RNA–Protein interactions for RNA: ENST00000428026.6

PTPRU-204, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-204ENST00000428026 BTF3P20290 206 aaKnown RBP12.54□□□□□ -0.4
PTPRU-204ENST00000428026 CD200R1LQ6Q8B3 271 aa12.54□□□□□ -0.4
PTPRU-204ENST00000428026 ABHD14BQ96IU4 210 aa12.54□□□□□ -0.4
PTPRU-204ENST00000428026 AQP10Q96PS8 301 aa12.54□□□□□ -0.4
PTPRU-204ENST00000428026 SF3B6Q9Y3B4 125 aaKnown RBP12.54□□□□□ -0.4
PTPRU-204ENST00000428026 FUT5Q11128 374 aa12.54□□□□□ -0.4
PTPRU-204ENST00000428026 GAB4Q2WGN9 574 aa12.54□□□□□ -0.4
PTPRU-204ENST00000428026 TMEM222Q9H0R3 208 aa12.54□□□□□ -0.4
PTPRU-204ENST00000428026 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.53□□□□□ -0.4
PTPRU-204ENST00000428026 LOC105371267A0A1B0GV96 52 aa12.53□□□□□ -0.4
PTPRU-204ENST00000428026 MPTX1A8MV57 137 aa12.53□□□□□ -0.4
PTPRU-204ENST00000428026 HBZP02008 142 aa12.53□□□□□ -0.4
PTPRU-204ENST00000428026 KRTCAP3Q53RY4 240 aa12.53□□□□□ -0.4
PTPRU-204ENST00000428026 LEMD1Q68G75 181 aa12.53□□□□□ -0.4
PTPRU-204ENST00000428026 SDHCQ99643 169 aaPredicted RBP12.53□□□□□ -0.4
PTPRU-204ENST00000428026 DNLZQ5SXM8 178 aa12.53□□□□□ -0.4
PTPRU-204ENST00000428026 PQLC2Q6ZP29 291 aa12.53□□□□□ -0.4
PTPRU-204ENST00000428026 REC114Q7Z4M0 266 aa12.53□□□□□ -0.4
PTPRU-204ENST00000428026 PRR7Q8TB68 274 aa12.53□□□□□ -0.4
PTPRU-204ENST00000428026 SAP25Q8TEE9 199 aa12.53□□□□□ -0.4
PTPRU-204ENST00000428026 NUDT16L1Q9BRJ7 211 aaKnown RBP12.53□□□□□ -0.4
PTPRU-204ENST00000428026 OR2J1Q9GZK6 312 aa12.53□□□□□ -0.4
PTPRU-204ENST00000428026 F11RQ9Y624 299 aaKnown RBP12.53□□□□□ -0.4
PTPRU-204ENST00000428026 GREB1LQ9C091 1923 aaPredicted RBP12.53□□□□□ -0.4
PTPRU-204ENST00000428026 ZIC3O60481 467 aa12.53□□□□□ -0.4
PTPRU-204ENST00000428026 CD1AP06126 327 aa12.53□□□□□ -0.4
PTPRU-204ENST00000428026 ASAH2BP0C7U1 165 aa12.53□□□□□ -0.4
PTPRU-204ENST00000428026 SPANXN1Q5VSR9 72 aa12.53□□□□□ -0.4
PTPRU-204ENST00000428026 MIC13Q5XKP0 118 aa12.53□□□□□ -0.4
PTPRU-204ENST00000428026 Q8WTZ3 238 aa12.53□□□□□ -0.4
PTPRU-204ENST00000428026 NPVFQ9HCQ7 196 aa12.53□□□□□ -0.4
PTPRU-204ENST00000428026 LOC285556D6RIA3 1793 aa12.53□□□□□ -0.4
PTPRU-204ENST00000428026 LEPROTL1O95214 131 aa12.53□□□□□ -0.4
PTPRU-204ENST00000428026 SRIP30626 198 aa12.53□□□□□ -0.4
PTPRU-204ENST00000428026 C5orf66Q9H5L9 145 aa12.53□□□□□ -0.4
PTPRU-204ENST00000428026 SAP30LQ9HAJ7 183 aa12.53□□□□□ -0.4
PTPRU-204ENST00000428026 FSTP19883 344 aa12.52□□□□□ -0.4
PTPRU-204ENST00000428026 RBKSQ9H477 322 aa12.52□□□□□ -0.4
PTPRU-204ENST00000428026 CNOT1A5YKK6 2376 aaKnown RBP12.52□□□□□ -0.4
PTPRU-204ENST00000428026 AGAP20933 346 aa12.52□□□□□ -0.4
PTPRU-204ENST00000428026 HOXA4Q00056 320 aaPredicted RBP12.52□□□□□ -0.4
PTPRU-204ENST00000428026 C12orf54Q6X4T0 127 aa12.52□□□□□ -0.4
PTPRU-204ENST00000428026 OIT3Q8WWZ8 545 aa12.52□□□□□ -0.4
PTPRU-204ENST00000428026 TAF15Q92804 592 aaKnown RBP eCLIP12.52□□□□□ -0.4
PTPRU-204ENST00000428026 CACNA1EQ15878 2313 aa12.52□□□□□ -0.41
PTPRU-204ENST00000428026 ZBTB34Q8NCN2 500 aa12.52□□□□□ -0.41
PTPRU-204ENST00000428026 OR1L8Q8NGR8 309 aa12.52□□□□□ -0.41
PTPRU-204ENST00000428026 DNASE2BQ8WZ79 361 aa12.52□□□□□ -0.41
PTPRU-204ENST00000428026 PARLQ9H300 379 aa12.52□□□□□ -0.41
PTPRU-204ENST00000428026 UPK3AO75631 287 aa12.52□□□□□ -0.41
PTPRU-204ENST00000428026 MT-ND6P03923 174 aa12.52□□□□□ -0.41
PTPRU-204ENST00000428026 COL10A1Q03692 680 aa12.52□□□□□ -0.41
PTPRU-204ENST00000428026 IZUMO4Q1ZYL8 232 aa12.52□□□□□ -0.41
PTPRU-204ENST00000428026 TMUB1Q9BVT8 246 aa12.52□□□□□ -0.41
PTPRU-204ENST00000428026 GSN-AS1Q9NRJ2 163 aa12.52□□□□□ -0.41
PTPRU-204ENST00000428026 FOXJ2Q9P0K8 574 aa12.52□□□□□ -0.41
PTPRU-204ENST00000428026 KBTBD11O94819 623 aa12.51□□□□□ -0.41
PTPRU-204ENST00000428026 STXBP6Q8NFX7 210 aa12.51□□□□□ -0.41
PTPRU-204ENST00000428026 OR10S1Q8NGN2 331 aa12.51□□□□□ -0.41
PTPRU-204ENST00000428026 AQP3Q92482 292 aa12.51□□□□□ -0.41
PTPRU-204ENST00000428026 PGLYRP4Q96LB8 373 aa12.51□□□□□ -0.41
PTPRU-204ENST00000428026 DSPPQ9NZW4 1301 aa12.51□□□□□ -0.41
PTPRU-204ENST00000428026 A8MWL6 223 aa12.51□□□□□ -0.41
PTPRU-204ENST00000428026 H0Y980 276 aa12.51□□□□□ -0.41
PTPRU-204ENST00000428026 KIR2DL2P43627 348 aaPredicted RBP12.51□□□□□ -0.41
PTPRU-204ENST00000428026 ERVFRD-1P60508 538 aa12.51□□□□□ -0.41
PTPRU-204ENST00000428026 CTAG1AP78358 180 aa12.51□□□□□ -0.41
PTPRU-204ENST00000428026 PMCHL1Q16048 86 aa12.51□□□□□ -0.41
PTPRU-204ENST00000428026 NPDC1Q9NQX5 325 aaPredicted RBP12.51□□□□□ -0.41
PTPRU-204ENST00000428026 ZNF256Q9Y2P7 627 aaPredicted RBP12.51□□□□□ -0.41
PTPRU-204ENST00000428026 A0A0B4J293 547 aa12.51□□□□□ -0.41
PTPRU-204ENST00000428026 SLC25A34Q6PIV7 304 aa12.51□□□□□ -0.41
PTPRU-204ENST00000428026 BHLHA15Q7RTS1 189 aaPredicted RBP12.51□□□□□ -0.41
PTPRU-204ENST00000428026 GPR146Q96CH1 333 aa12.51□□□□□ -0.41
PTPRU-204ENST00000428026 KCNE5Q9UJ90 142 aa12.51□□□□□ -0.41
PTPRU-204ENST00000428026 BRCA1P38398 1863 aaKnown RBP12.51□□□□□ -0.41
PTPRU-204ENST00000428026 CLDN14O95500 239 aa12.51□□□□□ -0.41
PTPRU-204ENST00000428026 SSTR5P35346 364 aa12.51□□□□□ -0.41
PTPRU-204ENST00000428026 OR5R1Q8NH85 324 aa12.51□□□□□ -0.41
PTPRU-204ENST00000428026 EAF1Q96JC9 268 aaPredicted RBP12.51□□□□□ -0.41
PTPRU-204ENST00000428026 COL25A1Q9BXS0 654 aaPredicted RBP12.51□□□□□ -0.41
PTPRU-204ENST00000428026 INSIG2Q9Y5U4 225 aa12.51□□□□□ -0.41
PTPRU-204ENST00000428026 EGR1P18146 543 aa12.51□□□□□ -0.41
PTPRU-204ENST00000428026 ZP1P60852 638 aa12.51□□□□□ -0.41
PTPRU-204ENST00000428026 DCAF10Q5QP82 559 aa12.51□□□□□ -0.41
PTPRU-204ENST00000428026 ATRAIDQ6UW56 229 aa12.51□□□□□ -0.41
PTPRU-204ENST00000428026 WFDC3Q8IUB2 231 aa12.51□□□□□ -0.41
PTPRU-204ENST00000428026 SGK494Q96LW2 274 aa12.51□□□□□ -0.41
PTPRU-204ENST00000428026 HIGD1AQ9Y241 93 aa12.51□□□□□ -0.41
PTPRU-204ENST00000428026 DHRS7CA6NNS2 312 aa12.5□□□□□ -0.41
PTPRU-204ENST00000428026 LNP1A1A4G5 178 aa12.5□□□□□ -0.41
PTPRU-204ENST00000428026 LDLRAD4O15165 306 aa12.5□□□□□ -0.41
PTPRU-204ENST00000428026 FOXS1O43638 330 aa12.5□□□□□ -0.41
PTPRU-204ENST00000428026 NEU1Q99519 415 aa12.5□□□□□ -0.41
PTPRU-204ENST00000428026 RNF7Q9UBF6 113 aa12.5□□□□□ -0.41
PTPRU-204ENST00000428026 METTL1Q9UBP6 276 aaKnown RBP12.5□□□□□ -0.41
PTPRU-204ENST00000428026 UNC119Q13432 240 aa12.5□□□□□ -0.41
PTPRU-204ENST00000428026 RBBP6Q7Z6E9 1792 aaKnown RBP12.5□□□□□ -0.41
PTPRU-204ENST00000428026 DANCRP0C864 163 aa12.5□□□□□ -0.41
PTPRU-204ENST00000428026 GLIPR1P48060 266 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms