RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 PYHIN1Q6K0P9 492 aa13.72□□□□□ -0.21
GPC1-203ENST00000425056 RNF5Q99942 180 aa13.72□□□□□ -0.21
GPC1-203ENST00000425056 ALX4Q9H161 411 aaPredicted RBP13.72□□□□□ -0.21
GPC1-203ENST00000425056 C12orf4Q9NQ89 552 aa13.72□□□□□ -0.21
GPC1-203ENST00000425056 TPSG1Q9NRR2 321 aa13.72□□□□□ -0.21
GPC1-203ENST00000425056 SCN3BQ9NY72 215 aa13.72□□□□□ -0.21
GPC1-203ENST00000425056 OR1A1Q9P1Q5 309 aa13.72□□□□□ -0.21
GPC1-203ENST00000425056 HSF4Q9ULV5 492 aa13.72□□□□□ -0.21
GPC1-203ENST00000425056 LINC01619G3V211 115 aa13.71□□□□□ -0.21
GPC1-203ENST00000425056 H7C2Y5 167 aa13.71□□□□□ -0.21
GPC1-203ENST00000425056 FCN1O00602 326 aa13.71□□□□□ -0.21
GPC1-203ENST00000425056 LY86O95711 162 aa13.71□□□□□ -0.21
GPC1-203ENST00000425056 GSTP1P09211 210 aaKnown RBP13.71□□□□□ -0.21
GPC1-203ENST00000425056 ARSBP15848 533 aa13.71□□□□□ -0.21
GPC1-203ENST00000425056 P2RY14Q15391 338 aa13.71□□□□□ -0.21
GPC1-203ENST00000425056 DLX4Q92988 240 aaPredicted RBP13.71□□□□□ -0.21
GPC1-203ENST00000425056 PTX4Q96A99 478 aa13.71□□□□□ -0.21
GPC1-203ENST00000425056 C11orf54Q9H0W9 315 aaPredicted RBP13.71□□□□□ -0.21
GPC1-203ENST00000425056 PLGRKTQ9HBL7 147 aa13.71□□□□□ -0.21
GPC1-203ENST00000425056 GAB2Q9UQC2 676 aa13.71□□□□□ -0.21
GPC1-203ENST00000425056 SMAD5-AS1Q9Y6J3 95 aa13.71□□□□□ -0.21
GPC1-203ENST00000425056 A3GALT2U3KPV4 340 aa13.71□□□□□ -0.21
GPC1-203ENST00000425056 PROP1O75360 226 aa13.7□□□□□ -0.22
GPC1-203ENST00000425056 SPDEFO95238 335 aa13.7□□□□□ -0.22
GPC1-203ENST00000425056 CEACAM6P40199 344 aa13.7□□□□□ -0.22
GPC1-203ENST00000425056 SLURP1P55000 103 aa13.7□□□□□ -0.22
GPC1-203ENST00000425056 TMEM267Q0VDI3 215 aaPredicted RBP13.7□□□□□ -0.22
GPC1-203ENST00000425056 AKIRIN2Q53H80 203 aa13.7□□□□□ -0.22
GPC1-203ENST00000425056 TMEM91Q6ZNR0 172 aa13.7□□□□□ -0.22
GPC1-203ENST00000425056 ABHD5Q8WTS1 349 aa13.7□□□□□ -0.22
GPC1-203ENST00000425056 CASTOR1Q8WTX7 329 aa13.7□□□□□ -0.22
GPC1-203ENST00000425056 TMEM203Q969S6 136 aa13.7□□□□□ -0.22
GPC1-203ENST00000425056 ASCL2Q99929 193 aa13.7□□□□□ -0.22
GPC1-203ENST00000425056 Q9N2K0 584 aa13.7□□□□□ -0.22
GPC1-203ENST00000425056 RNF150Q9ULK6 438 aa13.7□□□□□ -0.22
GPC1-203ENST00000425056 RAB26Q9ULW5 256 aa13.7□□□□□ -0.22
GPC1-203ENST00000425056 IGHV4OR15-8A0A075B7B6 117 aa13.69□□□□□ -0.22
GPC1-203ENST00000425056 A0A087WW49 117 aa13.69□□□□□ -0.22
GPC1-203ENST00000425056 HSPA12AO43301 675 aa13.69□□□□□ -0.22
GPC1-203ENST00000425056 SAP30O75446 220 aa13.69□□□□□ -0.22
GPC1-203ENST00000425056 ARL6IP5O75915 188 aa13.69□□□□□ -0.22
GPC1-203ENST00000425056 SCTP09683 121 aa13.69□□□□□ -0.22
GPC1-203ENST00000425056 TMEM50BP56557 158 aa13.69□□□□□ -0.22
GPC1-203ENST00000425056 RPS25P62851 125 aaKnown RBP13.69□□□□□ -0.22
GPC1-203ENST00000425056 TPBGQ13641 420 aa13.69□□□□□ -0.22
GPC1-203ENST00000425056 PSG5Q15238 335 aa13.69□□□□□ -0.22
GPC1-203ENST00000425056 RAB11BQ15907 218 aa13.69□□□□□ -0.22
GPC1-203ENST00000425056 ACTBL2Q562R1 376 aa13.69□□□□□ -0.22
GPC1-203ENST00000425056 ZNF562Q6V9R5 426 aa13.69□□□□□ -0.22
GPC1-203ENST00000425056 PPP1R27Q86WC6 154 aa13.69□□□□□ -0.22
GPC1-203ENST00000425056 FAM103A1Q9BTL3 118 aaKnown RBP13.69□□□□□ -0.22
GPC1-203ENST00000425056 Q9H521 79 aa13.69□□□□□ -0.22
GPC1-203ENST00000425056 METTL1Q9UBP6 276 aaKnown RBP13.69□□□□□ -0.22
GPC1-203ENST00000425056 HUWE1Q7Z6Z7 4374 aaKnown RBP13.68□□□□□ -0.22
GPC1-203ENST00000425056 CA2P00918 260 aa13.68□□□□□ -0.22
GPC1-203ENST00000425056 IGKV1-16P04430 117 aa13.68□□□□□ -0.22
GPC1-203ENST00000425056 CPEP16870 476 aa13.68□□□□□ -0.22
GPC1-203ENST00000425056 PSMA1P25786 263 aaKnown RBP13.68□□□□□ -0.22
GPC1-203ENST00000425056 TRAM1Q15629 374 aa13.68□□□□□ -0.22
GPC1-203ENST00000425056 ACSM6Q6P461 480 aa13.68□□□□□ -0.22
GPC1-203ENST00000425056 UNQ5815/PRO19632Q6UWF5 114 aa13.68□□□□□ -0.22
GPC1-203ENST00000425056 PDPNQ86YL7 162 aa13.68□□□□□ -0.22
GPC1-203ENST00000425056 ZNF383Q8NA42 475 aa13.68□□□□□ -0.22
GPC1-203ENST00000425056 DRAXINQ8NBI3 349 aaPredicted RBP13.68□□□□□ -0.22
GPC1-203ENST00000425056 ARHGAP5-AS1Q96IT6 56 aa13.68□□□□□ -0.22
GPC1-203ENST00000425056 TSNAXQ99598 290 aaKnown RBP13.68□□□□□ -0.22
GPC1-203ENST00000425056 PECRQ9BY49 303 aa13.68□□□□□ -0.22
GPC1-203ENST00000425056 DUSP21Q9H596 190 aa13.68□□□□□ -0.22
GPC1-203ENST00000425056 SLA2Q9H6Q3 261 aa13.68□□□□□ -0.22
GPC1-203ENST00000425056 AK6Q9Y3D8 172 aaKnown RBP13.68□□□□□ -0.22
GPC1-203ENST00000425056 IGKV1-6A0A0C4DH72 117 aa13.67□□□□□ -0.22
GPC1-203ENST00000425056 TFAP2AP05549 437 aa13.67□□□□□ -0.22
GPC1-203ENST00000425056 OR8U9P0C7N5 309 aa13.67□□□□□ -0.22
GPC1-203ENST00000425056 SPNP16150 400 aa13.67□□□□□ -0.22
GPC1-203ENST00000425056 VEGFCP49767 419 aa13.67□□□□□ -0.22
GPC1-203ENST00000425056 MLLT11Q13015 90 aaPredicted RBP13.67□□□□□ -0.22
GPC1-203ENST00000425056 LFNGQ8NES3 379 aa13.67□□□□□ -0.22
GPC1-203ENST00000425056 ARPC1AQ92747 370 aa13.67□□□□□ -0.22
GPC1-203ENST00000425056 CLCC1Q96S66 551 aa13.67□□□□□ -0.22
GPC1-203ENST00000425056 CMSS1Q9BQ75 279 aaKnown RBP13.67□□□□□ -0.22
GPC1-203ENST00000425056 ZNF221Q9UK13 617 aa13.67□□□□□ -0.22
GPC1-203ENST00000425056 TPRKBQ9Y3C4 175 aa13.67□□□□□ -0.22
GPC1-203ENST00000425056 LDLRAD4O15165 306 aa13.66□□□□□ -0.22
GPC1-203ENST00000425056 IGHV3-11P01762 117 aa13.66□□□□□ -0.22
GPC1-203ENST00000425056 APOA2P02652 100 aa13.66□□□□□ -0.22
GPC1-203ENST00000425056 HSPB1P04792 205 aaKnown RBP13.66□□□□□ -0.22
GPC1-203ENST00000425056 HSMCR30P0CW71 290 aa13.66□□□□□ -0.22
GPC1-203ENST00000425056 SNRPBP14678 240 aaKnown RBP13.66□□□□□ -0.22
GPC1-203ENST00000425056 CLDN12P56749 244 aa13.66□□□□□ -0.22
GPC1-203ENST00000425056 TPPP2P59282 170 aa13.66□□□□□ -0.22
GPC1-203ENST00000425056 PLAC9Q5JTB6 97 aa13.66□□□□□ -0.22
GPC1-203ENST00000425056 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.66□□□□□ -0.22
GPC1-203ENST00000425056 OR56B1Q8NGI3 324 aa13.66□□□□□ -0.22
GPC1-203ENST00000425056 OR6Q1Q8NGQ2 317 aa13.66□□□□□ -0.22
GPC1-203ENST00000425056 FAM3DQ96BQ1 224 aa13.66□□□□□ -0.22
GPC1-203ENST00000425056 FLYWCH2Q96CP2 140 aaKnown RBP13.66□□□□□ -0.22
GPC1-203ENST00000425056 RDH8Q9NYR8 311 aa13.66□□□□□ -0.22
GPC1-203ENST00000425056 TRDCB7Z8K6 153 aa13.65□□□□□ -0.22
GPC1-203ENST00000425056 C3orf84H3BNL1 204 aa13.65□□□□□ -0.22
GPC1-203ENST00000425056 ARPC1BO15143 372 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms