RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 SSX3Q99909 188 aa13.68□□□□□ -0.22
COL7A1-202ENST00000422991 MRPL20Q9BYC9 149 aaKnown RBP13.68□□□□□ -0.22
COL7A1-202ENST00000422991 FXYD6Q9H0Q3 95 aa13.68□□□□□ -0.22
COL7A1-202ENST00000422991 ESM1Q9NQ30 184 aa13.68□□□□□ -0.22
COL7A1-202ENST00000422991 GAB2Q9UQC2 676 aa13.68□□□□□ -0.22
COL7A1-202ENST00000422991 A0A0A6YYJ9 748 aa13.67□□□□□ -0.22
COL7A1-202ENST00000422991 H3BUX3 64 aa13.67□□□□□ -0.22
COL7A1-202ENST00000422991 PROP1O75360 226 aa13.67□□□□□ -0.22
COL7A1-202ENST00000422991 IFNA6P05013 189 aa13.67□□□□□ -0.22
COL7A1-202ENST00000422991 FXYD4P59646 89 aa13.67□□□□□ -0.22
COL7A1-202ENST00000422991 AP3S2P59780 193 aa13.67□□□□□ -0.22
COL7A1-202ENST00000422991 TSPAN5P62079 268 aa13.67□□□□□ -0.22
COL7A1-202ENST00000422991 HABP2Q14520 560 aaPredicted RBP13.67□□□□□ -0.22
COL7A1-202ENST00000422991 TRIQKQ629K1 86 aa13.67□□□□□ -0.22
COL7A1-202ENST00000422991 FAAP20Q6NZ36 180 aa13.67□□□□□ -0.22
COL7A1-202ENST00000422991 TMEM17Q86X19 198 aa13.67□□□□□ -0.22
COL7A1-202ENST00000422991 TOMM5Q8N4H5 51 aa13.67□□□□□ -0.22
COL7A1-202ENST00000422991 TMEM86BQ8N661 226 aa13.67□□□□□ -0.22
COL7A1-202ENST00000422991 DRAM1Q8N682 238 aa13.67□□□□□ -0.22
COL7A1-202ENST00000422991 ZNF645Q8N7E2 425 aa13.67□□□□□ -0.22
COL7A1-202ENST00000422991 PIFOQ8TCI5 191 aa13.67□□□□□ -0.22
COL7A1-202ENST00000422991 MDFIQ99750 246 aa13.67□□□□□ -0.22
COL7A1-202ENST00000422991 WDR12Q9GZL7 423 aaKnown RBP13.67□□□□□ -0.22
COL7A1-202ENST00000422991 DPAGT1Q9H3H5 408 aa13.67□□□□□ -0.22
COL7A1-202ENST00000422991 SDHAF2Q9NX18 166 aa13.67□□□□□ -0.22
COL7A1-202ENST00000422991 POMT1Q9Y6A1 747 aa13.67□□□□□ -0.22
COL7A1-202ENST00000422991 TCF21O43680 179 aa13.66□□□□□ -0.22
COL7A1-202ENST00000422991 SLC22A5O76082 557 aa13.66□□□□□ -0.22
COL7A1-202ENST00000422991 IGLV2-14P01704 120 aa13.66□□□□□ -0.22
COL7A1-202ENST00000422991 AMY2AP04746 511 aa13.66□□□□□ -0.22
COL7A1-202ENST00000422991 ZNF735P0CB33 412 aa13.66□□□□□ -0.22
COL7A1-202ENST00000422991 IL7P13232 177 aa13.66□□□□□ -0.22
COL7A1-202ENST00000422991 PPP5CP53041 499 aa13.66□□□□□ -0.22
COL7A1-202ENST00000422991 ZNF846Q147U1 533 aa13.66□□□□□ -0.22
COL7A1-202ENST00000422991 SLC9A3R2Q15599 337 aa13.66□□□□□ -0.22
COL7A1-202ENST00000422991 MOB3BQ86TA1 216 aa13.66□□□□□ -0.22
COL7A1-202ENST00000422991 LHFPL1Q86WI0 220 aa13.66□□□□□ -0.22
COL7A1-202ENST00000422991 ZDHHC22Q8N966 263 aa13.66□□□□□ -0.22
COL7A1-202ENST00000422991 OR56B4Q8NH76 319 aa13.66□□□□□ -0.22
COL7A1-202ENST00000422991 OR5R1Q8NH85 324 aa13.66□□□□□ -0.22
COL7A1-202ENST00000422991 SECTM1Q8WVN6 248 aa13.66□□□□□ -0.22
COL7A1-202ENST00000422991 JMJD8Q96S16 334 aa13.66□□□□□ -0.22
COL7A1-202ENST00000422991 NABP2Q9BQ15 211 aa13.66□□□□□ -0.22
COL7A1-202ENST00000422991 CCDC32Q9BV29 185 aa13.66□□□□□ -0.22
COL7A1-202ENST00000422991 SLC5A7Q9GZV3 580 aa13.66□□□□□ -0.22
COL7A1-202ENST00000422991 ABCB10Q9NRK6 738 aa13.66□□□□□ -0.22
COL7A1-202ENST00000422991 COL6A5A8TX70 2615 aa13.66□□□□□ -0.22
COL7A1-202ENST00000422991 OR5H14A6NHG9 310 aa13.65□□□□□ -0.22
COL7A1-202ENST00000422991 FAM90A9PA6NNJ1 464 aa13.65□□□□□ -0.22
COL7A1-202ENST00000422991 CLDN34H7C241 214 aa13.65□□□□□ -0.22
COL7A1-202ENST00000422991 M0R1X1 148 aa13.65□□□□□ -0.22
COL7A1-202ENST00000422991 CD40LGP29965 261 aa13.65□□□□□ -0.22
COL7A1-202ENST00000422991 BRS3P32247 399 aa13.65□□□□□ -0.22
COL7A1-202ENST00000422991 RAB13P51153 203 aa13.65□□□□□ -0.22
COL7A1-202ENST00000422991 LSAMPQ13449 338 aa13.65□□□□□ -0.22
COL7A1-202ENST00000422991 MSMO1Q15800 293 aa13.65□□□□□ -0.22
COL7A1-202ENST00000422991 AADACL3Q5VUY0 350 aa13.65□□□□□ -0.22
COL7A1-202ENST00000422991 DEDD2Q8WXF8 326 aa13.65□□□□□ -0.22
COL7A1-202ENST00000422991 DUX5Q96PT3 197 aa13.65□□□□□ -0.22
COL7A1-202ENST00000422991 VPREB3Q9UKI3 123 aa13.65□□□□□ -0.22
COL7A1-202ENST00000422991 IGHV3-72A0A0B4J1Y9 119 aa13.64□□□□□ -0.23
COL7A1-202ENST00000422991 BTBD17A6NE02 478 aa13.64□□□□□ -0.23
COL7A1-202ENST00000422991 DISC1C4P0D8 188 aa13.64□□□□□ -0.23
COL7A1-202ENST00000422991 VENTXO95231 258 aa13.64□□□□□ -0.23
COL7A1-202ENST00000422991 CT45A6P0DMU7 189 aa13.64□□□□□ -0.23
COL7A1-202ENST00000422991 CT45A5P0DMU8 189 aa13.64□□□□□ -0.23
COL7A1-202ENST00000422991 CT45A7P0DMV0 189 aa13.64□□□□□ -0.23
COL7A1-202ENST00000422991 FAUP35544 74 aaKnown RBP13.64□□□□□ -0.23
COL7A1-202ENST00000422991 ZNF57Q68EA5 555 aaPredicted RBP13.64□□□□□ -0.23
COL7A1-202ENST00000422991 HRASLSQ9HDD0 168 aa13.64□□□□□ -0.23
COL7A1-202ENST00000422991 CCL28Q9NRJ3 127 aa13.64□□□□□ -0.23
COL7A1-202ENST00000422991 SLC2A8Q9NY64 477 aa13.64□□□□□ -0.23
COL7A1-202ENST00000422991 TCF19Q9Y242 345 aa13.64□□□□□ -0.23
COL7A1-202ENST00000422991 SNRNP70P08621 437 aaKnown RBP13.63□□□□□ -0.23
COL7A1-202ENST00000422991 CD24P25063 80 aa13.63□□□□□ -0.23
COL7A1-202ENST00000422991 CD1BP29016 333 aa13.63□□□□□ -0.23
COL7A1-202ENST00000422991 INPP1P49441 399 aa13.63□□□□□ -0.23
COL7A1-202ENST00000422991 UCP3P55916 312 aa13.63□□□□□ -0.23
COL7A1-202ENST00000422991 UBA52P62987 128 aaKnown RBP13.63□□□□□ -0.23
COL7A1-202ENST00000422991 EIF4EBP1Q13541 118 aaPredicted RBP13.63□□□□□ -0.23
COL7A1-202ENST00000422991 SCGB2B2Q4G0G5 96 aa13.63□□□□□ -0.23
COL7A1-202ENST00000422991 FBLN7Q53RD9 439 aa13.63□□□□□ -0.23
COL7A1-202ENST00000422991 GLDNQ6ZMI3 551 aaPredicted RBP13.63□□□□□ -0.23
COL7A1-202ENST00000422991 ZNF818PQ6ZRF7 136 aa13.63□□□□□ -0.23
COL7A1-202ENST00000422991 THNSL2Q86YJ6 484 aa13.63□□□□□ -0.23
COL7A1-202ENST00000422991 DRAXINQ8NBI3 349 aaPredicted RBP13.63□□□□□ -0.23
COL7A1-202ENST00000422991 OR51S1Q8NGJ8 323 aa13.63□□□□□ -0.23
COL7A1-202ENST00000422991 CAPSLQ8WWF8 208 aa13.63□□□□□ -0.23
COL7A1-202ENST00000422991 MRGPRFQ96AM1 343 aa13.63□□□□□ -0.23
COL7A1-202ENST00000422991 PRRT1Q99946 306 aa13.63□□□□□ -0.23
COL7A1-202ENST00000422991 CHIAQ9BZP6 476 aa13.63□□□□□ -0.23
COL7A1-202ENST00000422991 TNFRSF19Q9NS68 423 aa13.63□□□□□ -0.23
COL7A1-202ENST00000422991 DNHD1Q96M86 4753 aa13.62□□□□□ -0.23
COL7A1-202ENST00000422991 A6NDX4 124 aa13.62□□□□□ -0.23
COL7A1-202ENST00000422991 H0YJW9 148 aa13.62□□□□□ -0.23
COL7A1-202ENST00000422991 RNASE1P07998 156 aaKnown RBP13.62□□□□□ -0.23
COL7A1-202ENST00000422991 GNRHRP30968 328 aa13.62□□□□□ -0.23
COL7A1-202ENST00000422991 DUTP33316 252 aaKnown RBP13.62□□□□□ -0.23
COL7A1-202ENST00000422991 THBS3P49746 956 aa13.62□□□□□ -0.23
COL7A1-202ENST00000422991 LINC00205P59089 165 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms