RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 TMEM54Q969K7 222 aa4.57□□□□□ -1.68
PTPN4-203ENST00000430976 TSACCQ96A04 125 aaPredicted RBP4.57□□□□□ -1.68
PTPN4-203ENST00000430976 CXXC4Q9H2H0 198 aa4.57□□□□□ -1.68
PTPN4-203ENST00000430976 STARD5Q9NSY2 213 aa4.57□□□□□ -1.68
PTPN4-203ENST00000430976 HS3ST2Q9Y278 367 aa4.57□□□□□ -1.68
PTPN4-203ENST00000430976 PLXND1Q9Y4D7 1925 aa4.57□□□□□ -1.68
PTPN4-203ENST00000430976 EIF2AK4Q9P2K8 1649 aaKnown RBP4.56□□□□□ -1.68
PTPN4-203ENST00000430976 CACNA1CQ13936 2221 aa4.56□□□□□ -1.68
PTPN4-203ENST00000430976 LOXHD1Q8IVV2 1947 aa4.56□□□□□ -1.68
PTPN4-203ENST00000430976 ZNFX1Q9P2E3 1918 aaKnown RBP4.56□□□□□ -1.68
PTPN4-203ENST00000430976 TRAV8-1A0A0A6YYK1 113 aa4.56□□□□□ -1.68
PTPN4-203ENST00000430976 UPK1AO00322 258 aa4.56□□□□□ -1.68
PTPN4-203ENST00000430976 TAX1BP3O14907 124 aa4.56□□□□□ -1.68
PTPN4-203ENST00000430976 SPRY3O43610 288 aa4.56□□□□□ -1.68
PTPN4-203ENST00000430976 POLR2JP52435 117 aaKnown RBP4.56□□□□□ -1.68
PTPN4-203ENST00000430976 HBG2P69892 147 aa4.56□□□□□ -1.68
PTPN4-203ENST00000430976 SLC25A26Q70HW3 274 aa4.56□□□□□ -1.68
PTPN4-203ENST00000430976 LINC00596Q86U02 117 aa4.56□□□□□ -1.68
PTPN4-203ENST00000430976 SPEM1Q8N4L4 309 aa4.56□□□□□ -1.68
PTPN4-203ENST00000430976 GNPNAT1Q96EK6 184 aaPredicted RBP4.56□□□□□ -1.68
PTPN4-203ENST00000430976 TMEM59Q9BXS4 323 aa4.56□□□□□ -1.68
PTPN4-203ENST00000430976 EBPLQ9BY08 206 aa4.56□□□□□ -1.68
PTPN4-203ENST00000430976 WDR61Q9GZS3 305 aaKnown RBP4.56□□□□□ -1.68
PTPN4-203ENST00000430976 SPANXB1Q9NS25 103 aaPredicted RBP4.56□□□□□ -1.68
PTPN4-203ENST00000430976 TRAPPC1Q9Y5R8 145 aa4.56□□□□□ -1.68
PTPN4-203ENST00000430976 ATRNL1Q5VV63 1379 aa4.56□□□□□ -1.68
PTPN4-203ENST00000430976 KNL1Q8NG31 2342 aa4.56□□□□□ -1.68
PTPN4-203ENST00000430976 A0A1B0GX78 115 aa4.56□□□□□ -1.68
PTPN4-203ENST00000430976 ZC3H12DA2A288 527 aaKnown RBP4.56□□□□□ -1.68
PTPN4-203ENST00000430976 SFT2D2O95562 160 aa4.56□□□□□ -1.68
PTPN4-203ENST00000430976 PMS2P2O95744 297 aa4.56□□□□□ -1.68
PTPN4-203ENST00000430976 HLA-DOAP06340 250 aa4.56□□□□□ -1.68
PTPN4-203ENST00000430976 INAFM2P0DMQ5 153 aa4.56□□□□□ -1.68
PTPN4-203ENST00000430976 MGST1P10620 155 aaKnown RBP4.56□□□□□ -1.68
PTPN4-203ENST00000430976 EFNB2P52799 333 aa4.56□□□□□ -1.68
PTPN4-203ENST00000430976 TCP10Q12799 353 aa4.56□□□□□ -1.68
PTPN4-203ENST00000430976 ELOBQ15370 118 aa4.56□□□□□ -1.68
PTPN4-203ENST00000430976 FAM27D1Q5T7N8 215 aa4.56□□□□□ -1.68
PTPN4-203ENST00000430976 MMD2Q8IY49 270 aa4.56□□□□□ -1.68
PTPN4-203ENST00000430976 ZNF433Q8N7K0 673 aaPredicted RBP4.56□□□□□ -1.68
PTPN4-203ENST00000430976 C8orf31Q8N9H6 132 aa4.56□□□□□ -1.68
PTPN4-203ENST00000430976 THAP8Q8NA92 274 aa4.56□□□□□ -1.68
PTPN4-203ENST00000430976 VSTM2AQ8TAG5 236 aa4.56□□□□□ -1.68
PTPN4-203ENST00000430976 C11orf45Q8TAV5 145 aa4.56□□□□□ -1.68
PTPN4-203ENST00000430976 TWIST2Q8WVJ9 160 aa4.56□□□□□ -1.68
PTPN4-203ENST00000430976 RND1Q92730 232 aa4.56□□□□□ -1.68
PTPN4-203ENST00000430976 BARX1Q9HBU1 254 aaPredicted RBP4.56□□□□□ -1.68
PTPN4-203ENST00000430976 MRPS16Q9Y3D3 137 aaKnown RBP4.56□□□□□ -1.68
PTPN4-203ENST00000430976 KIF20BQ96Q89 1820 aa4.56□□□□□ -1.68
PTPN4-203ENST00000430976 MAST1Q9Y2H9 1570 aa4.56□□□□□ -1.68
PTPN4-203ENST00000430976 TCRBV5S2A0A599 114 aa4.56□□□□□ -1.68
PTPN4-203ENST00000430976 H3BVH4 76 aa4.56□□□□□ -1.68
PTPN4-203ENST00000430976 K7EP34 96 aa4.56□□□□□ -1.68
PTPN4-203ENST00000430976 RER1O15258 196 aa4.56□□□□□ -1.68
PTPN4-203ENST00000430976 CD5LO43866 347 aa4.56□□□□□ -1.68
PTPN4-203ENST00000430976 ZNF93P35789 620 aaPredicted RBP4.56□□□□□ -1.68
PTPN4-203ENST00000430976 TAS2R46P59540 309 aa4.56□□□□□ -1.68
PTPN4-203ENST00000430976 STAC2Q6ZMT1 411 aa4.56□□□□□ -1.68
PTPN4-203ENST00000430976 ANKRD33Q7Z3H0 272 aa4.56□□□□□ -1.68
PTPN4-203ENST00000430976 PGBD5Q8N414 524 aa4.56□□□□□ -1.68
PTPN4-203ENST00000430976 ISL2Q96A47 359 aa4.56□□□□□ -1.68
PTPN4-203ENST00000430976 GPR21Q99679 349 aa4.56□□□□□ -1.68
PTPN4-203ENST00000430976 SSBP3Q9BWW4 388 aaPredicted RBP4.56□□□□□ -1.68
PTPN4-203ENST00000430976 WDR13Q9H1Z4 485 aa4.56□□□□□ -1.68
PTPN4-203ENST00000430976 CRB1P82279 1406 aa4.55□□□□□ -1.68
PTPN4-203ENST00000430976 G3V3Q6 166 aa4.55□□□□□ -1.68
PTPN4-203ENST00000430976 CXCL13O43927 109 aa4.55□□□□□ -1.68
PTPN4-203ENST00000430976 DUS4LO95620 317 aaKnown RBP4.55□□□□□ -1.68
PTPN4-203ENST00000430976 HBE1P02100 147 aa4.55□□□□□ -1.68
PTPN4-203ENST00000430976 EIF4EP06730 217 aaKnown RBP4.55□□□□□ -1.68
PTPN4-203ENST00000430976 PTHLHP12272 177 aa4.55□□□□□ -1.68
PTPN4-203ENST00000430976 ERVK-16P61578 105 aa4.55□□□□□ -1.68
PTPN4-203ENST00000430976 RUNX3Q13761 415 aa4.55□□□□□ -1.68
PTPN4-203ENST00000430976 RAB6CQ53S08 254 aa4.55□□□□□ -1.68
PTPN4-203ENST00000430976 OR4C11Q6IEV9 310 aa4.55□□□□□ -1.68
PTPN4-203ENST00000430976 MRGPREQ86SM8 312 aa4.55□□□□□ -1.68
PTPN4-203ENST00000430976 ATOH8Q96SQ7 321 aa4.55□□□□□ -1.68
PTPN4-203ENST00000430976 ST20Q9HBF5 79 aa4.55□□□□□ -1.68
PTPN4-203ENST00000430976 NUP205Q92621 2012 aa4.55□□□□□ -1.68
PTPN4-203ENST00000430976 MARF1Q9Y4F3 1742 aaKnown RBP4.55□□□□□ -1.68
PTPN4-203ENST00000430976 PRR14LQ5THK1 2151 aa4.55□□□□□ -1.68
PTPN4-203ENST00000430976 TMSB15BA0A087X1C1 80 aa4.55□□□□□ -1.68
PTPN4-203ENST00000430976 TM4SF5O14894 197 aa4.55□□□□□ -1.68
PTPN4-203ENST00000430976 STK17BO94768 372 aa4.55□□□□□ -1.68
PTPN4-203ENST00000430976 APOC2P02655 101 aa4.55□□□□□ -1.68
PTPN4-203ENST00000430976 PFN1P07737 140 aaKnown RBP4.55□□□□□ -1.68
PTPN4-203ENST00000430976 IL3P08700 152 aa4.55□□□□□ -1.68
PTPN4-203ENST00000430976 PFN2P35080 140 aa4.55□□□□□ -1.68
PTPN4-203ENST00000430976 TAS2R19P59542 299 aa4.55□□□□□ -1.68
PTPN4-203ENST00000430976 C1orf61Q13536 156 aa4.55□□□□□ -1.68
PTPN4-203ENST00000430976 KLF5Q13887 457 aaPredicted RBP4.55□□□□□ -1.68
PTPN4-203ENST00000430976 ALKAL1Q6UXT8 129 aa4.55□□□□□ -1.68
PTPN4-203ENST00000430976 LINC00336Q6ZUF6 198 aa4.55□□□□□ -1.68
PTPN4-203ENST00000430976 Q6ZUT4 128 aa4.55□□□□□ -1.68
PTPN4-203ENST00000430976 BPIFA4PQ86YQ2 179 aa4.55□□□□□ -1.68
PTPN4-203ENST00000430976 OR1L3Q8NH93 324 aa4.55□□□□□ -1.68
PTPN4-203ENST00000430976 MUCL1Q96DR8 90 aa4.55□□□□□ -1.68
PTPN4-203ENST00000430976 SLC25A44Q96H78 314 aaPredicted RBP4.55□□□□□ -1.68
PTPN4-203ENST00000430976 SLC17A9Q9BYT1 436 aa4.55□□□□□ -1.68
PTPN4-203ENST00000430976 ZNF703Q9H7S9 590 aaPredicted RBP4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms