RNA–Protein interactions for RNA: ENST00000430705.5

PTPRA-206, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 733 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-206ENST00000430705 CPEP16870 476 aa12.58□□□□□ -0.4
PTPRA-206ENST00000430705 CHRNA7P36544 502 aa12.58□□□□□ -0.4
PTPRA-206ENST00000430705 MAP2K4P45985 399 aa12.58□□□□□ -0.4
PTPRA-206ENST00000430705 VEGFCP49767 419 aa12.58□□□□□ -0.4
PTPRA-206ENST00000430705 SLURP1P55000 103 aa12.58□□□□□ -0.4
PTPRA-206ENST00000430705 SSBP2P81877 361 aaPredicted RBP12.58□□□□□ -0.4
PTPRA-206ENST00000430705 MLLT11Q13015 90 aaPredicted RBP12.58□□□□□ -0.4
PTPRA-206ENST00000430705 DCTN2Q13561 401 aaKnown RBP12.58□□□□□ -0.4
PTPRA-206ENST00000430705 TMEM65Q6PI78 240 aa12.58□□□□□ -0.4
PTPRA-206ENST00000430705 ZNF383Q8NA42 475 aa12.58□□□□□ -0.4
PTPRA-206ENST00000430705 DRAXINQ8NBI3 349 aaPredicted RBP12.58□□□□□ -0.4
PTPRA-206ENST00000430705 DCUN1D4Q92564 292 aa12.58□□□□□ -0.4
PTPRA-206ENST00000430705 PTX4Q96A99 478 aa12.58□□□□□ -0.4
PTPRA-206ENST00000430705 C5orf30Q96GV9 206 aa12.58□□□□□ -0.4
PTPRA-206ENST00000430705 FAM103A1Q9BTL3 118 aaKnown RBP12.58□□□□□ -0.4
PTPRA-206ENST00000430705 PLGRKTQ9HBL7 147 aa12.58□□□□□ -0.4
PTPRA-206ENST00000430705 ISYNA1Q9NPH2 558 aa12.58□□□□□ -0.4
PTPRA-206ENST00000430705 C12orf4Q9NQ89 552 aa12.58□□□□□ -0.4
PTPRA-206ENST00000430705 KIAA1456Q9P272 454 aa12.58□□□□□ -0.4
PTPRA-206ENST00000430705 ZMAT5Q9UDW3 170 aaKnown RBP12.58□□□□□ -0.4
PTPRA-206ENST00000430705 ZNF256Q9Y2P7 627 aaPredicted RBP12.58□□□□□ -0.4
PTPRA-206ENST00000430705 KCNK7Q9Y2U2 307 aa12.58□□□□□ -0.4
PTPRA-206ENST00000430705 WASHC3Q9Y3C0 194 aa12.58□□□□□ -0.4
PTPRA-206ENST00000430705 NUBP2Q9Y5Y2 271 aa12.58□□□□□ -0.4
PTPRA-206ENST00000430705 A3GALT2U3KPV4 340 aa12.58□□□□□ -0.4
PTPRA-206ENST00000430705 RYR2Q92736 4967 aa12.57□□□□□ -0.4
PTPRA-206ENST00000430705 IGHV4OR15-8A0A075B7B6 117 aa12.57□□□□□ -0.4
PTPRA-206ENST00000430705 A0A087WW49 117 aa12.57□□□□□ -0.4
PTPRA-206ENST00000430705 RGS10O43665 173 aa12.57□□□□□ -0.4
PTPRA-206ENST00000430705 CRHBPP24387 322 aa12.57□□□□□ -0.4
PTPRA-206ENST00000430705 CEACAM6P40199 344 aa12.57□□□□□ -0.4
PTPRA-206ENST00000430705 RAB11BQ15907 218 aa12.57□□□□□ -0.4
PTPRA-206ENST00000430705 ZNF660Q6AZW8 331 aaPredicted RBP12.57□□□□□ -0.4
PTPRA-206ENST00000430705 DLX4Q92988 240 aaPredicted RBP12.57□□□□□ -0.4
PTPRA-206ENST00000430705 URM1Q9BTM9 101 aaKnown RBP12.57□□□□□ -0.4
PTPRA-206ENST00000430705 TOLLIPQ9H0E2 274 aa12.57□□□□□ -0.4
PTPRA-206ENST00000430705 RIMS4Q9H426 269 aaPredicted RBP12.57□□□□□ -0.4
PTPRA-206ENST00000430705 RNF150Q9ULK6 438 aa12.57□□□□□ -0.4
PTPRA-206ENST00000430705 FOXA2Q9Y261 457 aaPredicted RBP12.57□□□□□ -0.4
PTPRA-206ENST00000430705 TMEM272A0A1B0GTI8 110 aa12.56□□□□□ -0.4
PTPRA-206ENST00000430705 LGALS1P09382 135 aaKnown RBP12.56□□□□□ -0.4
PTPRA-206ENST00000430705 ZBTB25P24278 435 aa12.56□□□□□ -0.4
PTPRA-206ENST00000430705 CALRP27797 417 aaKnown RBP12.56□□□□□ -0.4
PTPRA-206ENST00000430705 PSG5Q15238 335 aa12.56□□□□□ -0.4
PTPRA-206ENST00000430705 SSX1Q16384 188 aa12.56□□□□□ -0.4
PTPRA-206ENST00000430705 MOGAT2Q3SYC2 334 aa12.56□□□□□ -0.4
PTPRA-206ENST00000430705 CD200R1LQ6Q8B3 271 aa12.56□□□□□ -0.4
PTPRA-206ENST00000430705 FAM3DQ96BQ1 224 aa12.56□□□□□ -0.4
PTPRA-206ENST00000430705 LYSTQ99698 3801 aa12.56□□□□□ -0.4
PTPRA-206ENST00000430705 ASCL2Q99929 193 aa12.56□□□□□ -0.4
PTPRA-206ENST00000430705 TPRKBQ9Y3C4 175 aa12.56□□□□□ -0.4
PTPRA-206ENST00000430705 CSMD3Q7Z407 3707 aa12.55□□□□□ -0.4
PTPRA-206ENST00000430705 STARD9Q9P2P6 4700 aa12.55□□□□□ -0.4
PTPRA-206ENST00000430705 H7C2Y5 167 aa12.55□□□□□ -0.4
PTPRA-206ENST00000430705 ARPC1BO15143 372 aaKnown RBP12.55□□□□□ -0.4
PTPRA-206ENST00000430705 RBBP9O75884 186 aa12.55□□□□□ -0.4
PTPRA-206ENST00000430705 CA2P00918 260 aa12.55□□□□□ -0.4
PTPRA-206ENST00000430705 CD3GP09693 182 aa12.55□□□□□ -0.4
PTPRA-206ENST00000430705 MC5RP33032 325 aa12.55□□□□□ -0.4
PTPRA-206ENST00000430705 OR10A3P58181 314 aa12.55□□□□□ -0.4
PTPRA-206ENST00000430705 TRAM1Q15629 374 aa12.55□□□□□ -0.4
PTPRA-206ENST00000430705 C2orf76Q3KRA6 126 aa12.55□□□□□ -0.4
PTPRA-206ENST00000430705 PRSS48Q7RTY5 328 aa12.55□□□□□ -0.4
PTPRA-206ENST00000430705 EDARADDQ8WWZ3 215 aa12.55□□□□□ -0.4
PTPRA-206ENST00000430705 CLCC1Q96S66 551 aa12.55□□□□□ -0.4
PTPRA-206ENST00000430705 MGLLQ99685 303 aa12.55□□□□□ -0.4
PTPRA-206ENST00000430705 CMSS1Q9BQ75 279 aaKnown RBP12.55□□□□□ -0.4
PTPRA-206ENST00000430705 RDH8Q9NYR8 311 aa12.55□□□□□ -0.4
PTPRA-206ENST00000430705 METTL1Q9UBP6 276 aaKnown RBP12.55□□□□□ -0.4
PTPRA-206ENST00000430705 U3KQK5 164 aa12.55□□□□□ -0.4
PTPRA-206ENST00000430705 OVOL1O14753 267 aa12.54□□□□□ -0.4
PTPRA-206ENST00000430705 ARL6IP5O75915 188 aa12.54□□□□□ -0.4
PTPRA-206ENST00000430705 IGLV2-23P01705 113 aa12.54□□□□□ -0.4
PTPRA-206ENST00000430705 IGHV3-11P01762 117 aa12.54□□□□□ -0.4
PTPRA-206ENST00000430705 NHLRC4P0CG21 123 aaPredicted RBP12.54□□□□□ -0.4
PTPRA-206ENST00000430705 PSMA1P25786 263 aaKnown RBP12.54□□□□□ -0.4
PTPRA-206ENST00000430705 PLGLAQ15195 96 aa12.54□□□□□ -0.4
PTPRA-206ENST00000430705 HES5Q5TA89 166 aa12.54□□□□□ -0.4
PTPRA-206ENST00000430705 PPP1R27Q86WC6 154 aa12.54□□□□□ -0.4
PTPRA-206ENST00000430705 TCTEX1D1Q8N7M0 179 aa12.54□□□□□ -0.4
PTPRA-206ENST00000430705 LFNGQ8NES3 379 aa12.54□□□□□ -0.4
PTPRA-206ENST00000430705 MGAT4AQ9UM21 535 aa12.54□□□□□ -0.4
PTPRA-206ENST00000430705 TRDCB7Z8K6 153 aa12.53□□□□□ -0.4
PTPRA-206ENST00000430705 LINC01619G3V211 115 aa12.53□□□□□ -0.4
PTPRA-206ENST00000430705 HSPA12AO43301 675 aa12.53□□□□□ -0.4
PTPRA-206ENST00000430705 GSTP1P09211 210 aaKnown RBP12.53□□□□□ -0.4
PTPRA-206ENST00000430705 INSL3P51460 131 aa12.53□□□□□ -0.4
PTPRA-206ENST00000430705 TBCEQ15813 527 aaPredicted RBP12.53□□□□□ -0.4
PTPRA-206ENST00000430705 UNQ5815/PRO19632Q6UWF5 114 aa12.53□□□□□ -0.4
PTPRA-206ENST00000430705 OR56B1Q8NGI3 324 aa12.53□□□□□ -0.4
PTPRA-206ENST00000430705 ABHD5Q8WTS1 349 aa12.53□□□□□ -0.4
PTPRA-206ENST00000430705 ARPC1AQ92747 370 aa12.53□□□□□ -0.4
PTPRA-206ENST00000430705 RNF5Q99942 180 aa12.53□□□□□ -0.4
PTPRA-206ENST00000430705 CABLES2Q9BTV7 478 aa12.53□□□□□ -0.4
PTPRA-206ENST00000430705 CCDC90BQ9GZT6 254 aa12.53□□□□□ -0.4
PTPRA-206ENST00000430705 GHITMQ9H3K2 345 aa12.53□□□□□ -0.4
PTPRA-206ENST00000430705 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.53□□□□□ -0.4
PTPRA-206ENST00000430705 V9GY05 133 aa12.53□□□□□ -0.4
PTPRA-206ENST00000430705 A0A0B4J203 849 aa12.52□□□□□ -0.41
PTPRA-206ENST00000430705 MFNGO00587 321 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms