RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 A0A087WW49 117 aa11.49□□□□□ -0.57
MSH5-208ENST00000429846 HSPA12AO43301 675 aa11.49□□□□□ -0.57
MSH5-208ENST00000429846 CDK1P06493 297 aa11.49□□□□□ -0.57
MSH5-208ENST00000429846 UCHL1P09936 223 aa11.49□□□□□ -0.57
MSH5-208ENST00000429846 EGR2P11161 476 aaPredicted RBP11.49□□□□□ -0.57
MSH5-208ENST00000429846 PITPNAQ00169 270 aa11.49□□□□□ -0.57
MSH5-208ENST00000429846 SPHARQ15513 63 aa11.49□□□□□ -0.57
MSH5-208ENST00000429846 OGFRL1Q5TC84 451 aaPredicted RBP11.49□□□□□ -0.57
MSH5-208ENST00000429846 UNQ5815/PRO19632Q6UWF5 114 aa11.49□□□□□ -0.57
MSH5-208ENST00000429846 PPP1R27Q86WC6 154 aa11.49□□□□□ -0.57
MSH5-208ENST00000429846 SBSPONQ8IVN8 264 aa11.49□□□□□ -0.57
MSH5-208ENST00000429846 ARPC1AQ92747 370 aa11.49□□□□□ -0.57
MSH5-208ENST00000429846 ABHD14BQ96IU4 210 aa11.49□□□□□ -0.57
MSH5-208ENST00000429846 TSNAXQ99598 290 aaKnown RBP11.49□□□□□ -0.57
MSH5-208ENST00000429846 C12orf4Q9NQ89 552 aa11.49□□□□□ -0.57
MSH5-208ENST00000429846 METTL1Q9UBP6 276 aaKnown RBP11.49□□□□□ -0.57
MSH5-208ENST00000429846 HSF4Q9ULV5 492 aa11.49□□□□□ -0.57
MSH5-208ENST00000429846 FCN1O00602 326 aa11.48□□□□□ -0.57
MSH5-208ENST00000429846 CASQ2O14958 399 aaPredicted RBP11.48□□□□□ -0.57
MSH5-208ENST00000429846 HSPB1P04792 205 aaKnown RBP11.48□□□□□ -0.57
MSH5-208ENST00000429846 FRMD6-AS1P0C7T7 363 aa11.48□□□□□ -0.57
MSH5-208ENST00000429846 ARSBP15848 533 aa11.48□□□□□ -0.57
MSH5-208ENST00000429846 CPEP16870 476 aa11.48□□□□□ -0.57
MSH5-208ENST00000429846 RANBP1P43487 201 aa11.48□□□□□ -0.57
MSH5-208ENST00000429846 TPPP2P59282 170 aa11.48□□□□□ -0.57
MSH5-208ENST00000429846 CEACAM19Q7Z692 300 aa11.48□□□□□ -0.57
MSH5-208ENST00000429846 PDPNQ86YL7 162 aa11.48□□□□□ -0.57
MSH5-208ENST00000429846 PTX4Q96A99 478 aa11.48□□□□□ -0.57
MSH5-208ENST00000429846 OR4C12Q96R67 309 aa11.48□□□□□ -0.57
MSH5-208ENST00000429846 PARP12Q9H0J9 701 aaKnown RBP11.48□□□□□ -0.57
MSH5-208ENST00000429846 LPAR5Q9H1C0 372 aa11.48□□□□□ -0.57
MSH5-208ENST00000429846 KCNK15Q9H427 330 aa11.48□□□□□ -0.57
MSH5-208ENST00000429846 ZMAT4Q9H898 229 aa11.48□□□□□ -0.57
MSH5-208ENST00000429846 OR1A1Q9P1Q5 309 aa11.48□□□□□ -0.57
MSH5-208ENST00000429846 AK3Q9UIJ7 227 aa11.48□□□□□ -0.57
MSH5-208ENST00000429846 LSM2Q9Y333 95 aaKnown RBP11.48□□□□□ -0.57
MSH5-208ENST00000429846 A0A0A6YYD4 124 aa11.47□□□□□ -0.57
MSH5-208ENST00000429846 H3BUA1 57 aa11.47□□□□□ -0.57
MSH5-208ENST00000429846 SLC17A2O00624 439 aa11.47□□□□□ -0.57
MSH5-208ENST00000429846 CA2P00918 260 aa11.47□□□□□ -0.57
MSH5-208ENST00000429846 APOA2P02652 100 aa11.47□□□□□ -0.57
MSH5-208ENST00000429846 CEACAM6P40199 344 aa11.47□□□□□ -0.57
MSH5-208ENST00000429846 PSG5Q15238 335 aa11.47□□□□□ -0.57
MSH5-208ENST00000429846 CASC10Q5T4H9 136 aa11.47□□□□□ -0.57
MSH5-208ENST00000429846 FAM89BQ8N5H3 189 aa11.47□□□□□ -0.57
MSH5-208ENST00000429846 LFNGQ8NES3 379 aa11.47□□□□□ -0.57
MSH5-208ENST00000429846 CASTOR1Q8WTX7 329 aa11.47□□□□□ -0.57
MSH5-208ENST00000429846 UFD1Q92890 307 aa11.47□□□□□ -0.57
MSH5-208ENST00000429846 RHOVQ96L33 236 aa11.47□□□□□ -0.57
MSH5-208ENST00000429846 FAM103A1Q9BTL3 118 aaKnown RBP11.47□□□□□ -0.57
MSH5-208ENST00000429846 ELOVL1Q9BW60 279 aa11.47□□□□□ -0.57
MSH5-208ENST00000429846 C11orf54Q9H0W9 315 aaPredicted RBP11.47□□□□□ -0.57
MSH5-208ENST00000429846 PLGRKTQ9HBL7 147 aa11.47□□□□□ -0.57
MSH5-208ENST00000429846 ZNF221Q9UK13 617 aa11.47□□□□□ -0.57
MSH5-208ENST00000429846 STUB1Q9UNE7 303 aa11.47□□□□□ -0.57
MSH5-208ENST00000429846 GAB2Q9UQC2 676 aa11.47□□□□□ -0.57
MSH5-208ENST00000429846 SOCS1O15524 211 aa11.46□□□□□ -0.57
MSH5-208ENST00000429846 IGHV3-11P01762 117 aa11.46□□□□□ -0.57
MSH5-208ENST00000429846 IGKV1-16P04430 117 aa11.46□□□□□ -0.57
MSH5-208ENST00000429846 ZP3P21754 424 aa11.46□□□□□ -0.57
MSH5-208ENST00000429846 MED22Q15528 200 aa11.46□□□□□ -0.57
MSH5-208ENST00000429846 TRAM1Q15629 374 aa11.46□□□□□ -0.57
MSH5-208ENST00000429846 MOGAT2Q3SYC2 334 aa11.46□□□□□ -0.57
MSH5-208ENST00000429846 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.46□□□□□ -0.57
MSH5-208ENST00000429846 CLCC1Q96S66 551 aa11.46□□□□□ -0.57
MSH5-208ENST00000429846 HDHD3Q9BSH5 251 aaPredicted RBP11.46□□□□□ -0.57
MSH5-208ENST00000429846 Q9N2K0 584 aa11.46□□□□□ -0.57
MSH5-208ENST00000429846 SCN3BQ9NY72 215 aa11.46□□□□□ -0.57
MSH5-208ENST00000429846 A0A0G2JLM5 398 aa11.45□□□□□ -0.58
MSH5-208ENST00000429846 FOXI3A8MTJ6 420 aaPredicted RBP11.45□□□□□ -0.58
MSH5-208ENST00000429846 PTGES3LE9PB15 166 aa11.45□□□□□ -0.58
MSH5-208ENST00000429846 PROP1O75360 226 aa11.45□□□□□ -0.58
MSH5-208ENST00000429846 ARL6IP5O75915 188 aa11.45□□□□□ -0.58
MSH5-208ENST00000429846 TRGV3P03979 118 aa11.45□□□□□ -0.58
MSH5-208ENST00000429846 SCTP09683 121 aa11.45□□□□□ -0.58
MSH5-208ENST00000429846 PSMA1P25786 263 aaKnown RBP11.45□□□□□ -0.58
MSH5-208ENST00000429846 SERPINB10P48595 397 aa11.45□□□□□ -0.58
MSH5-208ENST00000429846 RPS16P62249 146 aaKnown RBP11.45□□□□□ -0.58
MSH5-208ENST00000429846 OVCH2Q7RTZ1 564 aa11.45□□□□□ -0.58
MSH5-208ENST00000429846 ZNF383Q8NA42 475 aa11.45□□□□□ -0.58
MSH5-208ENST00000429846 POC5Q8NA72 575 aa11.45□□□□□ -0.58
MSH5-208ENST00000429846 DRAXINQ8NBI3 349 aaPredicted RBP11.45□□□□□ -0.58
MSH5-208ENST00000429846 OR56B1Q8NGI3 324 aa11.45□□□□□ -0.58
MSH5-208ENST00000429846 TMEM68Q96MH6 324 aa11.45□□□□□ -0.58
MSH5-208ENST00000429846 MS4A10Q96PG2 267 aa11.45□□□□□ -0.58
MSH5-208ENST00000429846 CMSS1Q9BQ75 279 aaKnown RBP11.45□□□□□ -0.58
MSH5-208ENST00000429846 RANGRFQ9HD47 186 aaPredicted RBP11.45□□□□□ -0.58
MSH5-208ENST00000429846 ERICH4A6NGS2 130 aa11.44□□□□□ -0.58
MSH5-208ENST00000429846 TRIM64CA6NLI5 447 aa11.44□□□□□ -0.58
MSH5-208ENST00000429846 A8MZ25 164 aa11.44□□□□□ -0.58
MSH5-208ENST00000429846 DIRAS3O95661 229 aa11.44□□□□□ -0.58
MSH5-208ENST00000429846 IGLV1-51P01701 117 aa11.44□□□□□ -0.58
MSH5-208ENST00000429846 FXYD3Q14802 87 aa11.44□□□□□ -0.58
MSH5-208ENST00000429846 RAB11BQ15907 218 aa11.44□□□□□ -0.58
MSH5-208ENST00000429846 LIPKQ5VXJ0 399 aa11.44□□□□□ -0.58
MSH5-208ENST00000429846 GRPEL2Q8TAA5 225 aa11.44□□□□□ -0.58
MSH5-208ENST00000429846 PECRQ9BY49 303 aa11.44□□□□□ -0.58
MSH5-208ENST00000429846 RDH8Q9NYR8 311 aa11.44□□□□□ -0.58
MSH5-208ENST00000429846 C13orf42A0A1B0GVH6 325 aa11.43□□□□□ -0.58
MSH5-208ENST00000429846 TRDCB7Z8K6 153 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms