RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 ZNF660Q6AZW8 331 aaPredicted RBP11.98□□□□□ -0.49
SEC13-210ENST00000428626 ZNF383Q8NA42 475 aa11.98□□□□□ -0.49
SEC13-210ENST00000428626 NRG4Q8WWG1 115 aa11.98□□□□□ -0.49
SEC13-210ENST00000428626 CLCC1Q96S66 551 aa11.98□□□□□ -0.49
SEC13-210ENST00000428626 Q9N2K0 584 aa11.98□□□□□ -0.49
SEC13-210ENST00000428626 FOXA2Q9Y261 457 aaPredicted RBP11.98□□□□□ -0.49
SEC13-210ENST00000428626 OR5H14A6NHG9 310 aa11.97□□□□□ -0.49
SEC13-210ENST00000428626 SLC17A2O00624 439 aa11.97□□□□□ -0.49
SEC13-210ENST00000428626 OVOL1O14753 267 aa11.97□□□□□ -0.49
SEC13-210ENST00000428626 LY86O95711 162 aa11.97□□□□□ -0.49
SEC13-210ENST00000428626 IGHV3-11P01762 117 aa11.97□□□□□ -0.49
SEC13-210ENST00000428626 IGKV1-16P04430 117 aa11.97□□□□□ -0.49
SEC13-210ENST00000428626 CEACAM6P40199 344 aa11.97□□□□□ -0.49
SEC13-210ENST00000428626 INSL3P51460 131 aa11.97□□□□□ -0.49
SEC13-210ENST00000428626 SSBP2P81877 361 aaPredicted RBP11.97□□□□□ -0.49
SEC13-210ENST00000428626 TPBGQ13641 420 aa11.97□□□□□ -0.49
SEC13-210ENST00000428626 PSG5Q15238 335 aa11.97□□□□□ -0.49
SEC13-210ENST00000428626 PLAC9Q5JTB6 97 aa11.97□□□□□ -0.49
SEC13-210ENST00000428626 CD200R1LQ6Q8B3 271 aa11.97□□□□□ -0.49
SEC13-210ENST00000428626 MOB1BQ7L9L4 216 aa11.97□□□□□ -0.49
SEC13-210ENST00000428626 ARHGAP5-AS1Q96IT6 56 aa11.97□□□□□ -0.49
SEC13-210ENST00000428626 WASHC3Q9Y3C0 194 aa11.97□□□□□ -0.49
SEC13-210ENST00000428626 LINC01619G3V211 115 aa11.96□□□□□ -0.49
SEC13-210ENST00000428626 H7C2Y5 167 aa11.96□□□□□ -0.49
SEC13-210ENST00000428626 LGALS1P09382 135 aaKnown RBP11.96□□□□□ -0.49
SEC13-210ENST00000428626 ARSBP15848 533 aa11.96□□□□□ -0.49
SEC13-210ENST00000428626 SPNP16150 400 aa11.96□□□□□ -0.49
SEC13-210ENST00000428626 VEGFCP49767 419 aa11.96□□□□□ -0.49
SEC13-210ENST00000428626 AQP4P55087 323 aa11.96□□□□□ -0.49
SEC13-210ENST00000428626 ZNF429Q86V71 674 aa11.96□□□□□ -0.49
SEC13-210ENST00000428626 PPP1R27Q86WC6 154 aa11.96□□□□□ -0.49
SEC13-210ENST00000428626 SBSPONQ8IVN8 264 aa11.96□□□□□ -0.49
SEC13-210ENST00000428626 LFNGQ8NES3 379 aa11.96□□□□□ -0.49
SEC13-210ENST00000428626 ARPC1AQ92747 370 aa11.96□□□□□ -0.49
SEC13-210ENST00000428626 UFD1Q92890 307 aa11.96□□□□□ -0.49
SEC13-210ENST00000428626 PTX4Q96A99 478 aa11.96□□□□□ -0.49
SEC13-210ENST00000428626 MS4A10Q96PG2 267 aa11.96□□□□□ -0.49
SEC13-210ENST00000428626 PECRQ9BY49 303 aa11.96□□□□□ -0.49
SEC13-210ENST00000428626 DUSP21Q9H596 190 aa11.96□□□□□ -0.49
SEC13-210ENST00000428626 HSF4Q9ULV5 492 aa11.96□□□□□ -0.49
SEC13-210ENST00000428626 DYNC2H1Q8NCM8 4307 aaKnown RBP11.96□□□□□ -0.5
SEC13-210ENST00000428626 ARPC1BO15143 372 aaKnown RBP11.95□□□□□ -0.5
SEC13-210ENST00000428626 LDLRAD4O15165 306 aa11.95□□□□□ -0.5
SEC13-210ENST00000428626 SAP30O75446 220 aa11.95□□□□□ -0.5
SEC13-210ENST00000428626 CA2P00918 260 aa11.95□□□□□ -0.5
SEC13-210ENST00000428626 GSTP1P09211 210 aaKnown RBP11.95□□□□□ -0.5
SEC13-210ENST00000428626 CD3GP09693 182 aa11.95□□□□□ -0.5
SEC13-210ENST00000428626 ZBTB25P24278 435 aa11.95□□□□□ -0.5
SEC13-210ENST00000428626 MC5RP33032 325 aa11.95□□□□□ -0.5
SEC13-210ENST00000428626 FABP5Q01469 135 aa11.95□□□□□ -0.5
SEC13-210ENST00000428626 PLGLAQ15195 96 aa11.95□□□□□ -0.5
SEC13-210ENST00000428626 UNQ5815/PRO19632Q6UWF5 114 aa11.95□□□□□ -0.5
SEC13-210ENST00000428626 ABHD5Q8WTS1 349 aa11.95□□□□□ -0.5
SEC13-210ENST00000428626 C5orf30Q96GV9 206 aa11.95□□□□□ -0.5
SEC13-210ENST00000428626 RIMS4Q9H426 269 aaPredicted RBP11.95□□□□□ -0.5
SEC13-210ENST00000428626 PLGRKTQ9HBL7 147 aa11.95□□□□□ -0.5
SEC13-210ENST00000428626 METTL1Q9UBP6 276 aaKnown RBP11.95□□□□□ -0.5
SEC13-210ENST00000428626 KCNK7Q9Y2U2 307 aa11.95□□□□□ -0.5
SEC13-210ENST00000428626 SMAD5-AS1Q9Y6J3 95 aa11.95□□□□□ -0.5
SEC13-210ENST00000428626 RBBP9O75884 186 aa11.94□□□□□ -0.5
SEC13-210ENST00000428626 HSMCR30P0CW71 290 aa11.94□□□□□ -0.5
SEC13-210ENST00000428626 MAP2K4P45985 399 aa11.94□□□□□ -0.5
SEC13-210ENST00000428626 RAB11BQ15907 218 aa11.94□□□□□ -0.5
SEC13-210ENST00000428626 AKIRIN2Q53H80 203 aa11.94□□□□□ -0.5
SEC13-210ENST00000428626 ACTBL2Q562R1 376 aa11.94□□□□□ -0.5
SEC13-210ENST00000428626 ACSM6Q6P461 480 aa11.94□□□□□ -0.5
SEC13-210ENST00000428626 ZNF562Q6V9R5 426 aa11.94□□□□□ -0.5
SEC13-210ENST00000428626 OVCH2Q7RTZ1 564 aa11.94□□□□□ -0.5
SEC13-210ENST00000428626 HAPLN4Q86UW8 402 aa11.94□□□□□ -0.5
SEC13-210ENST00000428626 TCTEX1D1Q8N7M0 179 aa11.94□□□□□ -0.5
SEC13-210ENST00000428626 RHOVQ96L33 236 aa11.94□□□□□ -0.5
SEC13-210ENST00000428626 RNF5Q99942 180 aa11.94□□□□□ -0.5
SEC13-210ENST00000428626 URM1Q9BTM9 101 aaKnown RBP11.94□□□□□ -0.5
SEC13-210ENST00000428626 C12orf4Q9NQ89 552 aa11.94□□□□□ -0.5
SEC13-210ENST00000428626 SCN3BQ9NY72 215 aa11.94□□□□□ -0.5
SEC13-210ENST00000428626 TNCP24821 2201 aa11.94□□□□□ -0.5
SEC13-210ENST00000428626 TMEM272A0A1B0GTI8 110 aa11.93□□□□□ -0.5
SEC13-210ENST00000428626 SHISA3A0PJX4 238 aa11.93□□□□□ -0.5
SEC13-210ENST00000428626 TRIM64CA6NLI5 447 aa11.93□□□□□ -0.5
SEC13-210ENST00000428626 HSPA12AO43301 675 aa11.93□□□□□ -0.5
SEC13-210ENST00000428626 IGLV2-23P01705 113 aa11.93□□□□□ -0.5
SEC13-210ENST00000428626 CPEP16870 476 aa11.93□□□□□ -0.5
SEC13-210ENST00000428626 PJVKQ0ZLH3 352 aa11.93□□□□□ -0.5
SEC13-210ENST00000428626 C2orf76Q3KRA6 126 aa11.93□□□□□ -0.5
SEC13-210ENST00000428626 MOGAT2Q3SYC2 334 aa11.93□□□□□ -0.5
SEC13-210ENST00000428626 EDARADDQ8WWZ3 215 aa11.93□□□□□ -0.5
SEC13-210ENST00000428626 FAM3DQ96BQ1 224 aa11.93□□□□□ -0.5
SEC13-210ENST00000428626 CMSS1Q9BQ75 279 aaKnown RBP11.93□□□□□ -0.5
SEC13-210ENST00000428626 GHITMQ9H3K2 345 aa11.93□□□□□ -0.5
SEC13-210ENST00000428626 RDH8Q9NYR8 311 aa11.93□□□□□ -0.5
SEC13-210ENST00000428626 TENM2Q9NT68 2774 aa11.93□□□□□ -0.5
SEC13-210ENST00000428626 RYR2Q92736 4967 aa11.92□□□□□ -0.5
SEC13-210ENST00000428626 TRDCB7Z8K6 153 aa11.92□□□□□ -0.5
SEC13-210ENST00000428626 SLC25A17O43808 307 aa11.92□□□□□ -0.5
SEC13-210ENST00000428626 GP9P14770 177 aa11.92□□□□□ -0.5
SEC13-210ENST00000428626 CALRP27797 417 aaKnown RBP11.92□□□□□ -0.5
SEC13-210ENST00000428626 TPPP2P59282 170 aa11.92□□□□□ -0.5
SEC13-210ENST00000428626 RPS16P62249 146 aaKnown RBP11.92□□□□□ -0.5
SEC13-210ENST00000428626 TMEM267Q0VDI3 215 aaPredicted RBP11.92□□□□□ -0.5
SEC13-210ENST00000428626 MLLT11Q13015 90 aaPredicted RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms