RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 SGPP2Q8IWX5 399 aa21.52■■□□□ 1.04
TMEM248-205ENST00000433271 LHX4Q969G2 390 aa21.52■■□□□ 1.04
TMEM248-205ENST00000433271 S1PR3Q99500 378 aa21.52■■□□□ 1.04
TMEM248-205ENST00000433271 A0A0B4J293 547 aa21.51■■□□□ 1.03
TMEM248-205ENST00000433271 TEX13DA0A0J9YY54 714 aaPredicted RBP21.51■■□□□ 1.03
TMEM248-205ENST00000433271 CRYM-AS1A6NIL9 109 aa21.51■■□□□ 1.03
TMEM248-205ENST00000433271 BUB1B-PAK6H3BSN5 160 aa21.51■■□□□ 1.03
TMEM248-205ENST00000433271 TNFSF12O43508 249 aa21.51■■□□□ 1.03
TMEM248-205ENST00000433271 ARG1P05089 322 aa21.51■■□□□ 1.03
TMEM248-205ENST00000433271 IL3RAP26951 378 aa21.51■■□□□ 1.03
TMEM248-205ENST00000433271 UBE2E1P51965 193 aa21.51■■□□□ 1.03
TMEM248-205ENST00000433271 PPP1R1AQ13522 171 aa21.51■■□□□ 1.03
TMEM248-205ENST00000433271 EIF4EBP1Q13541 118 aaPredicted RBP21.51■■□□□ 1.03
TMEM248-205ENST00000433271 C1orf229Q6ZS94 237 aaPredicted RBP21.51■■□□□ 1.03
TMEM248-205ENST00000433271 TBC1D26Q86UD7 250 aa21.51■■□□□ 1.03
TMEM248-205ENST00000433271 OR4P4Q8NGL7 312 aa21.51■■□□□ 1.03
TMEM248-205ENST00000433271 GPHA2Q96T91 129 aa21.51■■□□□ 1.03
TMEM248-205ENST00000433271 AMMECR1Q9Y4X0 333 aaPredicted RBP21.51■■□□□ 1.03
TMEM248-205ENST00000433271 ABCA1O95477 2261 aa21.51■■□□□ 1.03
TMEM248-205ENST00000433271 SUPT4H1P63272 117 aaKnown RBP21.51■■□□□ 1.03
TMEM248-205ENST00000433271 ZNF833PQ6ZTB9 187 aa21.51■■□□□ 1.03
TMEM248-205ENST00000433271 PDZD9Q8IXQ8 264 aa21.51■■□□□ 1.03
TMEM248-205ENST00000433271 ST6GALNAC6Q969X2 333 aa21.51■■□□□ 1.03
TMEM248-205ENST00000433271 DHRS2Q13268 280 aa21.5■■□□□ 1.03
TMEM248-205ENST00000433271 FAM71F2Q6NXP2 309 aa21.5■■□□□ 1.03
TMEM248-205ENST00000433271 C11orf88Q6PI97 169 aa21.5■■□□□ 1.03
TMEM248-205ENST00000433271 ZNF66Q6ZN08 573 aa21.5■■□□□ 1.03
TMEM248-205ENST00000433271 KCTD9Q7L273 389 aa21.5■■□□□ 1.03
TMEM248-205ENST00000433271 HSD17B10Q99714 261 aaKnown RBP21.5■■□□□ 1.03
TMEM248-205ENST00000433271 NAA60Q9H7X0 242 aa21.5■■□□□ 1.03
TMEM248-205ENST00000433271 GPN1Q9HCN4 374 aaPredicted RBP21.5■■□□□ 1.03
TMEM248-205ENST00000433271 KCNIP3Q9Y2W7 256 aa21.5■■□□□ 1.03
TMEM248-205ENST00000433271 AKAP9Q99996 3911 aa21.49■■□□□ 1.03
TMEM248-205ENST00000433271 M0R1X1 148 aa21.49■■□□□ 1.03
TMEM248-205ENST00000433271 HLA-AP01891 365 aaKnown RBP21.49■■□□□ 1.03
TMEM248-205ENST00000433271 VAMP1P23763 118 aa21.49■■□□□ 1.03
TMEM248-205ENST00000433271 HTR1DP28221 377 aa21.49■■□□□ 1.03
TMEM248-205ENST00000433271 LYG2Q86SG7 212 aa21.49■■□□□ 1.03
TMEM248-205ENST00000433271 SEC22CQ9BRL7 303 aa21.49■■□□□ 1.03
TMEM248-205ENST00000433271 TEX15Q9BXT5 2789 aa21.49■■□□□ 1.03
TMEM248-205ENST00000433271 A0A0A6YYJ9 748 aa21.48■■□□□ 1.03
TMEM248-205ENST00000433271 CENPVL3A0A0U1RRI6 287 aa21.48■■□□□ 1.03
TMEM248-205ENST00000433271 C9orf170A2RU37 121 aa21.48■■□□□ 1.03
TMEM248-205ENST00000433271 C7orf66A4D0T2 115 aa21.48■■□□□ 1.03
TMEM248-205ENST00000433271 RNF212BA8MTL3 300 aa21.48■■□□□ 1.03
TMEM248-205ENST00000433271 ZNF16P17020 682 aaPredicted RBP21.48■■□□□ 1.03
TMEM248-205ENST00000433271 F2RP25116 425 aa21.48■■□□□ 1.03
TMEM248-205ENST00000433271 GALNT14Q96FL9 552 aa21.48■■□□□ 1.03
TMEM248-205ENST00000433271 ALG5Q9Y673 324 aa21.48■■□□□ 1.03
TMEM248-205ENST00000433271 OTOGQ6ZRI0 2925 aa21.48■■□□□ 1.03
TMEM248-205ENST00000433271 C3orf85A0A1B0GTC6 90 aa21.47■■□□□ 1.03
TMEM248-205ENST00000433271 SNRPGP15A8MWD9 76 aa21.47■■□□□ 1.03
TMEM248-205ENST00000433271 DUTP33316 252 aaKnown RBP21.47■■□□□ 1.03
TMEM248-205ENST00000433271 DPM3Q9P2X0 92 aa21.47■■□□□ 1.03
TMEM248-205ENST00000433271 LEUTXA8MZ59 168 aa21.47■■□□□ 1.03
TMEM248-205ENST00000433271 LY6LH3BQJ8 138 aa21.47■■□□□ 1.03
TMEM248-205ENST00000433271 SFT2D2O95562 160 aa21.47■■□□□ 1.03
TMEM248-205ENST00000433271 DRAXINQ8NBI3 349 aaPredicted RBP21.47■■□□□ 1.03
TMEM248-205ENST00000433271 OR52B4Q8NGK2 314 aa21.47■■□□□ 1.03
TMEM248-205ENST00000433271 OR51H1Q8NH63 302 aa21.47■■□□□ 1.03
TMEM248-205ENST00000433271 ZNF431Q8TF32 576 aaPredicted RBP21.47■■□□□ 1.03
TMEM248-205ENST00000433271 A0A1B0GVG6 124 aa21.46■■□□□ 1.03
TMEM248-205ENST00000433271 B3GALNT1O75752 331 aa21.46■■□□□ 1.03
TMEM248-205ENST00000433271 AVPP01185 164 aa21.46■■□□□ 1.03
TMEM248-205ENST00000433271 IFNA2P01563 188 aa21.46■■□□□ 1.03
TMEM248-205ENST00000433271 LGALS4P56470 323 aa21.46■■□□□ 1.03
TMEM248-205ENST00000433271 RPL30P62888 115 aaKnown RBP21.46■■□□□ 1.03
TMEM248-205ENST00000433271 CATR1Q13166 79 aa21.46■■□□□ 1.03
TMEM248-205ENST00000433271 MINOS1Q5TGZ0 78 aa21.46■■□□□ 1.03
TMEM248-205ENST00000433271 MINOS1-NBL1R4GNA1 71 aa21.46■■□□□ 1.03
TMEM248-205ENST00000433271 A0A1W2PRD5 423 aa21.45■■□□□ 1.02
TMEM248-205ENST00000433271 A0A1W2PRF3 423 aa21.45■■□□□ 1.02
TMEM248-205ENST00000433271 A0A1W2PRM7 423 aa21.45■■□□□ 1.02
TMEM248-205ENST00000433271 LINC00473A8K010 186 aa21.45■■□□□ 1.02
TMEM248-205ENST00000433271 CREBL2O60519 120 aaPredicted RBP21.45■■□□□ 1.02
TMEM248-205ENST00000433271 DUS4LO95620 317 aaKnown RBP21.45■■□□□ 1.02
TMEM248-205ENST00000433271 OR5AC1P0C628 307 aa21.45■■□□□ 1.02
TMEM248-205ENST00000433271 ANXA3P12429 323 aa21.45■■□□□ 1.02
TMEM248-205ENST00000433271 CEACAM3P40198 252 aa21.45■■□□□ 1.02
TMEM248-205ENST00000433271 LINC00205P59089 165 aa21.45■■□□□ 1.02
TMEM248-205ENST00000433271 CBX3Q13185 183 aa21.45■■□□□ 1.02
TMEM248-205ENST00000433271 MIDNQ504T8 468 aa21.45■■□□□ 1.02
TMEM248-205ENST00000433271 LDLRAD2Q5SZI1 272 aa21.45■■□□□ 1.02
TMEM248-205ENST00000433271 ADTRPQ96IZ2 230 aa21.45■■□□□ 1.02
TMEM248-205ENST00000433271 TP53RKQ96S44 253 aa21.45■■□□□ 1.02
TMEM248-205ENST00000433271 LIN7CQ9NUP9 197 aaKnown RBP21.45■■□□□ 1.02
TMEM248-205ENST00000433271 TBL2Q9Y4P3 447 aaKnown RBP21.45■■□□□ 1.02
TMEM248-205ENST00000433271 SETXQ7Z333 2677 aaKnown RBP21.45■■□□□ 1.02
TMEM248-205ENST00000433271 CSPG4Q6UVK1 2322 aa21.44■■□□□ 1.02
TMEM248-205ENST00000433271 IGHV1-69DA0A0B4J2H0 117 aa21.44■■□□□ 1.02
TMEM248-205ENST00000433271 H0Y980 276 aa21.44■■□□□ 1.02
TMEM248-205ENST00000433271 IGHV1-69P01742 117 aa21.44■■□□□ 1.02
TMEM248-205ENST00000433271 CT45A6P0DMU7 189 aa21.44■■□□□ 1.02
TMEM248-205ENST00000433271 CT45A5P0DMU8 189 aa21.44■■□□□ 1.02
TMEM248-205ENST00000433271 CT45A7P0DMV0 189 aa21.44■■□□□ 1.02
TMEM248-205ENST00000433271 THBS3P49746 956 aa21.44■■□□□ 1.02
TMEM248-205ENST00000433271 DIAPH2-AS1Q14236 149 aa21.44■■□□□ 1.02
TMEM248-205ENST00000433271 SLC9A3R2Q15599 337 aa21.44■■□□□ 1.02
TMEM248-205ENST00000433271 SP6Q3SY56 376 aa21.44■■□□□ 1.02
TMEM248-205ENST00000433271 TGIF2LXQ8IUE1 241 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 142.2 ms