RNA–Protein interactions for RNA: ENST00000422797.5

LIMS1-207, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene LIMS1, Length 1,544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-207ENST00000422797 MEGF10Q96KG7 1140 aa9.3□□□□□ -0.92
LIMS1-207ENST00000422797 LURAP1Q96LR2 239 aa9.3□□□□□ -0.92
LIMS1-207ENST00000422797 CDX2Q99626 313 aaPredicted RBP9.3□□□□□ -0.92
LIMS1-207ENST00000422797 TMEM204Q9BSN7 226 aa9.3□□□□□ -0.92
LIMS1-207ENST00000422797 DEPPQ9NTK1 212 aa9.3□□□□□ -0.92
LIMS1-207ENST00000422797 CRIM1Q9NZV1 1036 aa9.3□□□□□ -0.92
LIMS1-207ENST00000422797 WASF3Q9UPY6 502 aa9.3□□□□□ -0.92
LIMS1-207ENST00000422797 C5orf42Q9H799 3197 aa9.29□□□□□ -0.92
LIMS1-207ENST00000422797 GON4LQ3T8J9 2241 aa9.29□□□□□ -0.92
LIMS1-207ENST00000422797 TMEM265A0A087WTH1 108 aa9.29□□□□□ -0.92
LIMS1-207ENST00000422797 OOEPA6NGQ2 149 aa9.29□□□□□ -0.92
LIMS1-207ENST00000422797 MLNRO43193 412 aa9.29□□□□□ -0.92
LIMS1-207ENST00000422797 MDKP21741 143 aaPredicted RBP9.29□□□□□ -0.92
LIMS1-207ENST00000422797 MPLP40238 635 aa9.29□□□□□ -0.92
LIMS1-207ENST00000422797 CDC34P49427 236 aaPredicted RBP9.29□□□□□ -0.92
LIMS1-207ENST00000422797 CNN1P51911 297 aaKnown RBP9.29□□□□□ -0.92
LIMS1-207ENST00000422797 Q0VFX4 171 aa9.29□□□□□ -0.92
LIMS1-207ENST00000422797 FOXL1Q12952 345 aa9.29□□□□□ -0.92
LIMS1-207ENST00000422797 SLC35E4Q6ICL7 350 aa9.29□□□□□ -0.92
LIMS1-207ENST00000422797 ACSM6Q6P461 480 aa9.29□□□□□ -0.92
LIMS1-207ENST00000422797 TUSC5Q8IXB3 177 aa9.29□□□□□ -0.92
LIMS1-207ENST00000422797 NINJ1Q92982 152 aa9.29□□□□□ -0.92
LIMS1-207ENST00000422797 GALMQ96C23 342 aa9.29□□□□□ -0.92
LIMS1-207ENST00000422797 NPCDR1Q9BY65 106 aa9.29□□□□□ -0.92
LIMS1-207ENST00000422797 SLC25A22Q9H936 323 aa9.29□□□□□ -0.92
LIMS1-207ENST00000422797 LAMA2P24043 3122 aaKnown RBP9.29□□□□□ -0.92
LIMS1-207ENST00000422797 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.28□□□□□ -0.92
LIMS1-207ENST00000422797 A0A1W2PPQ1 181 aa9.28□□□□□ -0.92
LIMS1-207ENST00000422797 C11orf94C9JXX5 98 aa9.28□□□□□ -0.92
LIMS1-207ENST00000422797 NXPH2O95156 264 aa9.28□□□□□ -0.92
LIMS1-207ENST00000422797 NGFP01138 241 aa9.28□□□□□ -0.92
LIMS1-207ENST00000422797 IGKV1D-33P01593 117 aa9.28□□□□□ -0.92
LIMS1-207ENST00000422797 IGKV1-33P01594 117 aa9.28□□□□□ -0.92
LIMS1-207ENST00000422797 IGHV3-9P01782 118 aa9.28□□□□□ -0.92
LIMS1-207ENST00000422797 WNT5AP41221 380 aa9.28□□□□□ -0.92
LIMS1-207ENST00000422797 ERVS71-1P61550 626 aa9.28□□□□□ -0.92
LIMS1-207ENST00000422797 EIF4EBP1Q13541 118 aaPredicted RBP9.28□□□□□ -0.92
LIMS1-207ENST00000422797 AARDQ4LEZ3 155 aa9.28□□□□□ -0.92
LIMS1-207ENST00000422797 ABHD17BQ5VST6 288 aa9.28□□□□□ -0.92
LIMS1-207ENST00000422797 ABCA7Q8IZY2 2146 aa9.28□□□□□ -0.92
LIMS1-207ENST00000422797 GBGT1Q8N5D6 347 aa9.28□□□□□ -0.92
LIMS1-207ENST00000422797 OR1K1Q8NGR3 316 aa9.28□□□□□ -0.92
LIMS1-207ENST00000422797 ZNF488Q96MN9 340 aa9.28□□□□□ -0.92
LIMS1-207ENST00000422797 HSD17B10Q99714 261 aaKnown RBP9.28□□□□□ -0.92
LIMS1-207ENST00000422797 PCGF1Q9BSM1 259 aa9.28□□□□□ -0.92
LIMS1-207ENST00000422797 DDA1Q9BW61 102 aa9.28□□□□□ -0.92
LIMS1-207ENST00000422797 PRO1933Q9H354 126 aa9.28□□□□□ -0.92
LIMS1-207ENST00000422797 TUBG2Q9NRH3 451 aa9.28□□□□□ -0.92
LIMS1-207ENST00000422797 A0A1B0GV90 55 aa9.27□□□□□ -0.93
LIMS1-207ENST00000422797 ODAMA1E959 279 aa9.27□□□□□ -0.93
LIMS1-207ENST00000422797 PMS2P5A8MQ11 134 aa9.27□□□□□ -0.93
LIMS1-207ENST00000422797 M0QZK8 103 aa9.27□□□□□ -0.93
LIMS1-207ENST00000422797 SIRPB1O00241 398 aa9.27□□□□□ -0.93
LIMS1-207ENST00000422797 CA6P23280 308 aa9.27□□□□□ -0.93
LIMS1-207ENST00000422797 UBE2NP61088 152 aaKnown RBP9.27□□□□□ -0.93
LIMS1-207ENST00000422797 RPL19P84098 196 aaKnown RBP9.27□□□□□ -0.93
LIMS1-207ENST00000422797 IZUMO4Q1ZYL8 232 aa9.27□□□□□ -0.93
LIMS1-207ENST00000422797 CDCP2Q5VXM1 449 aa9.27□□□□□ -0.93
LIMS1-207ENST00000422797 FAM180AQ6UWF9 173 aa9.27□□□□□ -0.93
LIMS1-207ENST00000422797 BTNL3Q6UXE8 466 aa9.27□□□□□ -0.93
LIMS1-207ENST00000422797 BEND4Q6ZU67 534 aa9.27□□□□□ -0.93
LIMS1-207ENST00000422797 H2BFWTQ7Z2G1 175 aa9.27□□□□□ -0.93
LIMS1-207ENST00000422797 TMEM144Q7Z5S9 345 aa9.27□□□□□ -0.93
LIMS1-207ENST00000422797 C5orf24Q7Z6I8 188 aa9.27□□□□□ -0.93
LIMS1-207ENST00000422797 MRPL41Q8IXM3 137 aaKnown RBP9.27□□□□□ -0.93
LIMS1-207ENST00000422797 PRR7Q8TB68 274 aa9.27□□□□□ -0.93
LIMS1-207ENST00000422797 SIT1Q9Y3P8 196 aa9.27□□□□□ -0.93
LIMS1-207ENST00000422797 ASCC3Q8N3C0 2202 aaKnown RBP9.27□□□□□ -0.93
LIMS1-207ENST00000422797 A0A1W2PR80 420 aa9.26□□□□□ -0.93
LIMS1-207ENST00000422797 PINLYPA6NC86 204 aa9.26□□□□□ -0.93
LIMS1-207ENST00000422797 ATXN7O15265 892 aaPredicted RBP9.26□□□□□ -0.93
LIMS1-207ENST00000422797 PAGE4O60829 102 aa9.26□□□□□ -0.93
LIMS1-207ENST00000422797 PDGFBP01127 241 aaPredicted RBP9.26□□□□□ -0.93
LIMS1-207ENST00000422797 CFIP05156 583 aa9.26□□□□□ -0.93
LIMS1-207ENST00000422797 CCL2P13500 99 aa9.26□□□□□ -0.93
LIMS1-207ENST00000422797 OR1C1Q15619 314 aa9.26□□□□□ -0.93
LIMS1-207ENST00000422797 SLC23A3Q6PIS1 610 aa9.26□□□□□ -0.93
LIMS1-207ENST00000422797 ZNF664Q8N3J9 261 aa9.26□□□□□ -0.93
LIMS1-207ENST00000422797 C17orf78Q8N4C9 275 aa9.26□□□□□ -0.93
LIMS1-207ENST00000422797 SCCPDHQ8NBX0 429 aa9.26□□□□□ -0.93
LIMS1-207ENST00000422797 NECAP1Q8NC96 275 aa9.26□□□□□ -0.93
LIMS1-207ENST00000422797 CT55Q8WUE5 264 aa9.26□□□□□ -0.93
LIMS1-207ENST00000422797 BCL2L2Q92843 193 aaPredicted RBP9.26□□□□□ -0.93
LIMS1-207ENST00000422797 HES4Q9HCC6 221 aa9.26□□□□□ -0.93
LIMS1-207ENST00000422797 FUT9Q9Y231 359 aa9.26□□□□□ -0.93
LIMS1-207ENST00000422797 WDR83OSQ9Y284 106 aa9.26□□□□□ -0.93
LIMS1-207ENST00000422797 LY96Q9Y6Y9 160 aa9.26□□□□□ -0.93
LIMS1-207ENST00000422797 ARL2-SNX15V9GYD0 113 aa9.26□□□□□ -0.93
LIMS1-207ENST00000422797 MYO9BQ13459 2157 aa9.26□□□□□ -0.93
LIMS1-207ENST00000422797 CACNA1EQ15878 2313 aa9.26□□□□□ -0.93
LIMS1-207ENST00000422797 MDFIC2A0A1B0GVS7 189 aa9.26□□□□□ -0.93
LIMS1-207ENST00000422797 ZNF705GA8MUZ8 300 aaPredicted RBP9.26□□□□□ -0.93
LIMS1-207ENST00000422797 IQCF6A8MYZ5 107 aa9.26□□□□□ -0.93
LIMS1-207ENST00000422797 RHBDL1O75783 438 aa9.26□□□□□ -0.93
LIMS1-207ENST00000422797 WISP2O76076 250 aa9.26□□□□□ -0.93
LIMS1-207ENST00000422797 TNFSF15O95150 251 aa9.26□□□□□ -0.93
LIMS1-207ENST00000422797 HAND1O96004 215 aa9.26□□□□□ -0.93
LIMS1-207ENST00000422797 MT-CO2P00403 227 aa9.26□□□□□ -0.93
LIMS1-207ENST00000422797 CD55P08174 381 aa9.26□□□□□ -0.93
LIMS1-207ENST00000422797 RAB4AP20338 218 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms