RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 GAR1Q9NY12 217 aaKnown RBP6.88□□□□□ -1.31
HPS4-205ENST00000429411 LY6G6EA0A0G2JKS1 128 aa6.87□□□□□ -1.31
HPS4-205ENST00000429411 SYNGR2O43760 224 aa6.87□□□□□ -1.31
HPS4-205ENST00000429411 SERPINA7P05543 415 aa6.87□□□□□ -1.31
HPS4-205ENST00000429411 OTX1P32242 354 aaPredicted RBP6.87□□□□□ -1.31
HPS4-205ENST00000429411 GPX4P36969 197 aaPredicted RBP6.87□□□□□ -1.31
HPS4-205ENST00000429411 TAS2R60P59551 318 aa6.87□□□□□ -1.31
HPS4-205ENST00000429411 ERVS71-1P61550 626 aa6.87□□□□□ -1.31
HPS4-205ENST00000429411 Q0VFX4 171 aa6.87□□□□□ -1.31
HPS4-205ENST00000429411 RNF212Q495C1 297 aa6.87□□□□□ -1.31
HPS4-205ENST00000429411 NUFIP2Q7Z417 695 aaKnown RBP6.87□□□□□ -1.31
HPS4-205ENST00000429411 GGNQ86UU5 652 aa6.87□□□□□ -1.31
HPS4-205ENST00000429411 CCDC54Q8NEL0 328 aa6.87□□□□□ -1.31
HPS4-205ENST00000429411 C18orf12Q96KH6 178 aa6.87□□□□□ -1.31
HPS4-205ENST00000429411 GINS3Q9BRX5 216 aa6.87□□□□□ -1.31
HPS4-205ENST00000429411 OR2J1Q9GZK6 312 aa6.87□□□□□ -1.31
HPS4-205ENST00000429411 Q9N2K0 584 aa6.87□□□□□ -1.31
HPS4-205ENST00000429411 WASF3Q9UPY6 502 aa6.87□□□□□ -1.31
HPS4-205ENST00000429411 LAMP3Q9UQV4 416 aa6.87□□□□□ -1.31
HPS4-205ENST00000429411 U3KQA8 63 aa6.87□□□□□ -1.31
HPS4-205ENST00000429411 DOPEY2Q9Y3R5 2298 aa6.87□□□□□ -1.31
HPS4-205ENST00000429411 CEACAM18A8MTB9 384 aa6.87□□□□□ -1.31
HPS4-205ENST00000429411 SLC31A2O15432 143 aa6.87□□□□□ -1.31
HPS4-205ENST00000429411 IFNA1P01562 189 aa6.87□□□□□ -1.31
HPS4-205ENST00000429411 G6PCP35575 357 aa6.87□□□□□ -1.31
HPS4-205ENST00000429411 FGF12P61328 243 aa6.87□□□□□ -1.31
HPS4-205ENST00000429411 TGFBR3Q03167 851 aa6.87□□□□□ -1.31
HPS4-205ENST00000429411 OR2M7Q8NG81 312 aa6.87□□□□□ -1.31
HPS4-205ENST00000429411 MRGPRDQ8TDS7 321 aa6.87□□□□□ -1.31
HPS4-205ENST00000429411 PACRGQ96M98 296 aaPredicted RBP6.87□□□□□ -1.31
HPS4-205ENST00000429411 ATP5SQ99766 215 aa6.87□□□□□ -1.31
HPS4-205ENST00000429411 RPRMQ9NS64 109 aa6.87□□□□□ -1.31
HPS4-205ENST00000429411 LYRM2Q9NU23 88 aaPredicted RBP6.87□□□□□ -1.31
HPS4-205ENST00000429411 DOK5Q9P104 306 aa6.87□□□□□ -1.31
HPS4-205ENST00000429411 CLN8Q9UBY8 286 aa6.87□□□□□ -1.31
HPS4-205ENST00000429411 MAP1LC3B2A6NCE7 125 aa6.86□□□□□ -1.31
HPS4-205ENST00000429411 AGFG2O95081 481 aa6.86□□□□□ -1.31
HPS4-205ENST00000429411 CTXN2P0C2S0 81 aa6.86□□□□□ -1.31
HPS4-205ENST00000429411 HLA-DRB3P79483 266 aa6.86□□□□□ -1.31
HPS4-205ENST00000429411 IL15RAQ13261 267 aa6.86□□□□□ -1.31
HPS4-205ENST00000429411 SLC10A1Q14973 349 aa6.86□□□□□ -1.31
HPS4-205ENST00000429411 OR8G1Q15617 311 aa6.86□□□□□ -1.31
HPS4-205ENST00000429411 CRIP3Q6Q6R5 217 aa6.86□□□□□ -1.31
HPS4-205ENST00000429411 SMIM15Q7Z3B0 74 aa6.86□□□□□ -1.31
HPS4-205ENST00000429411 C1orf87Q8N0U7 546 aa6.86□□□□□ -1.31
HPS4-205ENST00000429411 SNIP1Q8TAD8 396 aaKnown RBP6.86□□□□□ -1.31
HPS4-205ENST00000429411 TMEM37Q8WXS4 190 aa6.86□□□□□ -1.31
HPS4-205ENST00000429411 FAM210BQ96KR6 192 aa6.86□□□□□ -1.31
HPS4-205ENST00000429411 FAM173AQ9BQD7 235 aa6.86□□□□□ -1.31
HPS4-205ENST00000429411 TMEM204Q9BSN7 226 aa6.86□□□□□ -1.31
HPS4-205ENST00000429411 MAP1LC3BQ9GZQ8 125 aa6.86□□□□□ -1.31
HPS4-205ENST00000429411 OR2D2Q9H210 308 aa6.86□□□□□ -1.31
HPS4-205ENST00000429411 HIPK2Q9H2X6 1198 aa6.86□□□□□ -1.31
HPS4-205ENST00000429411 VSIRQ9H7M9 311 aa6.86□□□□□ -1.31
HPS4-205ENST00000429411 ZNF71Q9NQZ8 489 aaPredicted RBP6.86□□□□□ -1.31
HPS4-205ENST00000429411 SEMA5BQ9P283 1151 aa6.86□□□□□ -1.31
HPS4-205ENST00000429411 GNG12Q9UBI6 72 aa6.86□□□□□ -1.31
HPS4-205ENST00000429411 OR2W1Q9Y3N9 320 aa6.86□□□□□ -1.31
HPS4-205ENST00000429411 POLQO75417 2590 aa6.86□□□□□ -1.31
HPS4-205ENST00000429411 A0A0G2JRQ6 117 aa6.86□□□□□ -1.31
HPS4-205ENST00000429411 LRRC3CA6NJW4 275 aa6.86□□□□□ -1.31
HPS4-205ENST00000429411 PHOX2AO14813 284 aa6.86□□□□□ -1.31
HPS4-205ENST00000429411 TIMM8AO60220 97 aaPredicted RBP6.86□□□□□ -1.31
HPS4-205ENST00000429411 TMEM50AO95807 157 aa6.86□□□□□ -1.31
HPS4-205ENST00000429411 IFNA10P01566 189 aa6.86□□□□□ -1.31
HPS4-205ENST00000429411 HEXAP06865 529 aa6.86□□□□□ -1.31
HPS4-205ENST00000429411 EGR1P18146 543 aa6.86□□□□□ -1.31
HPS4-205ENST00000429411 MEOX1P50221 254 aa6.86□□□□□ -1.31
HPS4-205ENST00000429411 CCL11P51671 97 aa6.86□□□□□ -1.31
HPS4-205ENST00000429411 EDDM3BP56851 147 aa6.86□□□□□ -1.31
HPS4-205ENST00000429411 AESQ08117 197 aa6.86□□□□□ -1.31
HPS4-205ENST00000429411 CEACAM21Q3KPI0 293 aa6.86□□□□□ -1.31
HPS4-205ENST00000429411 C20orf204Q6ZNR8 217 aa6.86□□□□□ -1.31
HPS4-205ENST00000429411 MDP1Q86V88 176 aa6.86□□□□□ -1.31
HPS4-205ENST00000429411 DPF1Q92782 380 aa6.86□□□□□ -1.31
HPS4-205ENST00000429411 C5orf30Q96GV9 206 aa6.86□□□□□ -1.31
HPS4-205ENST00000429411 IL17BQ9UHF5 180 aa6.86□□□□□ -1.31
HPS4-205ENST00000429411 MED12LQ86YW9 2145 aa6.86□□□□□ -1.31
HPS4-205ENST00000429411 A0A1B0GW15 77 aa6.86□□□□□ -1.31
HPS4-205ENST00000429411 TMEM238C9JI98 176 aa6.86□□□□□ -1.31
HPS4-205ENST00000429411 PITX3O75364 302 aa6.86□□□□□ -1.31
HPS4-205ENST00000429411 LYL1P12980 280 aa6.86□□□□□ -1.31
HPS4-205ENST00000429411 PMELP40967 661 aa6.86□□□□□ -1.31
HPS4-205ENST00000429411 SLC38A11Q08AI6 406 aa6.86□□□□□ -1.31
HPS4-205ENST00000429411 EIF3IQ13347 325 aaKnown RBP6.86□□□□□ -1.31
HPS4-205ENST00000429411 PRAMEF5Q5TYX0 476 aa6.86□□□□□ -1.31
HPS4-205ENST00000429411 GFI1BQ5VTD9 330 aa6.86□□□□□ -1.31
HPS4-205ENST00000429411 PRAMEF6Q5VXH4 476 aa6.86□□□□□ -1.31
HPS4-205ENST00000429411 FAM53AQ6NSI3 398 aaPredicted RBP6.86□□□□□ -1.31
HPS4-205ENST00000429411 LRP11Q86VZ4 500 aa6.86□□□□□ -1.31
HPS4-205ENST00000429411 TMEM251Q8N6I4 163 aa6.86□□□□□ -1.31
HPS4-205ENST00000429411 RHOVQ96L33 236 aa6.86□□□□□ -1.31
HPS4-205ENST00000429411 WFIKKN1Q96NZ8 548 aa6.86□□□□□ -1.31
HPS4-205ENST00000429411 TPPP3Q9BW30 176 aa6.86□□□□□ -1.31
HPS4-205ENST00000429411 RTL8AQ9BWD3 113 aa6.86□□□□□ -1.31
HPS4-205ENST00000429411 TTTY12Q9BZ98 90 aa6.86□□□□□ -1.31
HPS4-205ENST00000429411 MSL2Q9HCI7 577 aa6.86□□□□□ -1.31
HPS4-205ENST00000429411 ZNF391Q9UJN7 358 aa6.86□□□□□ -1.31
HPS4-205ENST00000429411 ANAPC10Q9UM13 185 aa6.86□□□□□ -1.31
HPS4-205ENST00000429411 MED13LQ71F56 2210 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms