RNA–Protein interactions for RNA: ENST00000431283.1

PTPN4-204, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-204ENST00000431283 RNF170Q96K19 258 aa2.65□□□□□ -1.99
PTPN4-204ENST00000431283 GAFA1Q96PS6 74 aa2.65□□□□□ -1.99
PTPN4-204ENST00000431283 B9D2Q9BPU9 175 aa2.65□□□□□ -1.99
PTPN4-204ENST00000431283 HOPXQ9BPY8 73 aaPredicted RBP2.65□□□□□ -1.99
PTPN4-204ENST00000431283 CHID1Q9BWS9 393 aa2.65□□□□□ -1.99
PTPN4-204ENST00000431283 TLNRD1Q9H1K6 362 aa2.65□□□□□ -1.99
PTPN4-204ENST00000431283 OR52D1Q9H346 318 aa2.65□□□□□ -1.99
PTPN4-204ENST00000431283 RASL12Q9NYN1 266 aa2.65□□□□□ -1.99
PTPN4-204ENST00000431283 USE1Q9NZ43 259 aa2.65□□□□□ -1.99
PTPN4-204ENST00000431283 ADA2Q9NZK5 511 aa2.65□□□□□ -1.99
PTPN4-204ENST00000431283 DUX4Q9UBX2 424 aa2.65□□□□□ -1.99
PTPN4-204ENST00000431283 SAMD4AQ9UPU9 718 aaKnown RBP2.65□□□□□ -1.99
PTPN4-204ENST00000431283 TSSC4Q9Y5U2 329 aaPredicted RBP2.65□□□□□ -1.99
PTPN4-204ENST00000431283 ENPP4Q9Y6X5 453 aa2.65□□□□□ -1.99
PTPN4-204ENST00000431283 DNAH3Q8TD57 4116 aa2.65□□□□□ -1.99
PTPN4-204ENST00000431283 IGLV4-60A0A075B6I1 120 aa2.64□□□□□ -1.99
PTPN4-204ENST00000431283 TRBV6-6A0A0A6YYG2 114 aa2.64□□□□□ -1.99
PTPN4-204ENST00000431283 DHRS12A0PJE2 317 aa2.64□□□□□ -1.99
PTPN4-204ENST00000431283 A6NDX4 124 aa2.64□□□□□ -1.99
PTPN4-204ENST00000431283 RFPL4AA6NLU0 287 aa2.64□□□□□ -1.99
PTPN4-204ENST00000431283 ZNF850A8MQ14 1090 aa2.64□□□□□ -1.99
PTPN4-204ENST00000431283 RFPL4AL1F8VTS6 287 aa2.64□□□□□ -1.99
PTPN4-204ENST00000431283 C3orf84H3BNL1 204 aa2.64□□□□□ -1.99
PTPN4-204ENST00000431283 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.64□□□□□ -1.99
PTPN4-204ENST00000431283 K7EIL1 84 aa2.64□□□□□ -1.99
PTPN4-204ENST00000431283 SYNGR1O43759 233 aa2.64□□□□□ -1.99
PTPN4-204ENST00000431283 CHST1O43916 411 aa2.64□□□□□ -1.99
PTPN4-204ENST00000431283 EDF1O60869 148 aaKnown RBP2.64□□□□□ -1.99
PTPN4-204ENST00000431283 FCN3O75636 299 aa2.64□□□□□ -1.99
PTPN4-204ENST00000431283 GADD45GO95257 159 aa2.64□□□□□ -1.99
PTPN4-204ENST00000431283 CST4P01036 141 aa2.64□□□□□ -1.99
PTPN4-204ENST00000431283 IFNGP01579 166 aa2.64□□□□□ -1.99
PTPN4-204ENST00000431283 ARG1P05089 322 aa2.64□□□□□ -1.99
PTPN4-204ENST00000431283 H2BFMP0C1H6 154 aa2.64□□□□□ -1.99
PTPN4-204ENST00000431283 H2AFXP16104 143 aaPredicted RBP2.64□□□□□ -1.99
PTPN4-204ENST00000431283 RRM2P31350 389 aa2.64□□□□□ -1.99
PTPN4-204ENST00000431283 BRS3P32247 399 aa2.64□□□□□ -1.99
PTPN4-204ENST00000431283 PYCR1P32322 319 aa2.64□□□□□ -1.99
PTPN4-204ENST00000431283 RPS27P42677 84 aaKnown RBP2.64□□□□□ -1.99
PTPN4-204ENST00000431283 NUDT2P50583 147 aa2.64□□□□□ -1.99
PTPN4-204ENST00000431283 RAB13P51153 203 aa2.64□□□□□ -1.99
PTPN4-204ENST00000431283 GPM6AP51674 278 aa2.64□□□□□ -1.99
PTPN4-204ENST00000431283 FXYD6P3P58550 94 aa2.64□□□□□ -1.99
PTPN4-204ENST00000431283 GNG3P63215 75 aa2.64□□□□□ -1.99
PTPN4-204ENST00000431283 ELF3P78545 371 aaPredicted RBP2.64□□□□□ -1.99
PTPN4-204ENST00000431283 PRDX4Q13162 271 aa2.64□□□□□ -1.99
PTPN4-204ENST00000431283 DYNC1I2Q13409 638 aaKnown RBP2.64□□□□□ -1.99
PTPN4-204ENST00000431283 SSX2Q16385 188 aa2.64□□□□□ -1.99
PTPN4-204ENST00000431283 DGUOKQ16854 277 aa2.64□□□□□ -1.99
PTPN4-204ENST00000431283 SMIM21Q3B7S5 101 aa2.64□□□□□ -1.99
PTPN4-204ENST00000431283 TEX30Q5JUR7 227 aa2.64□□□□□ -1.99
PTPN4-204ENST00000431283 SAMD4BQ5PRF9 694 aaKnown RBP2.64□□□□□ -1.99
PTPN4-204ENST00000431283 HCP5Q6MZN7 132 aa2.64□□□□□ -1.99
PTPN4-204ENST00000431283 IL34Q6ZMJ4 242 aa2.64□□□□□ -1.99
PTPN4-204ENST00000431283 STHQ8IWL8 128 aa2.64□□□□□ -1.99
PTPN4-204ENST00000431283 LYPD1Q8N2G4 141 aa2.64□□□□□ -1.99
PTPN4-204ENST00000431283 LINC00471Q8N535 108 aa2.64□□□□□ -1.99
PTPN4-204ENST00000431283 CCDC71LQ8N9Z2 235 aa2.64□□□□□ -1.99
PTPN4-204ENST00000431283 OR51L1Q8NGJ5 315 aa2.64□□□□□ -1.99
PTPN4-204ENST00000431283 OR6K6Q8NGW6 343 aa2.64□□□□□ -1.99
PTPN4-204ENST00000431283 OR2T27Q8NH04 317 aa2.64□□□□□ -1.99
PTPN4-204ENST00000431283 NDNFQ8TB73 568 aa2.64□□□□□ -1.99
PTPN4-204ENST00000431283 PIFOQ8TCI5 191 aa2.64□□□□□ -1.99
PTPN4-204ENST00000431283 GNPDA2Q8TDQ7 276 aa2.64□□□□□ -1.99
PTPN4-204ENST00000431283 OR5P3Q8WZ94 311 aa2.64□□□□□ -1.99
PTPN4-204ENST00000431283 PIGCQ92535 297 aa2.64□□□□□ -1.99
PTPN4-204ENST00000431283 RPL3LQ92901 407 aaKnown RBP2.64□□□□□ -1.99
PTPN4-204ENST00000431283 STMN2Q93045 179 aa2.64□□□□□ -1.99
PTPN4-204ENST00000431283 ITFG2Q969R8 447 aa2.64□□□□□ -1.99
PTPN4-204ENST00000431283 SGK3Q96BR1 496 aa2.64□□□□□ -1.99
PTPN4-204ENST00000431283 FGGYQ96C11 551 aa2.64□□□□□ -1.99
PTPN4-204ENST00000431283 RCN3Q96D15 328 aa2.64□□□□□ -1.99
PTPN4-204ENST00000431283 SEH1LQ96EE3 360 aa2.64□□□□□ -1.99
PTPN4-204ENST00000431283 SDSLQ96GA7 329 aa2.64□□□□□ -1.99
PTPN4-204ENST00000431283 ATP6V1G3Q96LB4 118 aa2.64□□□□□ -1.99
PTPN4-204ENST00000431283 KCTD14Q9BQ13 255 aaPredicted RBP2.64□□□□□ -1.99
PTPN4-204ENST00000431283 YY1AP1Q9H869 796 aa2.64□□□□□ -1.99
PTPN4-204ENST00000431283 EFCAB1Q9HAE3 211 aa2.64□□□□□ -1.99
PTPN4-204ENST00000431283 C19orf12Q9NSK7 152 aa2.64□□□□□ -1.99
PTPN4-204ENST00000431283 MRPL22Q9NWU5 206 aaKnown RBP2.64□□□□□ -1.99
PTPN4-204ENST00000431283 CMTM6Q9NX76 183 aa2.64□□□□□ -1.99
PTPN4-204ENST00000431283 DNAJC27Q9NZQ0 273 aa2.64□□□□□ -1.99
PTPN4-204ENST00000431283 CD300AQ9UGN4 299 aa2.64□□□□□ -1.99
PTPN4-204ENST00000431283 RHBDD3Q9Y3P4 386 aa2.64□□□□□ -1.99
PTPN4-204ENST00000431283 TBL2Q9Y4P3 447 aaKnown RBP2.64□□□□□ -1.99
PTPN4-204ENST00000431283 COMMD3-BMI1R4GMX3 469 aa2.64□□□□□ -1.99
PTPN4-204ENST00000431283 TET2Q6N021 2002 aaPredicted RBP2.64□□□□□ -1.99
PTPN4-204ENST00000431283 TANC2Q9HCD6 1990 aa2.63□□□□□ -1.99
PTPN4-204ENST00000431283 BIRC6Q9NR09 4857 aa2.63□□□□□ -1.99
PTPN4-204ENST00000431283 IGKV1D-17A0A075B6S4 117 aa2.63□□□□□ -1.99
PTPN4-204ENST00000431283 KIR2DL5BA0A0G2JN68 375 aa2.63□□□□□ -1.99
PTPN4-204ENST00000431283 KIR2DL5BA0A0G2JPC4 375 aa2.63□□□□□ -1.99
PTPN4-204ENST00000431283 OR5B21A6NL26 309 aa2.63□□□□□ -1.99
PTPN4-204ENST00000431283 RIIAD1A6NNX1 92 aa2.63□□□□□ -1.99
PTPN4-204ENST00000431283 SERPINE3A8MV23 424 aa2.63□□□□□ -1.99
PTPN4-204ENST00000431283 HMGB1P1B2RPK0 211 aaPredicted RBP2.63□□□□□ -1.99
PTPN4-204ENST00000431283 KRTAP4-16G5E9R7 235 aaPredicted RBP2.63□□□□□ -1.99
PTPN4-204ENST00000431283 M0QZK8 103 aa2.63□□□□□ -1.99
PTPN4-204ENST00000431283 RAMP3O60896 148 aa2.63□□□□□ -1.99
PTPN4-204ENST00000431283 DIRAS1O95057 198 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms