RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 ZNF826PQ6ZT77 177 aa8.99□□□□□ -0.97
CUX1-205ENST00000425244 MEGF10Q96KG7 1140 aa8.99□□□□□ -0.97
CUX1-205ENST00000425244 RSG1Q9BU20 258 aa8.99□□□□□ -0.97
CUX1-205ENST00000425244 FZR1Q9UM11 496 aa8.99□□□□□ -0.97
CUX1-205ENST00000425244 FAM215AQ9Y5M1 114 aa8.99□□□□□ -0.97
CUX1-205ENST00000425244 SH2D1BO14796 132 aa8.98□□□□□ -0.97
CUX1-205ENST00000425244 IGKV1-5P01602 117 aa8.98□□□□□ -0.97
CUX1-205ENST00000425244 MMP9P14780 707 aa8.98□□□□□ -0.97
CUX1-205ENST00000425244 TMEM11P17152 192 aa8.98□□□□□ -0.97
CUX1-205ENST00000425244 MPV17P39210 176 aa8.98□□□□□ -0.97
CUX1-205ENST00000425244 MDH2P40926 338 aaKnown RBP8.98□□□□□ -0.97
CUX1-205ENST00000425244 OR2B8PP59922 312 aa8.98□□□□□ -0.97
CUX1-205ENST00000425244 PSG7Q13046 419 aa8.98□□□□□ -0.97
CUX1-205ENST00000425244 HNF4GQ14541 408 aa8.98□□□□□ -0.97
CUX1-205ENST00000425244 KRTCAP3Q53RY4 240 aa8.98□□□□□ -0.97
CUX1-205ENST00000425244 FAM53AQ6NSI3 398 aaPredicted RBP8.98□□□□□ -0.97
CUX1-205ENST00000425244 ADAM5Q6NVV9 412 aa8.98□□□□□ -0.97
CUX1-205ENST00000425244 MOB1BQ7L9L4 216 aa8.98□□□□□ -0.97
CUX1-205ENST00000425244 ZNF808Q8N4W9 903 aaPredicted RBP8.98□□□□□ -0.97
CUX1-205ENST00000425244 KDF1Q8NAX2 398 aaPredicted RBP8.98□□□□□ -0.97
CUX1-205ENST00000425244 WNT9BO14905 357 aa8.98□□□□□ -0.97
CUX1-205ENST00000425244 ATXN7O15265 892 aaPredicted RBP8.98□□□□□ -0.97
CUX1-205ENST00000425244 DFFBO76075 338 aa8.98□□□□□ -0.97
CUX1-205ENST00000425244 RHEBQ15382 184 aa8.98□□□□□ -0.97
CUX1-205ENST00000425244 Q8IYB0 196 aa8.98□□□□□ -0.97
CUX1-205ENST00000425244 ZNF295-AS1Q8N0V1 137 aa8.98□□□□□ -0.97
CUX1-205ENST00000425244 ZNF610Q8N9Z0 462 aa8.98□□□□□ -0.97
CUX1-205ENST00000425244 SCGB1C1Q8TD33 95 aa8.98□□□□□ -0.97
CUX1-205ENST00000425244 RAB40CQ96S21 281 aa8.98□□□□□ -0.97
CUX1-205ENST00000425244 PSENENQ9NZ42 101 aa8.98□□□□□ -0.97
CUX1-205ENST00000425244 PRRG2O14669 202 aa8.97□□□□□ -0.97
CUX1-205ENST00000425244 SYNGR2O43760 224 aa8.97□□□□□ -0.97
CUX1-205ENST00000425244 HAND1O96004 215 aa8.97□□□□□ -0.97
CUX1-205ENST00000425244 PGA5P0DJD9 388 aa8.97□□□□□ -0.97
CUX1-205ENST00000425244 RAB5AP20339 215 aa8.97□□□□□ -0.97
CUX1-205ENST00000425244 BMP5P22003 454 aa8.97□□□□□ -0.97
CUX1-205ENST00000425244 TAS2R30P59541 319 aa8.97□□□□□ -0.97
CUX1-205ENST00000425244 TLE4Q04727 773 aa8.97□□□□□ -0.97
CUX1-205ENST00000425244 CYB561D1Q8N8Q1 229 aa8.97□□□□□ -0.97
CUX1-205ENST00000425244 OR1L1Q8NH94 360 aa8.97□□□□□ -0.97
CUX1-205ENST00000425244 RHOVQ96L33 236 aa8.97□□□□□ -0.97
CUX1-205ENST00000425244 LIN7CQ9NUP9 197 aaKnown RBP8.97□□□□□ -0.97
CUX1-205ENST00000425244 KIAA1456Q9P272 454 aa8.97□□□□□ -0.97
CUX1-205ENST00000425244 USF3Q68DE3 2245 aa8.97□□□□□ -0.97
CUX1-205ENST00000425244 CACNA1BQ00975 2339 aa8.97□□□□□ -0.97
CUX1-205ENST00000425244 PSPNO60542 156 aa8.97□□□□□ -0.97
CUX1-205ENST00000425244 FOLR2P14207 255 aa8.97□□□□□ -0.97
CUX1-205ENST00000425244 HOXC12P31275 282 aa8.97□□□□□ -0.97
CUX1-205ENST00000425244 OR3A1P47881 315 aa8.97□□□□□ -0.97
CUX1-205ENST00000425244 RAB2AP61019 212 aa8.97□□□□□ -0.97
CUX1-205ENST00000425244 ERVK11-1P61568 191 aa8.97□□□□□ -0.97
CUX1-205ENST00000425244 SPANXN5Q5MJ07 72 aa8.97□□□□□ -0.97
CUX1-205ENST00000425244 REC114Q7Z4M0 266 aa8.97□□□□□ -0.97
CUX1-205ENST00000425244 DRAM1Q8N682 238 aa8.97□□□□□ -0.97
CUX1-205ENST00000425244 FAM57AQ8TBR7 257 aa8.97□□□□□ -0.97
CUX1-205ENST00000425244 KLF14Q8TD94 323 aaPredicted RBP8.97□□□□□ -0.97
CUX1-205ENST00000425244 NCOR1P1Q9H4R4 102 aa8.97□□□□□ -0.97
CUX1-205ENST00000425244 KCNIP1Q9NZI2 227 aa8.97□□□□□ -0.97
CUX1-205ENST00000425244 GNG13Q9P2W3 67 aa8.97□□□□□ -0.97
CUX1-205ENST00000425244 A0A1W2PPE3 182 aa8.96□□□□□ -0.97
CUX1-205ENST00000425244 BTBD17A6NE02 478 aa8.96□□□□□ -0.97
CUX1-205ENST00000425244 ZNF727A8MUV8 499 aa8.96□□□□□ -0.97
CUX1-205ENST00000425244 KIAA1324LA8MWY0 1029 aaPredicted RBP8.96□□□□□ -0.97
CUX1-205ENST00000425244 H3BQ15 152 aa8.96□□□□□ -0.97
CUX1-205ENST00000425244 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.96□□□□□ -0.97
CUX1-205ENST00000425244 TNFSF13O75888 250 aa8.96□□□□□ -0.97
CUX1-205ENST00000425244 OR2C1O95371 312 aa8.96□□□□□ -0.97
CUX1-205ENST00000425244 PAX6P26367 422 aa8.96□□□□□ -0.97
CUX1-205ENST00000425244 TDGF1P3P51864 188 aa8.96□□□□□ -0.97
CUX1-205ENST00000425244 ARL16Q0P5N6 197 aa8.96□□□□□ -0.97
CUX1-205ENST00000425244 ZNF585BQ52M93 769 aa8.96□□□□□ -0.97
CUX1-205ENST00000425244 C1orf185Q5T7R7 199 aa8.96□□□□□ -0.97
CUX1-205ENST00000425244 LCN15Q6UWW0 184 aa8.96□□□□□ -0.97
CUX1-205ENST00000425244 DOLPP1Q86YN1 238 aa8.96□□□□□ -0.97
CUX1-205ENST00000425244 C2orf88Q9BSF0 95 aa8.96□□□□□ -0.97
CUX1-205ENST00000425244 PROCRQ9UNN8 238 aa8.96□□□□□ -0.97
CUX1-205ENST00000425244 A0A1B0GW64 132 aa8.96□□□□□ -0.98
CUX1-205ENST00000425244 NPIPB11E5RHQ5 1161 aa8.96□□□□□ -0.98
CUX1-205ENST00000425244 SCAF4O95104 1147 aaKnown RBP8.96□□□□□ -0.98
CUX1-205ENST00000425244 MBP02144 154 aa8.96□□□□□ -0.98
CUX1-205ENST00000425244 G0S2P27469 103 aa8.96□□□□□ -0.98
CUX1-205ENST00000425244 IL2RGP31785 369 aa8.96□□□□□ -0.98
CUX1-205ENST00000425244 TAGLN2P37802 199 aaKnown RBP8.96□□□□□ -0.98
CUX1-205ENST00000425244 FGF8P55075 233 aaPredicted RBP8.96□□□□□ -0.98
CUX1-205ENST00000425244 UBE2KP61086 200 aa8.96□□□□□ -0.98
CUX1-205ENST00000425244 RPS23P62266 143 aaKnown RBP8.96□□□□□ -0.98
CUX1-205ENST00000425244 AESQ08117 197 aa8.96□□□□□ -0.98
CUX1-205ENST00000425244 ICAM4Q14773 271 aa8.96□□□□□ -0.98
CUX1-205ENST00000425244 PRAMEF6Q5VXH4 476 aa8.96□□□□□ -0.98
CUX1-205ENST00000425244 Q6ZT83 130 aa8.96□□□□□ -0.98
CUX1-205ENST00000425244 OR52L2PQ8NGH6 319 aa8.96□□□□□ -0.98
CUX1-205ENST00000425244 RAB39BQ96DA2 213 aa8.96□□□□□ -0.98
CUX1-205ENST00000425244 STARD4Q96DR4 205 aa8.96□□□□□ -0.98
CUX1-205ENST00000425244 EGLN1Q9GZT9 426 aa8.96□□□□□ -0.98
CUX1-205ENST00000425244 VSIRQ9H7M9 311 aa8.96□□□□□ -0.98
CUX1-205ENST00000425244 WSB1Q9Y6I7 421 aa8.96□□□□□ -0.98
CUX1-205ENST00000425244 ZFYVE26Q68DK2 2539 aa8.96□□□□□ -0.98
CUX1-205ENST00000425244 ZFP92A6NM28 416 aa8.95□□□□□ -0.98
CUX1-205ENST00000425244 KRASP01116 189 aa8.95□□□□□ -0.98
CUX1-205ENST00000425244 SRP19P09132 144 aaKnown RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms