RNA–Protein interactions for RNA: ENST00000430711.5

COL28A1-202, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 5

Gene COL28A1, Length 2,323 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-202ENST00000430711 LINC00473A8K010 186 aa6.02□□□□□ -1.45
COL28A1-202ENST00000430711 PMS2P5A8MQ11 134 aa6.02□□□□□ -1.45
COL28A1-202ENST00000430711 DEGS1O15121 323 aa6.02□□□□□ -1.45
COL28A1-202ENST00000430711 MLNRO43193 412 aa6.02□□□□□ -1.45
COL28A1-202ENST00000430711 AGFG2O95081 481 aa6.02□□□□□ -1.45
COL28A1-202ENST00000430711 CRYAAP02489 173 aa6.02□□□□□ -1.45
COL28A1-202ENST00000430711 GRPP07492 148 aa6.02□□□□□ -1.45
COL28A1-202ENST00000430711 SNRPCP09234 159 aaKnown RBP6.02□□□□□ -1.45
COL28A1-202ENST00000430711 CEACAM6P40199 344 aa6.02□□□□□ -1.45
COL28A1-202ENST00000430711 SRPXP78539 464 aa6.02□□□□□ -1.45
COL28A1-202ENST00000430711 COL10A1Q03692 680 aa6.02□□□□□ -1.45
COL28A1-202ENST00000430711 BAXQ07812 192 aa6.02□□□□□ -1.45
COL28A1-202ENST00000430711 AESQ08117 197 aa6.02□□□□□ -1.45
COL28A1-202ENST00000430711 ADIRFQ15847 76 aa6.02□□□□□ -1.45
COL28A1-202ENST00000430711 LTC4SQ16873 150 aa6.02□□□□□ -1.45
COL28A1-202ENST00000430711 LRRC75BQ2VPJ9 315 aa6.02□□□□□ -1.45
COL28A1-202ENST00000430711 ASPHD1Q5U4P2 390 aa6.02□□□□□ -1.45
COL28A1-202ENST00000430711 ZNF497Q6ZNH5 498 aa6.02□□□□□ -1.45
COL28A1-202ENST00000430711 OR5T1Q8NG75 326 aa6.02□□□□□ -1.45
COL28A1-202ENST00000430711 RFESDQ8TAC1 157 aa6.02□□□□□ -1.45
COL28A1-202ENST00000430711 APH1AQ96BI3 265 aa6.02□□□□□ -1.45
COL28A1-202ENST00000430711 C14orf144Q96I85 54 aa6.02□□□□□ -1.45
COL28A1-202ENST00000430711 ABHD14BQ96IU4 210 aa6.02□□□□□ -1.45
COL28A1-202ENST00000430711 MEGF10Q96KG7 1140 aa6.02□□□□□ -1.45
COL28A1-202ENST00000430711 PFDN5Q99471 154 aa6.02□□□□□ -1.45
COL28A1-202ENST00000430711 SPIN2AQ99865 258 aa6.02□□□□□ -1.45
COL28A1-202ENST00000430711 HIST1H2BLQ99880 126 aa6.02□□□□□ -1.45
COL28A1-202ENST00000430711 SPIN2BQ9BPZ2 258 aa6.02□□□□□ -1.45
COL28A1-202ENST00000430711 SPRY4Q9C004 299 aa6.02□□□□□ -1.45
COL28A1-202ENST00000430711 MAP1LC3BQ9GZQ8 125 aa6.02□□□□□ -1.45
COL28A1-202ENST00000430711 WDR61Q9GZS3 305 aaKnown RBP6.02□□□□□ -1.45
COL28A1-202ENST00000430711 GAR1Q9NY12 217 aaKnown RBP6.02□□□□□ -1.45
COL28A1-202ENST00000430711 ZMAT5Q9UDW3 170 aaKnown RBP6.02□□□□□ -1.45
COL28A1-202ENST00000430711 LRBAP50851 2863 aa6.01□□□□□ -1.45
COL28A1-202ENST00000430711 KIR2DS1A0A191URI9 304 aa6.01□□□□□ -1.45
COL28A1-202ENST00000430711 FAM90A10PA6NDY2 464 aa6.01□□□□□ -1.45
COL28A1-202ENST00000430711 FAM90A18PA6NE21 464 aa6.01□□□□□ -1.45
COL28A1-202ENST00000430711 FAM90A16PA6NEW6 464 aa6.01□□□□□ -1.45
COL28A1-202ENST00000430711 FAM90A20PA6NIJ5 464 aa6.01□□□□□ -1.45
COL28A1-202ENST00000430711 FAM90A8PA6NJQ4 464 aa6.01□□□□□ -1.45
COL28A1-202ENST00000430711 FAM90A7PA6NKC0 464 aa6.01□□□□□ -1.45
COL28A1-202ENST00000430711 FAM90A22PA8MWA6 464 aa6.01□□□□□ -1.45
COL28A1-202ENST00000430711 FAM90A12PA8MX19 464 aa6.01□□□□□ -1.45
COL28A1-202ENST00000430711 FAM90A5PA8MXJ8 464 aa6.01□□□□□ -1.45
COL28A1-202ENST00000430711 FAM90A23PA8MXZ1 464 aa6.01□□□□□ -1.45
COL28A1-202ENST00000430711 SEC14L6B5MCN3 397 aa6.01□□□□□ -1.45
COL28A1-202ENST00000430711 C12orf77C9JDV5 145 aa6.01□□□□□ -1.45
COL28A1-202ENST00000430711 HSPA12AO43301 675 aa6.01□□□□□ -1.45
COL28A1-202ENST00000430711 PROP1O75360 226 aa6.01□□□□□ -1.45
COL28A1-202ENST00000430711 LYZL6O75951 148 aa6.01□□□□□ -1.45
COL28A1-202ENST00000430711 FAM90A15PP0C7V4 464 aa6.01□□□□□ -1.45
COL28A1-202ENST00000430711 FAM90A13PP0C7W8 464 aa6.01□□□□□ -1.45
COL28A1-202ENST00000430711 FAM90A14PP0C7W9 464 aa6.01□□□□□ -1.45
COL28A1-202ENST00000430711 FAM90A24PP0C7X0 464 aa6.01□□□□□ -1.45
COL28A1-202ENST00000430711 C1QTNF9P0C862 333 aa6.01□□□□□ -1.45
COL28A1-202ENST00000430711 TUBG1P23258 451 aa6.01□□□□□ -1.45
COL28A1-202ENST00000430711 S100PP25815 95 aa6.01□□□□□ -1.45
COL28A1-202ENST00000430711 KIR2DS4P43632 304 aa6.01□□□□□ -1.45
COL28A1-202ENST00000430711 OR3A1P47881 315 aa6.01□□□□□ -1.45
COL28A1-202ENST00000430711 IDH3GP51553 393 aaPredicted RBP6.01□□□□□ -1.45
COL28A1-202ENST00000430711 GNB2P62879 340 aa6.01□□□□□ -1.45
COL28A1-202ENST00000430711 KIR2DS1Q14954 304 aa6.01□□□□□ -1.45
COL28A1-202ENST00000430711 PRAMEF6Q5VXH4 476 aa6.01□□□□□ -1.45
COL28A1-202ENST00000430711 C6orf15Q6UXA7 325 aaPredicted RBP6.01□□□□□ -1.45
COL28A1-202ENST00000430711 C1orf229Q6ZS94 237 aaPredicted RBP6.01□□□□□ -1.45
COL28A1-202ENST00000430711 STX12Q86Y82 276 aa6.01□□□□□ -1.45
COL28A1-202ENST00000430711 VKORC1L1Q8N0U8 176 aa6.01□□□□□ -1.45
COL28A1-202ENST00000430711 FGFRL1Q8N441 504 aa6.01□□□□□ -1.45
COL28A1-202ENST00000430711 OR5A2Q8NGI9 324 aa6.01□□□□□ -1.45
COL28A1-202ENST00000430711 Q8TCH9 128 aa6.01□□□□□ -1.45
COL28A1-202ENST00000430711 GNPNAT1Q96EK6 184 aaPredicted RBP6.01□□□□□ -1.45
COL28A1-202ENST00000430711 COQ2Q96H96 371 aa6.01□□□□□ -1.45
COL28A1-202ENST00000430711 OR2D2Q9H210 308 aa6.01□□□□□ -1.45
COL28A1-202ENST00000430711 CISD1Q9NZ45 108 aaKnown RBP6.01□□□□□ -1.45
COL28A1-202ENST00000430711 ZNF391Q9UJN7 358 aa6.01□□□□□ -1.45
COL28A1-202ENST00000430711 GAB2Q9UQC2 676 aa6.01□□□□□ -1.45
COL28A1-202ENST00000430711 ODAMA1E959 279 aa6□□□□□ -1.45
COL28A1-202ENST00000430711 NUPR1O60356 82 aa6□□□□□ -1.45
COL28A1-202ENST00000430711 FRMD6-AS1P0C7T7 363 aa6□□□□□ -1.45
COL28A1-202ENST00000430711 CD33P20138 364 aa6□□□□□ -1.45
COL28A1-202ENST00000430711 ERVK11-1P61568 191 aa6□□□□□ -1.45
COL28A1-202ENST00000430711 SLC38A11Q08AI6 406 aa6□□□□□ -1.45
COL28A1-202ENST00000430711 DCAF12Q5T6F0 453 aa6□□□□□ -1.45
COL28A1-202ENST00000430711 TREML4Q6UXN2 200 aa6□□□□□ -1.45
COL28A1-202ENST00000430711 SLC35E3Q7Z769 313 aa6□□□□□ -1.45
COL28A1-202ENST00000430711 C11orf53Q8IXP5 236 aa6□□□□□ -1.45
COL28A1-202ENST00000430711 SAXO1Q8IYX7 474 aa6□□□□□ -1.45
COL28A1-202ENST00000430711 LILRB2Q8N423 598 aa6□□□□□ -1.45
COL28A1-202ENST00000430711 OR8G5Q8NG78 346 aa6□□□□□ -1.45
COL28A1-202ENST00000430711 TAF15Q92804 592 aaKnown RBP eCLIP6□□□□□ -1.45
COL28A1-202ENST00000430711 LINC00470Q9BZP3 86 aa6□□□□□ -1.45
COL28A1-202ENST00000430711 TRAPPC2LQ9UL33 140 aa6□□□□□ -1.45
COL28A1-202ENST00000430711 RBM7Q9Y580 266 aaKnown RBP6□□□□□ -1.45
COL28A1-202ENST00000430711 DMRT1Q9Y5R6 373 aa6□□□□□ -1.45
COL28A1-202ENST00000430711 SMPD2O60906 423 aa6□□□□□ -1.45
COL28A1-202ENST00000430711 PTBP3O95758 552 aaKnown RBP6□□□□□ -1.45
COL28A1-202ENST00000430711 CLDN1O95832 211 aa6□□□□□ -1.45
COL28A1-202ENST00000430711 CYC1P08574 325 aa6□□□□□ -1.45
COL28A1-202ENST00000430711 P0C879 139 aa6□□□□□ -1.45
COL28A1-202ENST00000430711 MYOD1P15172 320 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms