RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 ZNF665Q9H7R5 613 aa9.96□□□□□ -0.81
PTPRN-204ENST00000423636 RNF115Q9Y4L5 304 aa9.96□□□□□ -0.81
PTPRN-204ENST00000423636 ITPR1Q14643 2758 aa9.96□□□□□ -0.82
PTPRN-204ENST00000423636 TMEM30CPA0ZSE6 113 aa9.96□□□□□ -0.82
PTPRN-204ENST00000423636 SYNGR2O43760 224 aa9.96□□□□□ -0.82
PTPRN-204ENST00000423636 S100GP29377 79 aa9.96□□□□□ -0.82
PTPRN-204ENST00000423636 REG1BP48304 166 aa9.96□□□□□ -0.82
PTPRN-204ENST00000423636 KIAA0141Q14154 515 aaPredicted RBP9.96□□□□□ -0.82
PTPRN-204ENST00000423636 RND1Q92730 232 aa9.96□□□□□ -0.82
PTPRN-204ENST00000423636 MUCL1Q96DR8 90 aa9.96□□□□□ -0.82
PTPRN-204ENST00000423636 FAM122AQ96E09 287 aa9.96□□□□□ -0.82
PTPRN-204ENST00000423636 CXXC4Q9H2H0 198 aa9.96□□□□□ -0.82
PTPRN-204ENST00000423636 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.95□□□□□ -0.82
PTPRN-204ENST00000423636 MMP23AO75900 390 aa9.95□□□□□ -0.82
PTPRN-204ENST00000423636 H2AFB1P0C5Y9 115 aa9.95□□□□□ -0.82
PTPRN-204ENST00000423636 GCSAMLQ5JQS6 135 aa9.95□□□□□ -0.82
PTPRN-204ENST00000423636 AKR1C8PQ5T2L2 129 aa9.95□□□□□ -0.82
PTPRN-204ENST00000423636 GCSAMQ8N6F7 178 aa9.95□□□□□ -0.82
PTPRN-204ENST00000423636 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.95□□□□□ -0.82
PTPRN-204ENST00000423636 CLEC18AA5D8T8 446 aa9.95□□□□□ -0.82
PTPRN-204ENST00000423636 H7C2Y5 167 aa9.95□□□□□ -0.82
PTPRN-204ENST00000423636 SNAPC5O75971 98 aa9.95□□□□□ -0.82
PTPRN-204ENST00000423636 PRB4P10163 310 aaPredicted RBP9.95□□□□□ -0.82
PTPRN-204ENST00000423636 PAX6P26367 422 aa9.95□□□□□ -0.82
PTPRN-204ENST00000423636 EIF5AP63241 154 aaKnown RBP9.95□□□□□ -0.82
PTPRN-204ENST00000423636 ZNF146Q15072 292 aa9.95□□□□□ -0.82
PTPRN-204ENST00000423636 ZNF674Q2M3X9 581 aa9.95□□□□□ -0.82
PTPRN-204ENST00000423636 CLEC18CQ8NCF0 446 aa9.95□□□□□ -0.82
PTPRN-204ENST00000423636 OR5D13Q8NGL4 314 aa9.95□□□□□ -0.82
PTPRN-204ENST00000423636 SCNM1Q9BWG6 230 aa9.95□□□□□ -0.82
PTPRN-204ENST00000423636 PLSCR4Q9NRQ2 329 aa9.95□□□□□ -0.82
PTPRN-204ENST00000423636 RPRMQ9NS64 109 aa9.95□□□□□ -0.82
PTPRN-204ENST00000423636 SLC25A15Q9Y619 301 aa9.95□□□□□ -0.82
PTPRN-204ENST00000423636 CELSR2Q9HCU4 2923 aa9.95□□□□□ -0.82
PTPRN-204ENST00000423636 CEBPZOSA8MTT3 80 aa9.95□□□□□ -0.82
PTPRN-204ENST00000423636 LYNX1G3V0Z9 82 aa9.95□□□□□ -0.82
PTPRN-204ENST00000423636 M0R1X1 148 aa9.95□□□□□ -0.82
PTPRN-204ENST00000423636 LYNX1P0DP58 116 aa9.95□□□□□ -0.82
PTPRN-204ENST00000423636 STX12Q86Y82 276 aa9.95□□□□□ -0.82
PTPRN-204ENST00000423636 CYB561D1Q8N8Q1 229 aa9.95□□□□□ -0.82
PTPRN-204ENST00000423636 OR4C12Q96R67 309 aa9.95□□□□□ -0.82
PTPRN-204ENST00000423636 SPIN2AQ99865 258 aa9.95□□□□□ -0.82
PTPRN-204ENST00000423636 SPIN2BQ9BPZ2 258 aa9.95□□□□□ -0.82
PTPRN-204ENST00000423636 RBKSQ9H477 322 aa9.95□□□□□ -0.82
PTPRN-204ENST00000423636 SLC25A22Q9H936 323 aa9.95□□□□□ -0.82
PTPRN-204ENST00000423636 PARP11Q9NR21 331 aa9.95□□□□□ -0.82
PTPRN-204ENST00000423636 HIVEP3Q5T1R4 2406 aa9.94□□□□□ -0.82
PTPRN-204ENST00000423636 ODAMA1E959 279 aa9.94□□□□□ -0.82
PTPRN-204ENST00000423636 C7orf77A4D0Y5 90 aa9.94□□□□□ -0.82
PTPRN-204ENST00000423636 PROP1O75360 226 aa9.94□□□□□ -0.82
PTPRN-204ENST00000423636 CGAP01215 116 aa9.94□□□□□ -0.82
PTPRN-204ENST00000423636 IFNA17P01571 189 aa9.94□□□□□ -0.82
PTPRN-204ENST00000423636 IGHV3-48P01763 117 aa9.94□□□□□ -0.82
PTPRN-204ENST00000423636 APELAP0DMC3 54 aa9.94□□□□□ -0.82
PTPRN-204ENST00000423636 DVL1P1P54792 670 aaPredicted RBP9.94□□□□□ -0.82
PTPRN-204ENST00000423636 RND3P61587 244 aa9.94□□□□□ -0.82
PTPRN-204ENST00000423636 GINS3Q9BRX5 216 aa9.94□□□□□ -0.82
PTPRN-204ENST00000423636 WIPI2Q9Y4P8 454 aa9.94□□□□□ -0.82
PTPRN-204ENST00000423636 FAM90A10PA6NDY2 464 aa9.94□□□□□ -0.82
PTPRN-204ENST00000423636 FAM90A18PA6NE21 464 aa9.94□□□□□ -0.82
PTPRN-204ENST00000423636 FAM90A16PA6NEW6 464 aa9.94□□□□□ -0.82
PTPRN-204ENST00000423636 FAM90A20PA6NIJ5 464 aa9.94□□□□□ -0.82
PTPRN-204ENST00000423636 FAM90A8PA6NJQ4 464 aa9.94□□□□□ -0.82
PTPRN-204ENST00000423636 FAM90A7PA6NKC0 464 aa9.94□□□□□ -0.82
PTPRN-204ENST00000423636 FAM90A22PA8MWA6 464 aa9.94□□□□□ -0.82
PTPRN-204ENST00000423636 FAM90A12PA8MX19 464 aa9.94□□□□□ -0.82
PTPRN-204ENST00000423636 FAM90A5PA8MXJ8 464 aa9.94□□□□□ -0.82
PTPRN-204ENST00000423636 FAM90A23PA8MXZ1 464 aa9.94□□□□□ -0.82
PTPRN-204ENST00000423636 SNAPINO95295 136 aa9.94□□□□□ -0.82
PTPRN-204ENST00000423636 CTXN2P0C2S0 81 aa9.94□□□□□ -0.82
PTPRN-204ENST00000423636 FAM90A15PP0C7V4 464 aa9.94□□□□□ -0.82
PTPRN-204ENST00000423636 FAM90A13PP0C7W8 464 aa9.94□□□□□ -0.82
PTPRN-204ENST00000423636 FAM90A14PP0C7W9 464 aa9.94□□□□□ -0.82
PTPRN-204ENST00000423636 FAM90A24PP0C7X0 464 aa9.94□□□□□ -0.82
PTPRN-204ENST00000423636 PIEZO1Q92508 2521 aa9.94□□□□□ -0.82
PTPRN-204ENST00000423636 DYSFO75923 2080 aa9.94□□□□□ -0.82
PTPRN-204ENST00000423636 CLDN14O95500 239 aa9.94□□□□□ -0.82
PTPRN-204ENST00000423636 CD5P06127 495 aa9.94□□□□□ -0.82
PTPRN-204ENST00000423636 NDUFB7P17568 137 aa9.94□□□□□ -0.82
PTPRN-204ENST00000423636 COX5AP20674 150 aa9.94□□□□□ -0.82
PTPRN-204ENST00000423636 TFF3Q07654 80 aa9.94□□□□□ -0.82
PTPRN-204ENST00000423636 IL34Q6ZMJ4 242 aa9.94□□□□□ -0.82
PTPRN-204ENST00000423636 CCL17Q92583 94 aa9.94□□□□□ -0.82
PTPRN-204ENST00000423636 SAT2Q96F10 170 aaPredicted RBP9.94□□□□□ -0.82
PTPRN-204ENST00000423636 TMPRSS2O15393 492 aa9.93□□□□□ -0.82
PTPRN-204ENST00000423636 GAPDHP04406 335 aaKnown RBP9.93□□□□□ -0.82
PTPRN-204ENST00000423636 UBE2KP61086 200 aa9.93□□□□□ -0.82
PTPRN-204ENST00000423636 RAB11AP62491 216 aa9.93□□□□□ -0.82
PTPRN-204ENST00000423636 RPL23AP62750 156 aaKnown RBP9.93□□□□□ -0.82
PTPRN-204ENST00000423636 GUSBP1Q15486 140 aa9.93□□□□□ -0.82
PTPRN-204ENST00000423636 QTRT1Q9BXR0 403 aaKnown RBP9.93□□□□□ -0.82
PTPRN-204ENST00000423636 TET2Q6N021 2002 aaPredicted RBP9.93□□□□□ -0.82
PTPRN-204ENST00000423636 K7N7A8 449 aa9.93□□□□□ -0.82
PTPRN-204ENST00000423636 LY6HO94772 140 aa9.93□□□□□ -0.82
PTPRN-204ENST00000423636 RAB2AP61019 212 aa9.93□□□□□ -0.82
PTPRN-204ENST00000423636 SMIM21Q3B7S5 101 aa9.93□□□□□ -0.82
PTPRN-204ENST00000423636 FAM185AQ8N0U4 392 aa9.93□□□□□ -0.82
PTPRN-204ENST00000423636 SCGB1C1Q8TD33 95 aa9.93□□□□□ -0.82
PTPRN-204ENST00000423636 SEC11CQ9BY50 192 aa9.93□□□□□ -0.82
PTPRN-204ENST00000423636 SLC25A31Q9H0C2 315 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms