RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 C12orf77C9JDV5 145 aa7.03□□□□□ -1.28
CD44-208ENST00000428726 CLN5O75503 358 aa7.03□□□□□ -1.28
CD44-208ENST00000428726 CLDN1O95832 211 aa7.03□□□□□ -1.28
CD44-208ENST00000428726 CTXN2P0C2S0 81 aa7.03□□□□□ -1.28
CD44-208ENST00000428726 DVL1P1P54792 670 aaPredicted RBP7.03□□□□□ -1.28
CD44-208ENST00000428726 B2MP61769 119 aa7.03□□□□□ -1.28
CD44-208ENST00000428726 ZNF674Q2M3X9 581 aa7.03□□□□□ -1.28
CD44-208ENST00000428726 LHFPL4Q7Z7J7 247 aa7.03□□□□□ -1.28
CD44-208ENST00000428726 FAM122AQ96E09 287 aa7.03□□□□□ -1.28
CD44-208ENST00000428726 GMPPAQ96IJ6 420 aaPredicted RBP7.03□□□□□ -1.28
CD44-208ENST00000428726 C19orf12Q9NSK7 152 aa7.03□□□□□ -1.28
CD44-208ENST00000428726 ATP23Q9Y6H3 246 aa7.03□□□□□ -1.28
CD44-208ENST00000428726 USP9YO00507 2555 aaPredicted RBP7.02□□□□□ -1.28
CD44-208ENST00000428726 SETD2Q9BYW2 2564 aaPredicted RBP7.02□□□□□ -1.28
CD44-208ENST00000428726 MMP9P14780 707 aa7.02□□□□□ -1.29
CD44-208ENST00000428726 SULT1A2P50226 295 aa7.02□□□□□ -1.29
CD44-208ENST00000428726 IL13RA2Q14627 380 aa7.02□□□□□ -1.29
CD44-208ENST00000428726 TESK1Q15569 626 aa7.02□□□□□ -1.29
CD44-208ENST00000428726 ACSF3Q4G176 576 aaPredicted RBP7.02□□□□□ -1.29
CD44-208ENST00000428726 GPR157Q5UAW9 335 aa7.02□□□□□ -1.29
CD44-208ENST00000428726 Q6P435 159 aa7.02□□□□□ -1.29
CD44-208ENST00000428726 ZADH2Q8N4Q0 377 aa7.02□□□□□ -1.29
CD44-208ENST00000428726 DRAM1Q8N682 238 aa7.02□□□□□ -1.29
CD44-208ENST00000428726 TMEM252Q8N6L7 170 aa7.02□□□□□ -1.29
CD44-208ENST00000428726 NECAP1Q8NC96 275 aa7.02□□□□□ -1.29
CD44-208ENST00000428726 SNIP1Q8TAD8 396 aaKnown RBP7.02□□□□□ -1.29
CD44-208ENST00000428726 RND1Q92730 232 aa7.02□□□□□ -1.29
CD44-208ENST00000428726 OR2V2Q96R30 315 aa7.02□□□□□ -1.29
CD44-208ENST00000428726 GNG12Q9UBI6 72 aa7.02□□□□□ -1.29
CD44-208ENST00000428726 PROCRQ9UNN8 238 aa7.02□□□□□ -1.29
CD44-208ENST00000428726 OR2W1Q9Y3N9 320 aa7.02□□□□□ -1.29
CD44-208ENST00000428726 SMCO3A2RU48 225 aa7.02□□□□□ -1.29
CD44-208ENST00000428726 TNFSF13O75888 250 aa7.02□□□□□ -1.29
CD44-208ENST00000428726 OR2C1O95371 312 aa7.02□□□□□ -1.29
CD44-208ENST00000428726 HBZP02008 142 aa7.02□□□□□ -1.29
CD44-208ENST00000428726 CD5P06127 495 aa7.02□□□□□ -1.29
CD44-208ENST00000428726 RND3P61587 244 aa7.02□□□□□ -1.29
CD44-208ENST00000428726 MRPL49Q13405 166 aaKnown RBP7.02□□□□□ -1.29
CD44-208ENST00000428726 Q6ZT83 130 aa7.02□□□□□ -1.29
CD44-208ENST00000428726 UBAC2Q8NBM4 344 aa7.02□□□□□ -1.29
CD44-208ENST00000428726 ITLN1Q8WWA0 313 aa7.02□□□□□ -1.29
CD44-208ENST00000428726 PRO1933Q9H354 126 aa7.02□□□□□ -1.29
CD44-208ENST00000428726 TMPRSS5Q9H3S3 457 aa7.02□□□□□ -1.29
CD44-208ENST00000428726 FAM212BQ9NTI7 297 aaPredicted RBP7.02□□□□□ -1.29
CD44-208ENST00000428726 TAAR3PQ9P1P4 343 aa7.02□□□□□ -1.29
CD44-208ENST00000428726 TP53TG5Q9Y2B4 290 aa7.02□□□□□ -1.29
CD44-208ENST00000428726 J3QT63 122 aa7.01□□□□□ -1.29
CD44-208ENST00000428726 GPR137BO60478 399 aa7.01□□□□□ -1.29
CD44-208ENST00000428726 S1PR2O95136 353 aa7.01□□□□□ -1.29
CD44-208ENST00000428726 RAB5AP20339 215 aa7.01□□□□□ -1.29
CD44-208ENST00000428726 F2RP25116 425 aa7.01□□□□□ -1.29
CD44-208ENST00000428726 CD82P27701 267 aa7.01□□□□□ -1.29
CD44-208ENST00000428726 SNCAP37840 140 aa7.01□□□□□ -1.29
CD44-208ENST00000428726 P2RY1P47900 373 aa7.01□□□□□ -1.29
CD44-208ENST00000428726 IL24Q13007 206 aa7.01□□□□□ -1.29
CD44-208ENST00000428726 SOHLH1Q5JUK2 328 aa7.01□□□□□ -1.29
CD44-208ENST00000428726 ASPHD1Q5U4P2 390 aa7.01□□□□□ -1.29
CD44-208ENST00000428726 PIP4P1Q86T03 277 aa7.01□□□□□ -1.29
CD44-208ENST00000428726 C5orf30Q96GV9 206 aa7.01□□□□□ -1.29
CD44-208ENST00000428726 CCL13Q99616 98 aa7.01□□□□□ -1.29
CD44-208ENST00000428726 SCNM1Q9BWG6 230 aa7.01□□□□□ -1.29
CD44-208ENST00000428726 PKIBQ9C010 78 aa7.01□□□□□ -1.29
CD44-208ENST00000428726 CLCF1Q9UBD9 225 aa7.01□□□□□ -1.29
CD44-208ENST00000428726 CSPG4Q6UVK1 2322 aa7.01□□□□□ -1.29
CD44-208ENST00000428726 TGIF2-C20orf24A0A0A6YYL0 155 aa7.01□□□□□ -1.29
CD44-208ENST00000428726 BORCS7-ASMTA0A0B4J1R7 106 aa7.01□□□□□ -1.29
CD44-208ENST00000428726 IGHV2OR16-5A0A0B4J2B6 119 aa7.01□□□□□ -1.29
CD44-208ENST00000428726 UBE2L5PA0A1B0GUS4 154 aa7.01□□□□□ -1.29
CD44-208ENST00000428726 J3QW42 95 aa7.01□□□□□ -1.29
CD44-208ENST00000428726 SLC31A2O15432 143 aa7.01□□□□□ -1.29
CD44-208ENST00000428726 CDS2O95674 445 aa7.01□□□□□ -1.29
CD44-208ENST00000428726 IGKV1-5P01602 117 aa7.01□□□□□ -1.29
CD44-208ENST00000428726 OR8U8P0C7N1 319 aa7.01□□□□□ -1.29
CD44-208ENST00000428726 TUBG1P23258 451 aa7.01□□□□□ -1.29
CD44-208ENST00000428726 TAGLN2P37802 199 aaKnown RBP7.01□□□□□ -1.29
CD44-208ENST00000428726 HLA-DRB3P79483 266 aa7.01□□□□□ -1.29
CD44-208ENST00000428726 ZNF324BQ6AW86 544 aaPredicted RBP7.01□□□□□ -1.29
CD44-208ENST00000428726 WDR82Q6UXN9 313 aa7.01□□□□□ -1.29
CD44-208ENST00000428726 ODF3L1Q8IXM7 274 aa7.01□□□□□ -1.29
CD44-208ENST00000428726 CD177Q8N6Q3 437 aa7.01□□□□□ -1.29
CD44-208ENST00000428726 CYB561D1Q8N8Q1 229 aa7.01□□□□□ -1.29
CD44-208ENST00000428726 GATAD1Q8WUU5 269 aa7.01□□□□□ -1.29
CD44-208ENST00000428726 COQ2Q96H96 371 aa7.01□□□□□ -1.29
CD44-208ENST00000428726 GNG13Q9P2W3 67 aa7.01□□□□□ -1.29
CD44-208ENST00000428726 CFAP46Q8IYW2 2715 aa7.01□□□□□ -1.29
CD44-208ENST00000428726 TRBV6-6A0A0A6YYG2 114 aa7.01□□□□□ -1.29
CD44-208ENST00000428726 TRAV3A0A0B4J244 114 aa7.01□□□□□ -1.29
CD44-208ENST00000428726 LINC00473A8K010 186 aa7.01□□□□□ -1.29
CD44-208ENST00000428726 SH2D1BO14796 132 aa7.01□□□□□ -1.29
CD44-208ENST00000428726 FCGR3BO75015 233 aa7.01□□□□□ -1.29
CD44-208ENST00000428726 IGLV2-14P01704 120 aa7.01□□□□□ -1.29
CD44-208ENST00000428726 GYPAP02724 150 aa7.01□□□□□ -1.29
CD44-208ENST00000428726 HNF1AP20823 631 aa7.01□□□□□ -1.29
CD44-208ENST00000428726 GCSAMLQ5JQS6 135 aa7.01□□□□□ -1.29
CD44-208ENST00000428726 C10orf91Q5T1B1 145 aa7.01□□□□□ -1.29
CD44-208ENST00000428726 BHLHA15Q7RTS1 189 aaPredicted RBP7.01□□□□□ -1.29
CD44-208ENST00000428726 C11orf53Q8IXP5 236 aa7.01□□□□□ -1.29
CD44-208ENST00000428726 FAM216BQ8N7L0 139 aa7.01□□□□□ -1.29
CD44-208ENST00000428726 OR4D5Q8NGN0 318 aa7.01□□□□□ -1.29
CD44-208ENST00000428726 EDARADDQ8WWZ3 215 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms