RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 RAB40CQ96S21 281 aa10.56□□□□□ -0.72
CDH3-202ENST00000429102 PARLQ9H300 379 aa10.56□□□□□ -0.72
CDH3-202ENST00000429102 IL17BQ9UHF5 180 aa10.56□□□□□ -0.72
CDH3-202ENST00000429102 S1PR2O95136 353 aa10.56□□□□□ -0.72
CDH3-202ENST00000429102 FGF5P12034 268 aa10.56□□□□□ -0.72
CDH3-202ENST00000429102 WNT5AP41221 380 aa10.56□□□□□ -0.72
CDH3-202ENST00000429102 GNG3P63215 75 aa10.56□□□□□ -0.72
CDH3-202ENST00000429102 DCAF12Q5T6F0 453 aa10.56□□□□□ -0.72
CDH3-202ENST00000429102 ASPHD1Q5U4P2 390 aa10.56□□□□□ -0.72
CDH3-202ENST00000429102 ZNF324BQ6AW86 544 aaPredicted RBP10.56□□□□□ -0.72
CDH3-202ENST00000429102 ASCL4Q6XD76 172 aa10.56□□□□□ -0.72
CDH3-202ENST00000429102 MDP1Q86V88 176 aa10.56□□□□□ -0.72
CDH3-202ENST00000429102 KCNE4Q8WWG9 221 aa10.56□□□□□ -0.72
CDH3-202ENST00000429102 MALSU1Q96EH3 234 aa10.56□□□□□ -0.72
CDH3-202ENST00000429102 WDYHV1Q96HA8 205 aa10.56□□□□□ -0.72
CDH3-202ENST00000429102 VAX2Q9UIW0 290 aa10.56□□□□□ -0.72
CDH3-202ENST00000429102 ST8SIA5O15466 376 aa10.55□□□□□ -0.72
CDH3-202ENST00000429102 RPL30P62888 115 aaKnown RBP10.55□□□□□ -0.72
CDH3-202ENST00000429102 H1FOOQ8IZA3 346 aaPredicted RBP10.55□□□□□ -0.72
CDH3-202ENST00000429102 TUBG2Q9NRH3 451 aa10.55□□□□□ -0.72
CDH3-202ENST00000429102 LOXL2Q9Y4K0 774 aa10.55□□□□□ -0.72
CDH3-202ENST00000429102 PLCE1Q9P212 2302 aa10.55□□□□□ -0.72
CDH3-202ENST00000429102 GNB2P62879 340 aa10.55□□□□□ -0.72
CDH3-202ENST00000429102 MEF2BQ02080 365 aaPredicted RBP10.55□□□□□ -0.72
CDH3-202ENST00000429102 ZNF585BQ52M93 769 aa10.55□□□□□ -0.72
CDH3-202ENST00000429102 NINJ1Q92982 152 aa10.55□□□□□ -0.72
CDH3-202ENST00000429102 YPEL4Q96NS1 127 aa10.55□□□□□ -0.72
CDH3-202ENST00000429102 IFNA1P01562 189 aa10.54□□□□□ -0.72
CDH3-202ENST00000429102 SSTR5P35346 364 aa10.54□□□□□ -0.72
CDH3-202ENST00000429102 MPLP40238 635 aa10.54□□□□□ -0.72
CDH3-202ENST00000429102 CD81P60033 236 aa10.54□□□□□ -0.72
CDH3-202ENST00000429102 SLC35B1P78383 322 aa10.54□□□□□ -0.72
CDH3-202ENST00000429102 FOXO1Q12778 655 aa10.54□□□□□ -0.72
CDH3-202ENST00000429102 OR1C1Q15619 314 aa10.54□□□□□ -0.72
CDH3-202ENST00000429102 Q3ZCU0 254 aa10.54□□□□□ -0.72
CDH3-202ENST00000429102 PRAMEF6Q5VXH4 476 aa10.54□□□□□ -0.72
CDH3-202ENST00000429102 ZNF573Q86YE8 665 aa10.54□□□□□ -0.72
CDH3-202ENST00000429102 LEAP2Q969E1 77 aa10.54□□□□□ -0.72
CDH3-202ENST00000429102 RAB24Q969Q5 203 aa10.54□□□□□ -0.72
CDH3-202ENST00000429102 C11orf1Q9H5F2 150 aa10.54□□□□□ -0.72
CDH3-202ENST00000429102 TMEM9BQ9NQ34 198 aa10.54□□□□□ -0.72
CDH3-202ENST00000429102 PLSCR2Q9NRY7 297 aa10.54□□□□□ -0.72
CDH3-202ENST00000429102 BOKQ9UMX3 212 aaPredicted RBP10.54□□□□□ -0.72
CDH3-202ENST00000429102 PSG11Q9UQ72 335 aa10.54□□□□□ -0.72
CDH3-202ENST00000429102 TNCP24821 2201 aa10.54□□□□□ -0.72
CDH3-202ENST00000429102 MED13LQ71F56 2210 aa10.54□□□□□ -0.72
CDH3-202ENST00000429102 LOC102723996A0A087X1L8 192 aa10.54□□□□□ -0.72
CDH3-202ENST00000429102 AMBPP02760 352 aa10.54□□□□□ -0.72
CDH3-202ENST00000429102 RAC2P15153 192 aa10.54□□□□□ -0.72
CDH3-202ENST00000429102 SSMEM1Q8WWF3 244 aa10.54□□□□□ -0.72
CDH3-202ENST00000429102 WDR61Q9GZS3 305 aaKnown RBP10.54□□□□□ -0.72
CDH3-202ENST00000429102 WDR54Q9H977 334 aa10.54□□□□□ -0.72
CDH3-202ENST00000429102 C17orf98A8MV24 154 aa10.54□□□□□ -0.72
CDH3-202ENST00000429102 CTXN2P0C2S0 81 aa10.54□□□□□ -0.72
CDH3-202ENST00000429102 OR51I2Q9H344 312 aa10.54□□□□□ -0.72
CDH3-202ENST00000429102 NCKAP5O14513 1909 aa10.54□□□□□ -0.72
CDH3-202ENST00000429102 NDUFB4O95168 129 aa10.53□□□□□ -0.72
CDH3-202ENST00000429102 ATP5G3P48201 142 aa10.53□□□□□ -0.72
CDH3-202ENST00000429102 RPL23P62829 140 aaKnown RBP10.53□□□□□ -0.72
CDH3-202ENST00000429102 TMEM41BQ5BJD5 291 aa10.53□□□□□ -0.72
CDH3-202ENST00000429102 VHLLQ6RSH7 139 aa10.53□□□□□ -0.72
CDH3-202ENST00000429102 SCCPDHQ8NBX0 429 aa10.53□□□□□ -0.72
CDH3-202ENST00000429102 IMMP2LQ96T52 175 aa10.53□□□□□ -0.72
CDH3-202ENST00000429102 PSPNO60542 156 aa10.53□□□□□ -0.72
CDH3-202ENST00000429102 OR4A8P0C604 315 aa10.53□□□□□ -0.72
CDH3-202ENST00000429102 C1QL4Q86Z23 238 aa10.53□□□□□ -0.72
CDH3-202ENST00000429102 LURAP1LQ8IV03 231 aa10.53□□□□□ -0.72
CDH3-202ENST00000429102 OR2M7Q8NG81 312 aa10.53□□□□□ -0.72
CDH3-202ENST00000429102 OR10P1Q8NGE3 313 aa10.53□□□□□ -0.72
CDH3-202ENST00000429102 OR5A2Q8NGI9 324 aa10.53□□□□□ -0.72
CDH3-202ENST00000429102 PRDM14Q9GZV8 571 aa10.53□□□□□ -0.72
CDH3-202ENST00000429102 SIRT7Q9NRC8 400 aa10.53□□□□□ -0.72
CDH3-202ENST00000429102 KCNIP1Q9NZI2 227 aa10.53□□□□□ -0.72
CDH3-202ENST00000429102 TRAV34A0A0B4J273 112 aa10.53□□□□□ -0.72
CDH3-202ENST00000429102 SLC25A6P12236 298 aa10.53□□□□□ -0.72
CDH3-202ENST00000429102 PKIAP61925 76 aa10.53□□□□□ -0.72
CDH3-202ENST00000429102 ZFP36L1Q07352 338 aaKnown RBP10.53□□□□□ -0.72
CDH3-202ENST00000429102 MRGPRGQ86SM5 289 aa10.53□□□□□ -0.72
CDH3-202ENST00000429102 ZNF664Q8N3J9 261 aa10.53□□□□□ -0.72
CDH3-202ENST00000429102 TMEM251Q8N6I4 163 aa10.53□□□□□ -0.72
CDH3-202ENST00000429102 SNIP1Q8TAD8 396 aaKnown RBP10.53□□□□□ -0.72
CDH3-202ENST00000429102 CISD1Q9NZ45 108 aaKnown RBP10.53□□□□□ -0.72
CDH3-202ENST00000429102 IL36GQ9NZH8 169 aa10.53□□□□□ -0.72
CDH3-202ENST00000429102 A0A1W2PPV4 95 aa10.52□□□□□ -0.72
CDH3-202ENST00000429102 ACTL6BO94805 426 aa10.52□□□□□ -0.72
CDH3-202ENST00000429102 GYPAP02724 150 aa10.52□□□□□ -0.72
CDH3-202ENST00000429102 C1QTNF9P0C862 333 aa10.52□□□□□ -0.72
CDH3-202ENST00000429102 ZNF25P17030 456 aaPredicted RBP10.52□□□□□ -0.72
CDH3-202ENST00000429102 PILRBQ9UKJ0 227 aa10.52□□□□□ -0.72
CDH3-202ENST00000429102 EXPH5Q8NEV8 1989 aa10.52□□□□□ -0.73
CDH3-202ENST00000429102 ODAMA1E959 279 aa10.52□□□□□ -0.73
CDH3-202ENST00000429102 C11orf94C9JXX5 98 aa10.52□□□□□ -0.73
CDH3-202ENST00000429102 FOSL1P15407 271 aa10.52□□□□□ -0.73
CDH3-202ENST00000429102 LRRC75BQ2VPJ9 315 aa10.52□□□□□ -0.73
CDH3-202ENST00000429102 C6orf15Q6UXA7 325 aaPredicted RBP10.52□□□□□ -0.73
CDH3-202ENST00000429102 H2BFWTQ7Z2G1 175 aa10.52□□□□□ -0.73
CDH3-202ENST00000429102 OR1P1Q8NH06 330 aa10.52□□□□□ -0.73
CDH3-202ENST00000429102 POM121L2Q96KW2 1035 aa10.52□□□□□ -0.73
CDH3-202ENST00000429102 CDH20Q9HBT6 801 aa10.52□□□□□ -0.73
CDH3-202ENST00000429102 DUSP13Q9UII6 198 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms