RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 ERASQ7Z444 233 aa10.67□□□□□ -0.7
CLCN4-203ENST00000421085 GLRX2Q9NS18 164 aa10.67□□□□□ -0.7
CLCN4-203ENST00000421085 PEF1Q9UBV8 284 aaKnown RBP10.67□□□□□ -0.7
CLCN4-203ENST00000421085 YBX2Q9Y2T7 364 aaKnown RBP10.67□□□□□ -0.7
CLCN4-203ENST00000421085 TRBV9A0A0B4J1U6 114 aa10.67□□□□□ -0.7
CLCN4-203ENST00000421085 IGHV1OR15-9A0A0B4J2B8 117 aa10.67□□□□□ -0.7
CLCN4-203ENST00000421085 LIFP15018 202 aa10.67□□□□□ -0.7
CLCN4-203ENST00000421085 ZNF708P17019 499 aa10.67□□□□□ -0.7
CLCN4-203ENST00000421085 NXPH1P58417 271 aa10.67□□□□□ -0.7
CLCN4-203ENST00000421085 PSG4Q00888 419 aa10.67□□□□□ -0.7
CLCN4-203ENST00000421085 TMEM187Q14656 261 aa10.67□□□□□ -0.7
CLCN4-203ENST00000421085 HERPUD1Q15011 391 aa10.67□□□□□ -0.7
CLCN4-203ENST00000421085 MTURNQ8N3F0 131 aa10.67□□□□□ -0.7
CLCN4-203ENST00000421085 BTAF1O14981 1849 aa10.67□□□□□ -0.7
CLCN4-203ENST00000421085 SOX8P57073 446 aa10.67□□□□□ -0.7
CLCN4-203ENST00000421085 MDP1Q86V88 176 aa10.67□□□□□ -0.7
CLCN4-203ENST00000421085 C14orf144Q96I85 54 aa10.67□□□□□ -0.7
CLCN4-203ENST00000421085 A0A1B0GV72 72 aa10.66□□□□□ -0.7
CLCN4-203ENST00000421085 PRDX2P32119 198 aa10.66□□□□□ -0.7
CLCN4-203ENST00000421085 FAM27BQ5VT28 67 aa10.66□□□□□ -0.7
CLCN4-203ENST00000421085 C7orf71A4D174 169 aa10.66□□□□□ -0.7
CLCN4-203ENST00000421085 ZNF729A6NN14 1252 aaPredicted RBP10.66□□□□□ -0.7
CLCN4-203ENST00000421085 ZNHIT1O43257 154 aa10.66□□□□□ -0.7
CLCN4-203ENST00000421085 FOXS1O43638 330 aa10.66□□□□□ -0.7
CLCN4-203ENST00000421085 OR10AG1Q8NH19 301 aa10.66□□□□□ -0.7
CLCN4-203ENST00000421085 SPSB4Q96A44 273 aa10.66□□□□□ -0.7
CLCN4-203ENST00000421085 LHX9Q9NQ69 397 aa10.66□□□□□ -0.7
CLCN4-203ENST00000421085 NUDT3O95989 172 aa10.66□□□□□ -0.7
CLCN4-203ENST00000421085 ARF6P62330 175 aa10.66□□□□□ -0.7
CLCN4-203ENST00000421085 BIVMQ86UB2 503 aa10.66□□□□□ -0.7
CLCN4-203ENST00000421085 PMCHL2Q9BQD1 86 aa10.66□□□□□ -0.7
CLCN4-203ENST00000421085 IGLV1-36A0A0B4J1U3 117 aa10.66□□□□□ -0.7
CLCN4-203ENST00000421085 NPIPB7O75200 414 aa10.66□□□□□ -0.7
CLCN4-203ENST00000421085 NGFRP08138 427 aa10.66□□□□□ -0.7
CLCN4-203ENST00000421085 ZG16O60844 167 aa10.66□□□□□ -0.7
CLCN4-203ENST00000421085 OR2H2O95918 312 aa10.66□□□□□ -0.7
CLCN4-203ENST00000421085 EGR1P18146 543 aa10.66□□□□□ -0.7
CLCN4-203ENST00000421085 TNFRSF9Q07011 255 aa10.66□□□□□ -0.7
CLCN4-203ENST00000421085 CT55Q8WUE5 264 aa10.66□□□□□ -0.7
CLCN4-203ENST00000421085 OR8B2Q96RD0 313 aa10.66□□□□□ -0.7
CLCN4-203ENST00000421085 SMIM13P0DJ93 91 aa10.65□□□□□ -0.7
CLCN4-203ENST00000421085 MAP1LC3AQ9H492 121 aa10.65□□□□□ -0.7
CLCN4-203ENST00000421085 DNAJC4Q9NNZ3 241 aa10.65□□□□□ -0.7
CLCN4-203ENST00000421085 SHISA3A0PJX4 238 aa10.65□□□□□ -0.7
CLCN4-203ENST00000421085 FAM90A27PA6NNH2 459 aa10.65□□□□□ -0.7
CLCN4-203ENST00000421085 LDLRAD4O15165 306 aa10.65□□□□□ -0.7
CLCN4-203ENST00000421085 C2orf83Q53S99 150 aa10.65□□□□□ -0.7
CLCN4-203ENST00000421085 KIF13BQ9NQT8 1826 aa10.65□□□□□ -0.7
CLCN4-203ENST00000421085 IGKV1-8A0A0C4DH67 115 aa10.65□□□□□ -0.7
CLCN4-203ENST00000421085 IZUMO4Q1ZYL8 232 aa10.65□□□□□ -0.7
CLCN4-203ENST00000421085 WFDC3Q8IUB2 231 aa10.65□□□□□ -0.7
CLCN4-203ENST00000421085 OR8G5Q8NG78 346 aa10.65□□□□□ -0.7
CLCN4-203ENST00000421085 SMOC1Q9H4F8 434 aa10.65□□□□□ -0.7
CLCN4-203ENST00000421085 SCN3AQ9NY46 2000 aa10.65□□□□□ -0.7
CLCN4-203ENST00000421085 MSGN1A6NI15 193 aa10.65□□□□□ -0.7
CLCN4-203ENST00000421085 C2orf68Q2NKX9 166 aa10.65□□□□□ -0.7
CLCN4-203ENST00000421085 RAB1CQ92928 201 aa10.65□□□□□ -0.7
CLCN4-203ENST00000421085 MIEN1Q9BRT3 115 aa10.65□□□□□ -0.7
CLCN4-203ENST00000421085 SCNM1Q9BWG6 230 aa10.65□□□□□ -0.7
CLCN4-203ENST00000421085 AUP1Q9Y679 476 aa10.65□□□□□ -0.7
CLCN4-203ENST00000421085 SPINT1O43278 529 aa10.65□□□□□ -0.71
CLCN4-203ENST00000421085 MMDQ15546 238 aa10.65□□□□□ -0.71
CLCN4-203ENST00000421085 FAM206AQ9NX38 181 aa10.65□□□□□ -0.71
CLCN4-203ENST00000421085 HOXA5P20719 270 aa10.64□□□□□ -0.71
CLCN4-203ENST00000421085 ASCL5Q7RTU5 278 aa10.64□□□□□ -0.71
CLCN4-203ENST00000421085 EAF1Q96JC9 268 aaPredicted RBP10.64□□□□□ -0.71
CLCN4-203ENST00000421085 TMEM70Q9BUB7 260 aa10.64□□□□□ -0.71
CLCN4-203ENST00000421085 TNFRSF19Q9NS68 423 aa10.64□□□□□ -0.71
CLCN4-203ENST00000421085 K7N7A8 449 aa10.64□□□□□ -0.71
CLCN4-203ENST00000421085 RTP5Q14D33 572 aa10.64□□□□□ -0.71
CLCN4-203ENST00000421085 AMMECR1LQ6DCA0 310 aa10.64□□□□□ -0.71
CLCN4-203ENST00000421085 ZNF818PQ6ZRF7 136 aa10.64□□□□□ -0.71
CLCN4-203ENST00000421085 KCNK17Q96T54 332 aa10.64□□□□□ -0.71
CLCN4-203ENST00000421085 RAB1BQ9H0U4 201 aa10.64□□□□□ -0.71
CLCN4-203ENST00000421085 RABAC1Q9UI14 185 aa10.64□□□□□ -0.71
CLCN4-203ENST00000421085 F2RL2O00254 374 aa10.64□□□□□ -0.71
CLCN4-203ENST00000421085 ZIC3O60481 467 aa10.64□□□□□ -0.71
CLCN4-203ENST00000421085 SRSF12Q8WXF0 261 aaKnown RBP10.64□□□□□ -0.71
CLCN4-203ENST00000421085 ZCCHC14Q8WYQ9 949 aaKnown RBP10.64□□□□□ -0.71
CLCN4-203ENST00000421085 SGK494Q96LW2 274 aa10.64□□□□□ -0.71
CLCN4-203ENST00000421085 SSBP3Q9BWW4 388 aaPredicted RBP10.64□□□□□ -0.71
CLCN4-203ENST00000421085 C1RLQ9NZP8 487 aa10.64□□□□□ -0.71
CLCN4-203ENST00000421085 TNRC6CQ9HCJ0 1690 aaKnown RBP10.64□□□□□ -0.71
CLCN4-203ENST00000421085 FAM90A26D6RGX4 464 aa10.64□□□□□ -0.71
CLCN4-203ENST00000421085 TSPAN2O60636 221 aa10.64□□□□□ -0.71
CLCN4-203ENST00000421085 EPHA8P29322 1005 aaPredicted RBP10.64□□□□□ -0.71
CLCN4-203ENST00000421085 C9orf50Q5SZB4 431 aa10.64□□□□□ -0.71
CLCN4-203ENST00000421085 TDHQ8IZJ6 230 aa10.64□□□□□ -0.71
CLCN4-203ENST00000421085 FAM131CQ96AQ9 280 aa10.64□□□□□ -0.71
CLCN4-203ENST00000421085 TCFL5Q9UL49 500 aa10.64□□□□□ -0.71
CLCN4-203ENST00000421085 A1L4Q6 167 aa10.64□□□□□ -0.71
CLCN4-203ENST00000421085 SLC25A17O43808 307 aa10.64□□□□□ -0.71
CLCN4-203ENST00000421085 DLL1O00548 723 aa10.63□□□□□ -0.71
CLCN4-203ENST00000421085 GFRA1P56159 465 aa10.63□□□□□ -0.71
CLCN4-203ENST00000421085 ECSCRQ19T08 205 aa10.63□□□□□ -0.71
CLCN4-203ENST00000421085 SNAI3Q3KNW1 292 aa10.63□□□□□ -0.71
CLCN4-203ENST00000421085 HCP5Q6MZN7 132 aa10.63□□□□□ -0.71
CLCN4-203ENST00000421085 NIT1Q86X76 327 aa10.63□□□□□ -0.71
CLCN4-203ENST00000421085 G6PC2Q9NQR9 355 aa10.63□□□□□ -0.71
CLCN4-203ENST00000421085 SLC25A10Q9UBX3 287 aaPredicted RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms