.79□□□□□ -0.84
HMGCS1-202ENST00000433297 PMCHP20382 165 aa9.79□□□□□ -0.84
HMGCS1-202ENST00000433297 CDC34P49427 236 aaPredicted RBP9.79□□□□□ -0.84
HMGCS1-202ENST00000433297 ZNF324BQ6AW86 544 aaPredicted RBP9.79□□□□□ -0.84
HMGCS1-202ENST00000433297 SLC23A3Q6PIS1 610 aa9.79□□□□□ -0.84
HMGCS1-202ENST00000433297 TEX43Q6ZNM6 134 aa9.79□□□□□ -0.84
HMGCS1-202ENST00000433297 AAED1Q7RTV5 226 aa9.79□□□□□ -0.84
HMGCS1-202ENST00000433297 C7orf61Q8IZ16 206 aa9.79□□□□□ -0.84
HMGCS1-202ENST00000433297 ATOH7Q8N100 152 aa9.79□□□□□ -0.84
HMGCS1-202ENST00000433297 SRXN1Q9BYN0 137 aa9.79□□□□□ -0.84
HMGCS1-202ENST00000433297 TP53TG3Q9ULZ0 132 aa9.79□□□□□ -0.84
HMGCS1-202ENST00000433297 LRP4O75096 1905 aa9.78□□□□□ -0.84
HMGCS1-202ENST00000433297 A0A096LPE4 126 aa9.78□□□□□ -0.84
HMGCS1-202ENST00000433297 A0A1W2PPV4 95 aa9.78□□□□□ -0.84
HMGCS1-202ENST00000433297 A0A1W2PPZ6 126 aa9.78□□□□□ -0.84
HMGCS1-202ENST00000433297 DIRC3C9JPN6 131 aa9.78□□□□□ -0.84
HMGCS1-202ENST00000433297 SH2D1BO14796 132 aa9.78□□□□□ -0.84
HMGCS1-202ENST00000433297 VAMP5O95183 116 aa9.78□□□□□ -0.84
HMGCS1-202ENST00000433297 G6PCP35575 357 aa9.78□□□□□ -0.84
HMGCS1-202ENST00000433297 PAFAH1B2P68402 229 aa9.78□□□□□ -0.84
HMGCS1-202ENST00000433297 KIAA1644Q3SXP7 199 aa9.78□□□□□ -0.84
HMGCS1-202ENST00000433297 SPATA45Q537H7 98 aa9.78□□□□□ -0.84
HMGCS1-202ENST00000433297 ZDHHC16Q969W1 377 aa9.78□□□□□ -0.84
HMGCS1-202ENST00000433297 FOXB1Q99853 325 aa9.78□□□□□ -0.84
HMGCS1-202ENST00000433297 WNT5BQ9H1J7 359 aa9.78□□□□□ -0.84
HMGCS1-202ENST00000433297 TMEM38BQ9NVV0 291 aa9.78□□□□□ -0.84
HMGCS1-202ENST00000433297 FGF12P61328 243 aa9.78□□□□□ -0.84
HMGCS1-202ENST00000433297 ANKRD39Q53RE8 183 aa9.78□□□□□ -0.84
HMGCS1-202ENST00000433297 OR2H1Q9GZK4 316 aa9.78□□□□□ -0.84
HMGCS1-202ENST00000433297 WNT10AQ9GZT5 417 aa9.78□□□□□ -0.84
HMGCS1-202ENST00000433297 AKIRIN1Q9H9L7 192 aaPredicted RBP9.78□□□□□ -0.84
HMGCS1-202ENST00000433297 WIPI2Q9Y4P8 454 aa9.78□□□□□ -0.84
HMGCS1-202ENST00000433297 ATG2AQ2TAZ0 1938 aa9.78□□□□□ -0.84
HMGCS1-202ENST00000433297 HINT1P49773 126 aaPredicted RBP9.77□□□□□ -0.84
HMGCS1-202ENST00000433297 SLC35B1P78383 322 aa9.77□□□□□ -0.84
HMGCS1-202ENST00000433297 ZNF585BQ52M93 769 aa9.77□□□□□ -0.84
HMGCS1-202ENST00000433297 YRDCQ86U90 279 aaKnown RBP9.77□□□□□ -0.84
HMGCS1-202ENST00000433297 ZNF808Q8N4W9 903 aaPredicted RBP9.77□□□□□ -0.84
HMGCS1-202ENST00000433297 ZG16O60844 167 aa9.77□□□□□ -0.85
HMGCS1-202ENST00000433297 WNT2P09544 360 aa9.77□□□□□ -0.85
HMGCS1-202ENST00000433297 SLC25A6P12236 298 aa9.77□□□□□ -0.85
HMGCS1-202ENST00000433297 HNRNPA3P51991 378 aaKnown RBP9.77□□□□□ -0.85
HMGCS1-202ENST00000433297 UBE2NP61088 152 aaKnown RBP9.77□□□□□ -0.85
HMGCS1-202ENST00000433297 CADM4Q8NFZ8 388 aa9.77□□□□□ -0.85
HMGCS1-202ENST00000433297 OR10G8Q8NGN5 311 aa9.77□□□□□ -0.85
HMGCS1-202ENST00000433297 OR1L6Q8NGR2 347 aa9.77□□□□□ -0.85
HMGCS1-202ENST00000433297 STARD4Q96DR4 205 aa9.77□□□□□ -0.85
HMGCS1-202ENST00000433297 TECTBQ96PL2 329 aa9.77□□□□□ -0.85
HMGCS1-202ENST00000433297 TRAPPC2LQ9UL33 140 aa9.77□□□□□ -0.85
HMGCS1-202ENST00000433297 OR6C6A6NF89 314 aa9.77□□□□□ -0.85
HMGCS1-202ENST00000433297 SNURFLB1AK76 121 aa9.77□□□□□ -0.85
HMGCS1-202ENST00000433297 CCL25O15444 150 aa9.77□□□□□ -0.85
HMGCS1-202ENST00000433297 CCL3P10147 92 aa9.77□□□□□ -0.85
HMGCS1-202ENST00000433297 AMTP48728 403 aa9.77□□□□□ -0.85
HMGCS1-202ENST00000433297 ACSF3Q4G176 576 aaPredicted RBP9.77□□□□□ -0.85
HMGCS1-202ENST00000433297 ERASQ7Z444 233 aa9.77□□□□□ -0.85
HMGCS1-202ENST00000433297 LSM10Q969L4 123 aaKnown RBP9.77□□□□□ -0.85
HMGCS1-202ENST00000433297 TMEM147Q9BVK8 224 aa9.77□□□□□ -0.85
HMGCS1-202ENST00000433297 NPCDR1Q9BY65 106 aa9.77□□□□□ -0.85
HMGCS1-202ENST00000433297 FBXL7Q9UJT9 491 aa9.77□□□□□ -0.85
HMGCS1-202ENST00000433297 RNF114Q9Y508 228 aa9.77□□□□□ -0.85
HMGCS1-202ENST00000433297 EML6Q6ZMW3 1958 aa9.76□□□□□ -0.85
HMGCS1-202ENST00000433297 LMO7DNF2Z398 122 aa9.76□□□□□ -0.85
HMGCS1-202ENST00000433297 YPEL1O60688 119 aa9.76□□□□□ -0.85
HMGCS1-202ENST00000433297 SCRG1O75711 98 aa9.76□□□□□ -0.85
HMGCS1-202ENST00000433297 FBXW9Q5XUX1 488 aa9.76□□□□□ -0.85
HMGCS1-202ENST00000433297 MRPL21Q7Z2W9 205 aaKnown RBP9.76□□□□□ -0.85
HMGCS1-202ENST00000433297 TMEM144Q7Z5S9 345 aa9.76□□□□□ -0.85
HMGCS1-202ENST00000433297 OR5A2Q8NGI9 324 aa9.76□□□□□ -0.85
HMGCS1-202ENST00000433297 C22orf15Q8WYQ4 148 aa9.76□□□□□ -0.85
HMGCS1-202ENST00000433297 YPEL2Q96QA6 119 aa9.76□□□□□ -0.85
HMGCS1-202ENST00000433297 CFHR5Q9BXR6 569 aa9.76□□□□□ -0.85
HMGCS1-202ENST00000433297 CHCHD2Q9Y6H1 151 aaPredicted RBP9.76□□□□□ -0.85
HMGCS1-202ENST00000433297 CACNA1DQ01668 2161 aa9.76□□□□□ -0.85
HMGCS1-202ENST00000433297 RAMP3O60896 148 aa9.76□□□□□ -0.85
HMGCS1-202ENST00000433297 LINC00310P59036 64 aa9.76□□□□□ -0.85
HMGCS1-202ENST00000433297 FOXL1Q12952 345 aa9.76□□□□□ -0.85
HMGCS1-202ENST00000433297 RNPS1Q15287 305 aaKnown RBP9.76□□□□□ -0.85
HMGCS1-202ENST00000433297 FOXL2NBQ6ZUU3 175 aa9.76□□□□□ -0.85
HMGCS1-202ENST00000433297 CPEB3Q8NE35 698 aaKnown RBP9.76□□□□□ -0.85
HMGCS1-202ENST00000433297 FGF23Q9GZV9 251 aaPredicted RBP9.76□□□□□ -0.85
HMGCS1-202ENST00000433297 LNP1A1A4G5 178 aa9.76□□□□□ -0.85
HMGCS1-202ENST00000433297 C5orf49A4QMS7 147 aa9.76□□□□□ -0.85
HMGCS1-202ENST00000433297 MLNRO43193 412 aa9.76□□□□□ -0.85
HMGCS1-202ENST00000433297 LHX2P50458 406 aa9.76□□□□□ -0.85
HMGCS1-202ENST00000433297 LEMD1Q68G75 181 aa9.76□□□□□ -0.85
HMGCS1-202ENST00000433297 ALKBH2Q6NS38 261 aa9.76□□□□□ -0.85
HMGCS1-202ENST00000433297 KMT5CQ86Y97 462 aa9.76□□□□□ -0.85
HMGCS1-202ENST00000433297 OCC1Q8TAD7 63 aa9.76□□□□□ -0.85
HMGCS1-202ENST00000433297 CHRNA10Q9GZZ6 450 aa9.76□□□□□ -0.85
HMGCS1-202ENST00000433297 ZNF552Q9H707 407 aaPredicted RBP9.76□□□□□ -0.85
HMGCS1-202ENST00000433297 ZNF586Q9NXT0 402 aa9.76□□□□□ -0.85
HMGCS1-202ENST00000433297 URB1O60287 2271 aaKnown RBP9.75□□□□□ -0.85
HMGCS1-202ENST00000433297 IGLV3-32A0A0A0MS00 114 aa9.75□□□□□ -0.85
HMGCS1-202ENST00000433297 CXCL13O43927 109 aa9.75□□□□□ -0.85
HMGCS1-202ENST00000433297 NTF3P20783 257 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms