RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 LPAR2Q9HBW0 351 aa8.45□□□□□ -1.06
MDC1-205ENST00000425072 MMP26Q9NRE1 261 aa8.45□□□□□ -1.06
MDC1-205ENST00000425072 FAM212BQ9NTI7 297 aaPredicted RBP8.45□□□□□ -1.06
MDC1-205ENST00000425072 ALG5Q9Y673 324 aa8.45□□□□□ -1.06
MDC1-205ENST00000425072 IGHV2-26A0A0B4J1V2 119 aa8.44□□□□□ -1.06
MDC1-205ENST00000425072 C3orf85A0A1B0GTC6 90 aa8.44□□□□□ -1.06
MDC1-205ENST00000425072 HMX3A6NHT5 357 aa8.44□□□□□ -1.06
MDC1-205ENST00000425072 RNF223E7ERA6 249 aa8.44□□□□□ -1.06
MDC1-205ENST00000425072 J3QLI3 93 aa8.44□□□□□ -1.06
MDC1-205ENST00000425072 SSNA1O43805 119 aa8.44□□□□□ -1.06
MDC1-205ENST00000425072 ATG12O94817 140 aa8.44□□□□□ -1.06
MDC1-205ENST00000425072 HLA-AP01891 365 aaKnown RBP8.44□□□□□ -1.06
MDC1-205ENST00000425072 VSIG10L2P0DP72 767 aa8.44□□□□□ -1.06
MDC1-205ENST00000425072 F2RP25116 425 aa8.44□□□□□ -1.06
MDC1-205ENST00000425072 CEACAM3P40198 252 aa8.44□□□□□ -1.06
MDC1-205ENST00000425072 GNG10P50151 68 aa8.44□□□□□ -1.06
MDC1-205ENST00000425072 LGALS4P56470 323 aa8.44□□□□□ -1.06
MDC1-205ENST00000425072 SRPXP78539 464 aa8.44□□□□□ -1.06
MDC1-205ENST00000425072 PPP1R1AQ13522 171 aa8.44□□□□□ -1.06
MDC1-205ENST00000425072 DCAF12L2Q5VW00 463 aa8.44□□□□□ -1.06
MDC1-205ENST00000425072 LIN54Q6MZP7 749 aa8.44□□□□□ -1.06
MDC1-205ENST00000425072 FAM71F2Q6NXP2 309 aa8.44□□□□□ -1.06
MDC1-205ENST00000425072 TBC1D26Q86UD7 250 aa8.44□□□□□ -1.06
MDC1-205ENST00000425072 LGI3Q8N145 548 aa8.44□□□□□ -1.06
MDC1-205ENST00000425072 Q8N7P7 452 aa8.44□□□□□ -1.06
MDC1-205ENST00000425072 MITD1Q8WV92 249 aa8.44□□□□□ -1.06
MDC1-205ENST00000425072 CAPSLQ8WWF8 208 aa8.44□□□□□ -1.06
MDC1-205ENST00000425072 LEAP2Q969E1 77 aa8.44□□□□□ -1.06
MDC1-205ENST00000425072 ABHD14BQ96IU4 210 aa8.44□□□□□ -1.06
MDC1-205ENST00000425072 SDHAF2Q9NX18 166 aa8.44□□□□□ -1.06
MDC1-205ENST00000425072 PRELID3BQ9Y3B1 194 aa8.44□□□□□ -1.06
MDC1-205ENST00000425072 A0A1W2PPE3 182 aa8.43□□□□□ -1.06
MDC1-205ENST00000425072 VGLL3A8MV65 326 aa8.43□□□□□ -1.06
MDC1-205ENST00000425072 LEUTXA8MZ59 168 aa8.43□□□□□ -1.06
MDC1-205ENST00000425072 IFNA21P01568 189 aa8.43□□□□□ -1.06
MDC1-205ENST00000425072 IGLV1-47P01700 117 aa8.43□□□□□ -1.06
MDC1-205ENST00000425072 IGLV2-14P01704 120 aa8.43□□□□□ -1.06
MDC1-205ENST00000425072 IGHV3-7P01780 117 aa8.43□□□□□ -1.06
MDC1-205ENST00000425072 GAPDHP04406 335 aaKnown RBP8.43□□□□□ -1.06
MDC1-205ENST00000425072 SERPINE2P07093 398 aa8.43□□□□□ -1.06
MDC1-205ENST00000425072 RRASP10301 218 aa8.43□□□□□ -1.06
MDC1-205ENST00000425072 RPA2P15927 270 aa8.43□□□□□ -1.06
MDC1-205ENST00000425072 HTR1DP28221 377 aa8.43□□□□□ -1.06
MDC1-205ENST00000425072 KIR2DS2P43631 304 aa8.43□□□□□ -1.06
MDC1-205ENST00000425072 THBS3P49746 956 aa8.43□□□□□ -1.06
MDC1-205ENST00000425072 BCAP31P51572 246 aa8.43□□□□□ -1.06
MDC1-205ENST00000425072 UBE2E1P51965 193 aa8.43□□□□□ -1.06
MDC1-205ENST00000425072 CYB5R2Q6BCY4 276 aa8.43□□□□□ -1.06
MDC1-205ENST00000425072 VMO1Q7Z5L0 202 aa8.43□□□□□ -1.06
MDC1-205ENST00000425072 PNKDQ8N490 385 aa8.43□□□□□ -1.06
MDC1-205ENST00000425072 UXS1Q8NBZ7 420 aa8.43□□□□□ -1.06
MDC1-205ENST00000425072 CHAC2Q8WUX2 184 aa8.43□□□□□ -1.06
MDC1-205ENST00000425072 TMEM230Q96A57 120 aa8.43□□□□□ -1.06
MDC1-205ENST00000425072 SEC22CQ9BRL7 303 aa8.43□□□□□ -1.06
MDC1-205ENST00000425072 AIFM2Q9BRQ8 373 aa8.43□□□□□ -1.06
MDC1-205ENST00000425072 PCGF1Q9BSM1 259 aa8.43□□□□□ -1.06
MDC1-205ENST00000425072 PARP12Q9H0J9 701 aaKnown RBP8.43□□□□□ -1.06
MDC1-205ENST00000425072 SIRPDQ9H106 197 aa8.43□□□□□ -1.06
MDC1-205ENST00000425072 C7orf69Q9H7B7 122 aa8.43□□□□□ -1.06
MDC1-205ENST00000425072 LIN7CQ9NUP9 197 aaKnown RBP8.43□□□□□ -1.06
MDC1-205ENST00000425072 HIF1ANQ9NWT6 349 aa8.43□□□□□ -1.06
MDC1-205ENST00000425072 AUP1Q9Y679 476 aa8.43□□□□□ -1.06
MDC1-205ENST00000425072 PRRC2AP48634 2157 aaKnown RBP8.43□□□□□ -1.06
MDC1-205ENST00000425072 hCG_2014768A0A024R1R8 64 aa8.42□□□□□ -1.06
MDC1-205ENST00000425072 A0A096LNT2 108 aa8.42□□□□□ -1.06
MDC1-205ENST00000425072 A0A1B0GVG6 124 aa8.42□□□□□ -1.06
MDC1-205ENST00000425072 OOSP1A8MZH6 123 aa8.42□□□□□ -1.06
MDC1-205ENST00000425072 H0Y980 276 aa8.42□□□□□ -1.06
MDC1-205ENST00000425072 BUB1B-PAK6H3BSN5 160 aa8.42□□□□□ -1.06
MDC1-205ENST00000425072 M0R1X1 148 aa8.42□□□□□ -1.06
MDC1-205ENST00000425072 SLC31A2O15432 143 aa8.42□□□□□ -1.06
MDC1-205ENST00000425072 TXNL1O43396 289 aa8.42□□□□□ -1.06
MDC1-205ENST00000425072 CDS2O95674 445 aa8.42□□□□□ -1.06
MDC1-205ENST00000425072 TGFAP01135 160 aa8.42□□□□□ -1.06
MDC1-205ENST00000425072 ARG1P05089 322 aa8.42□□□□□ -1.06
MDC1-205ENST00000425072 TRAPPC2P0DI81 140 aa8.42□□□□□ -1.06
MDC1-205ENST00000425072 TRAPPC2BP0DI82 140 aa8.42□□□□□ -1.06
MDC1-205ENST00000425072 ZNF16P17020 682 aaPredicted RBP8.42□□□□□ -1.06
MDC1-205ENST00000425072 HLA-GP17693 338 aa8.42□□□□□ -1.06
MDC1-205ENST00000425072 MC5RP33032 325 aa8.42□□□□□ -1.06
MDC1-205ENST00000425072 ZNF137PP52743 207 aa8.42□□□□□ -1.06
MDC1-205ENST00000425072 BPIFB3P59826 476 aa8.42□□□□□ -1.06
MDC1-205ENST00000425072 RRAS2P62070 204 aaPredicted RBP8.42□□□□□ -1.06
MDC1-205ENST00000425072 SUPT4H1P63272 117 aaKnown RBP8.42□□□□□ -1.06
MDC1-205ENST00000425072 HLA-DRB5Q30154 266 aa8.42□□□□□ -1.06
MDC1-205ENST00000425072 LINC01559Q495D7 138 aa8.42□□□□□ -1.06
MDC1-205ENST00000425072 MINOS1Q5TGZ0 78 aa8.42□□□□□ -1.06
MDC1-205ENST00000425072 FAM53AQ6NSI3 398 aaPredicted RBP8.42□□□□□ -1.06
MDC1-205ENST00000425072 ZNF695Q8IW36 515 aa8.42□□□□□ -1.06
MDC1-205ENST00000425072 CADM3Q8N126 398 aa8.42□□□□□ -1.06
MDC1-205ENST00000425072 TEX29Q8N6K0 151 aa8.42□□□□□ -1.06
MDC1-205ENST00000425072 LRTM2Q8N967 370 aa8.42□□□□□ -1.06
MDC1-205ENST00000425072 CASTOR1Q8WTX7 329 aa8.42□□□□□ -1.06
MDC1-205ENST00000425072 GLYATL2Q8WU03 294 aa8.42□□□□□ -1.06
MDC1-205ENST00000425072 TMEM222Q9H0R3 208 aa8.42□□□□□ -1.06
MDC1-205ENST00000425072 IFI27L2Q9H2X8 130 aa8.42□□□□□ -1.06
MDC1-205ENST00000425072 DPM3Q9P2X0 92 aa8.42□□□□□ -1.06
MDC1-205ENST00000425072 MINOS1-NBL1R4GNA1 71 aa8.42□□□□□ -1.06
MDC1-205ENST00000425072 HIVEP1P15822 2718 aa8.42□□□□□ -1.06
MDC1-205ENST00000425072 MAP1AP78559 2803 aaPredicted RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms