RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 COA4Q9NYJ1 87 aa11.64□□□□□ -0.55
APOBEC3D-202ENST00000427494 LINC00473A8K010 186 aa11.63□□□□□ -0.55
APOBEC3D-202ENST00000427494 DFFBO76075 338 aa11.63□□□□□ -0.55
APOBEC3D-202ENST00000427494 CD5P06127 495 aa11.63□□□□□ -0.55
APOBEC3D-202ENST00000427494 SFTA3P0C7M3 94 aa11.63□□□□□ -0.55
APOBEC3D-202ENST00000427494 SNCAP37840 140 aa11.63□□□□□ -0.55
APOBEC3D-202ENST00000427494 DVL1P1P54792 670 aaPredicted RBP11.63□□□□□ -0.55
APOBEC3D-202ENST00000427494 MORN2Q502X0 79 aa11.63□□□□□ -0.55
APOBEC3D-202ENST00000427494 PUSL1Q8N0Z8 303 aaKnown RBP11.63□□□□□ -0.55
APOBEC3D-202ENST00000427494 COMMD1Q8N668 190 aa11.63□□□□□ -0.55
APOBEC3D-202ENST00000427494 GNPNAT1Q96EK6 184 aaPredicted RBP11.63□□□□□ -0.55
APOBEC3D-202ENST00000427494 SEC11CQ9BY50 192 aa11.63□□□□□ -0.55
APOBEC3D-202ENST00000427494 CALYQ9NYX4 217 aa11.63□□□□□ -0.55
APOBEC3D-202ENST00000427494 OR6C3Q9NZP0 311 aa11.63□□□□□ -0.55
APOBEC3D-202ENST00000427494 CACNA1DQ01668 2161 aa11.63□□□□□ -0.55
APOBEC3D-202ENST00000427494 FAM90A26D6RGX4 464 aa11.63□□□□□ -0.55
APOBEC3D-202ENST00000427494 OR4A8P0C604 315 aa11.63□□□□□ -0.55
APOBEC3D-202ENST00000427494 METTL15P1P0C7V9 234 aa11.63□□□□□ -0.55
APOBEC3D-202ENST00000427494 P0C879 139 aa11.63□□□□□ -0.55
APOBEC3D-202ENST00000427494 IRF2P14316 349 aa11.63□□□□□ -0.55
APOBEC3D-202ENST00000427494 LINC00205P59089 165 aa11.63□□□□□ -0.55
APOBEC3D-202ENST00000427494 UBE2KP61086 200 aa11.63□□□□□ -0.55
APOBEC3D-202ENST00000427494 RUNX1Q01196 453 aa11.63□□□□□ -0.55
APOBEC3D-202ENST00000427494 ZNF273Q14593 569 aa11.63□□□□□ -0.55
APOBEC3D-202ENST00000427494 STUMQ69YW2 141 aa11.63□□□□□ -0.55
APOBEC3D-202ENST00000427494 DUX4L9Q6RFH8 374 aaPredicted RBP11.63□□□□□ -0.55
APOBEC3D-202ENST00000427494 DEFB108BQ8NET1 73 aa11.63□□□□□ -0.55
APOBEC3D-202ENST00000427494 Q8TCH9 128 aa11.63□□□□□ -0.55
APOBEC3D-202ENST00000427494 C17orf50Q8WW18 174 aa11.63□□□□□ -0.55
APOBEC3D-202ENST00000427494 RBKSQ9H477 322 aa11.63□□□□□ -0.55
APOBEC3D-202ENST00000427494 DSCAMO60469 2012 aa11.63□□□□□ -0.55
APOBEC3D-202ENST00000427494 UMAD1C9J7I0 102 aa11.62□□□□□ -0.55
APOBEC3D-202ENST00000427494 C9JQL5 133 aa11.62□□□□□ -0.55
APOBEC3D-202ENST00000427494 DNASE2O00115 360 aaPredicted RBP11.62□□□□□ -0.55
APOBEC3D-202ENST00000427494 F2RL2O00254 374 aa11.62□□□□□ -0.55
APOBEC3D-202ENST00000427494 YPEL1O60688 119 aa11.62□□□□□ -0.55
APOBEC3D-202ENST00000427494 CLDN14O95500 239 aa11.62□□□□□ -0.55
APOBEC3D-202ENST00000427494 F12P00748 615 aaPredicted RBP11.62□□□□□ -0.55
APOBEC3D-202ENST00000427494 IFNA5P01569 189 aa11.62□□□□□ -0.55
APOBEC3D-202ENST00000427494 IGHV3-7P01780 117 aa11.62□□□□□ -0.55
APOBEC3D-202ENST00000427494 LOXL3P58215 753 aa11.62□□□□□ -0.55
APOBEC3D-202ENST00000427494 TAS2R30P59541 319 aa11.62□□□□□ -0.55
APOBEC3D-202ENST00000427494 TNFRSF9Q07011 255 aa11.62□□□□□ -0.55
APOBEC3D-202ENST00000427494 ADIPOQQ15848 244 aa11.62□□□□□ -0.55
APOBEC3D-202ENST00000427494 SLC25A24Q6NUK1 477 aa11.62□□□□□ -0.55
APOBEC3D-202ENST00000427494 RND1Q92730 232 aa11.62□□□□□ -0.55
APOBEC3D-202ENST00000427494 SDSLQ96GA7 329 aa11.62□□□□□ -0.55
APOBEC3D-202ENST00000427494 YPEL2Q96QA6 119 aa11.62□□□□□ -0.55
APOBEC3D-202ENST00000427494 DYSFO75923 2080 aa11.62□□□□□ -0.55
APOBEC3D-202ENST00000427494 RP1L1Q8IWN7 2480 aaPredicted RBP11.62□□□□□ -0.55
APOBEC3D-202ENST00000427494 A0A1B0GV50 99 aa11.61□□□□□ -0.55
APOBEC3D-202ENST00000427494 FAM74A7A6NL05 159 aa11.61□□□□□ -0.55
APOBEC3D-202ENST00000427494 LRRC30A6NM36 301 aa11.61□□□□□ -0.55
APOBEC3D-202ENST00000427494 GYPAP02724 150 aa11.61□□□□□ -0.55
APOBEC3D-202ENST00000427494 CCL8P80075 99 aa11.61□□□□□ -0.55
APOBEC3D-202ENST00000427494 FAM74A3Q4VXF1 159 aa11.61□□□□□ -0.55
APOBEC3D-202ENST00000427494 SPANXN5Q5MJ07 72 aa11.61□□□□□ -0.55
APOBEC3D-202ENST00000427494 ADAM5Q6NVV9 412 aa11.61□□□□□ -0.55
APOBEC3D-202ENST00000427494 TGIF2LYQ8IUE0 185 aa11.61□□□□□ -0.55
APOBEC3D-202ENST00000427494 GAFA1Q96PS6 74 aa11.61□□□□□ -0.55
APOBEC3D-202ENST00000427494 CCL13Q99616 98 aa11.61□□□□□ -0.55
APOBEC3D-202ENST00000427494 ABHD14AQ9BUJ0 271 aa11.61□□□□□ -0.55
APOBEC3D-202ENST00000427494 HSPB7Q9UBY9 170 aa11.61□□□□□ -0.55
APOBEC3D-202ENST00000427494 LAMP3Q9UQV4 416 aa11.61□□□□□ -0.55
APOBEC3D-202ENST00000427494 ATMQ13315 3056 aa11.61□□□□□ -0.55
APOBEC3D-202ENST00000427494 RAB29O14966 203 aa11.61□□□□□ -0.55
APOBEC3D-202ENST00000427494 ARL16Q0P5N6 197 aa11.61□□□□□ -0.55
APOBEC3D-202ENST00000427494 GUK1Q16774 197 aa11.61□□□□□ -0.55
APOBEC3D-202ENST00000427494 SSX8Q7RTT4 187 aa11.61□□□□□ -0.55
APOBEC3D-202ENST00000427494 H2BFWTQ7Z2G1 175 aa11.61□□□□□ -0.55
APOBEC3D-202ENST00000427494 FAM216AQ8WUB2 273 aa11.61□□□□□ -0.55
APOBEC3D-202ENST00000427494 DIRC2Q96SL1 478 aa11.61□□□□□ -0.55
APOBEC3D-202ENST00000427494 NCOR1P1Q9H4R4 102 aa11.61□□□□□ -0.55
APOBEC3D-202ENST00000427494 ZNF665Q9H7R5 613 aa11.61□□□□□ -0.55
APOBEC3D-202ENST00000427494 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.61□□□□□ -0.55
APOBEC3D-202ENST00000427494 DCAF16Q9NXF7 216 aa11.61□□□□□ -0.55
APOBEC3D-202ENST00000427494 RAXQ9Y2V3 346 aa11.61□□□□□ -0.55
APOBEC3D-202ENST00000427494 TANC2Q9HCD6 1990 aa11.61□□□□□ -0.55
APOBEC3D-202ENST00000427494 DIDO1Q9BTC0 2240 aaKnown RBP11.6□□□□□ -0.55
APOBEC3D-202ENST00000427494 BSNQ9UPA5 3926 aa11.6□□□□□ -0.55
APOBEC3D-202ENST00000427494 C17orf100A8MU93 164 aa11.6□□□□□ -0.55
APOBEC3D-202ENST00000427494 FAM157AC9JC47 383 aa11.6□□□□□ -0.55
APOBEC3D-202ENST00000427494 ATXN7O15265 892 aaPredicted RBP11.6□□□□□ -0.55
APOBEC3D-202ENST00000427494 CGB3P0DN86 165 aa11.6□□□□□ -0.55
APOBEC3D-202ENST00000427494 CGB7P0DN87 165 aa11.6□□□□□ -0.55
APOBEC3D-202ENST00000427494 TNFRSF1AP19438 455 aa11.6□□□□□ -0.55
APOBEC3D-202ENST00000427494 DUTP33316 252 aaKnown RBP11.6□□□□□ -0.55
APOBEC3D-202ENST00000427494 HBG1P69891 147 aa11.6□□□□□ -0.55
APOBEC3D-202ENST00000427494 HBG2P69892 147 aa11.6□□□□□ -0.55
APOBEC3D-202ENST00000427494 TAGLNQ01995 201 aaKnown RBP11.6□□□□□ -0.55
APOBEC3D-202ENST00000427494 PEA15Q15121 130 aa11.6□□□□□ -0.55
APOBEC3D-202ENST00000427494 C17orf58Q2M2W7 97 aa11.6□□□□□ -0.55
APOBEC3D-202ENST00000427494 AKR1C8PQ5T2L2 129 aa11.6□□□□□ -0.55
APOBEC3D-202ENST00000427494 NCR3LG1Q68D85 454 aa11.6□□□□□ -0.55
APOBEC3D-202ENST00000427494 HAPLN4Q86UW8 402 aa11.6□□□□□ -0.55
APOBEC3D-202ENST00000427494 LILRB2Q8N423 598 aa11.6□□□□□ -0.55
APOBEC3D-202ENST00000427494 ZNF525Q8N782 197 aa11.6□□□□□ -0.55
APOBEC3D-202ENST00000427494 FAM216BQ8N7L0 139 aa11.6□□□□□ -0.55
APOBEC3D-202ENST00000427494 WFIKKN1Q96NZ8 548 aa11.6□□□□□ -0.55
APOBEC3D-202ENST00000427494 EIF5A2Q9GZV4 153 aaKnown RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms