RNA–Protein interactions for RNA: ENST00000420101.6

SEMA4D-204, Transcript of semaphorin 4D, humanhuman

TSL 1 (best) BASIC

Gene SEMA4D, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-204ENST00000420101 PHLDA2Q53GA4 152 aa12.53□□□□□ -0.4
SEMA4D-204ENST00000420101 ZNF880Q6PDB4 577 aa12.53□□□□□ -0.4
SEMA4D-204ENST00000420101 C16orf82Q7Z2V1 217 aa12.53□□□□□ -0.4
SEMA4D-204ENST00000420101 C1QTNF5Q9BXJ0 243 aa12.53□□□□□ -0.4
SEMA4D-204ENST00000420101 OR51B6Q9H340 312 aa12.53□□□□□ -0.4
SEMA4D-204ENST00000420101 IL36GQ9NZH8 169 aa12.53□□□□□ -0.4
SEMA4D-204ENST00000420101 UBE2J1Q9Y385 318 aaPredicted RBP12.53□□□□□ -0.4
SEMA4D-204ENST00000420101 APC2O95996 2303 aa12.52□□□□□ -0.4
SEMA4D-204ENST00000420101 SSSCA1O60232 199 aa12.52□□□□□ -0.41
SEMA4D-204ENST00000420101 EDN3P14138 238 aa12.52□□□□□ -0.41
SEMA4D-204ENST00000420101 PAFAH1B2P68402 229 aa12.52□□□□□ -0.41
SEMA4D-204ENST00000420101 MRPS11P82912 194 aaKnown RBP12.52□□□□□ -0.41
SEMA4D-204ENST00000420101 CNN3Q15417 329 aaKnown RBP12.52□□□□□ -0.41
SEMA4D-204ENST00000420101 MRPL21Q7Z2W9 205 aaKnown RBP12.52□□□□□ -0.41
SEMA4D-204ENST00000420101 SELENOHQ8IZQ5 122 aaKnown RBP12.52□□□□□ -0.41
SEMA4D-204ENST00000420101 Q8NA96 180 aa12.52□□□□□ -0.41
SEMA4D-204ENST00000420101 OR2T10Q8NGZ9 312 aa12.52□□□□□ -0.41
SEMA4D-204ENST00000420101 PIGTQ969N2 578 aa12.52□□□□□ -0.41
SEMA4D-204ENST00000420101 APOBEC3DQ96AK3 386 aaPredicted RBP12.52□□□□□ -0.41
SEMA4D-204ENST00000420101 MIEN1Q9BRT3 115 aa12.52□□□□□ -0.41
SEMA4D-204ENST00000420101 ELL3Q9HB65 397 aaPredicted RBP12.52□□□□□ -0.41
SEMA4D-204ENST00000420101 PLSCR4Q9NRQ2 329 aa12.52□□□□□ -0.41
SEMA4D-204ENST00000420101 SH3BGRL2Q9UJC5 107 aa12.52□□□□□ -0.41
SEMA4D-204ENST00000420101 SCGB1D1O95968 90 aa12.51□□□□□ -0.41
SEMA4D-204ENST00000420101 OR4A8P0C604 315 aa12.51□□□□□ -0.41
SEMA4D-204ENST00000420101 FXYD4P59646 89 aa12.51□□□□□ -0.41
SEMA4D-204ENST00000420101 MRPL49Q13405 166 aaKnown RBP12.51□□□□□ -0.41
SEMA4D-204ENST00000420101 TBC1D28Q2M2D7 210 aa12.51□□□□□ -0.41
SEMA4D-204ENST00000420101 NMSQ5H8A3 153 aa12.51□□□□□ -0.41
SEMA4D-204ENST00000420101 SLC25A24Q6NUK1 477 aa12.51□□□□□ -0.41
SEMA4D-204ENST00000420101 TEX38Q6PEX7 206 aa12.51□□□□□ -0.41
SEMA4D-204ENST00000420101 SEM1Q6ZVN7 128 aa12.51□□□□□ -0.41
SEMA4D-204ENST00000420101 RPRMLQ8N4K4 120 aa12.51□□□□□ -0.41
SEMA4D-204ENST00000420101 OR5D18Q8NGL1 313 aa12.51□□□□□ -0.41
SEMA4D-204ENST00000420101 STARD4Q96DR4 205 aa12.51□□□□□ -0.41
SEMA4D-204ENST00000420101 POM121L2Q96KW2 1035 aa12.51□□□□□ -0.41
SEMA4D-204ENST00000420101 TP53RKQ96S44 253 aa12.51□□□□□ -0.41
SEMA4D-204ENST00000420101 SMIM7Q9BQ49 75 aa12.51□□□□□ -0.41
SEMA4D-204ENST00000420101 OR51I2Q9H344 312 aa12.51□□□□□ -0.41
SEMA4D-204ENST00000420101 CBLN4Q9NTU7 201 aa12.51□□□□□ -0.41
SEMA4D-204ENST00000420101 FAM215AQ9Y5M1 114 aa12.51□□□□□ -0.41
SEMA4D-204ENST00000420101 ZFHX4Q86UP3 3567 aa12.51□□□□□ -0.41
SEMA4D-204ENST00000420101 ZFP92A6NM28 416 aa12.51□□□□□ -0.41
SEMA4D-204ENST00000420101 TNFSF13O75888 250 aa12.51□□□□□ -0.41
SEMA4D-204ENST00000420101 WNT2P09544 360 aa12.51□□□□□ -0.41
SEMA4D-204ENST00000420101 GABRA6Q16445 453 aa12.51□□□□□ -0.41
SEMA4D-204ENST00000420101 ZNF324BQ6AW86 544 aaPredicted RBP12.51□□□□□ -0.41
SEMA4D-204ENST00000420101 CXorf67Q86X51 503 aaPredicted RBP12.51□□□□□ -0.41
SEMA4D-204ENST00000420101 PIGCQ92535 297 aa12.51□□□□□ -0.41
SEMA4D-204ENST00000420101 SNRNP40Q96DI7 357 aaKnown RBP12.51□□□□□ -0.41
SEMA4D-204ENST00000420101 FAAP24Q9BTP7 215 aa12.51□□□□□ -0.41
SEMA4D-204ENST00000420101 MAGT1Q9H0U3 335 aa12.51□□□□□ -0.41
SEMA4D-204ENST00000420101 CHODLQ9H9P2 273 aa12.51□□□□□ -0.41
SEMA4D-204ENST00000420101 TIMM9Q9Y5J7 89 aa12.51□□□□□ -0.41
SEMA4D-204ENST00000420101 FREM1Q5H8C1 2179 aa12.5□□□□□ -0.41
SEMA4D-204ENST00000420101 hCG_38984A0A1B0GV85 526 aa12.5□□□□□ -0.41
SEMA4D-204ENST00000420101 NRASP01111 189 aa12.5□□□□□ -0.41
SEMA4D-204ENST00000420101 PPYP01298 95 aa12.5□□□□□ -0.41
SEMA4D-204ENST00000420101 AADACP22760 399 aa12.5□□□□□ -0.41
SEMA4D-204ENST00000420101 OMGP23515 440 aa12.5□□□□□ -0.41
SEMA4D-204ENST00000420101 ADIRFQ15847 76 aa12.5□□□□□ -0.41
SEMA4D-204ENST00000420101 TMEM41BQ5BJD5 291 aa12.5□□□□□ -0.41
SEMA4D-204ENST00000420101 SAPCD1Q5SSQ6 148 aa12.5□□□□□ -0.41
SEMA4D-204ENST00000420101 MEX3BQ6ZN04 569 aaKnown RBP12.5□□□□□ -0.41
SEMA4D-204ENST00000420101 ODF3L1Q8IXM7 274 aa12.5□□□□□ -0.41
SEMA4D-204ENST00000420101 PRR18Q8N4B5 295 aa12.5□□□□□ -0.41
SEMA4D-204ENST00000420101 OR5D13Q8NGL4 314 aa12.5□□□□□ -0.41
SEMA4D-204ENST00000420101 ZCCHC14Q8WYQ9 949 aaKnown RBP12.5□□□□□ -0.41
SEMA4D-204ENST00000420101 REPIN1Q9BWE0 567 aaKnown RBP12.5□□□□□ -0.41
SEMA4D-204ENST00000420101 MANBALQ9NQG1 85 aa12.5□□□□□ -0.41
SEMA4D-204ENST00000420101 RPRMQ9NS64 109 aa12.5□□□□□ -0.41
SEMA4D-204ENST00000420101 POLR3KQ9Y2Y1 108 aaPredicted RBP12.5□□□□□ -0.41
SEMA4D-204ENST00000420101 ACACAQ13085 2346 aa12.49□□□□□ -0.41
SEMA4D-204ENST00000420101 HPRT1P00492 218 aa12.49□□□□□ -0.41
SEMA4D-204ENST00000420101 S100GP29377 79 aa12.49□□□□□ -0.41
SEMA4D-204ENST00000420101 TIMP3P35625 211 aa12.49□□□□□ -0.41
SEMA4D-204ENST00000420101 ASCL1P50553 236 aa12.49□□□□□ -0.41
SEMA4D-204ENST00000420101 MEF2BQ02080 365 aaPredicted RBP12.49□□□□□ -0.41
SEMA4D-204ENST00000420101 COTL1Q14019 142 aa12.49□□□□□ -0.41
SEMA4D-204ENST00000420101 PRR30Q53SZ7 412 aaPredicted RBP12.49□□□□□ -0.41
SEMA4D-204ENST00000420101 PLCXD3Q63HM9 321 aa12.49□□□□□ -0.41
SEMA4D-204ENST00000420101 ALKBH2Q6NS38 261 aa12.49□□□□□ -0.41
SEMA4D-204ENST00000420101 LHFPL2Q6ZUX7 228 aa12.49□□□□□ -0.41
SEMA4D-204ENST00000420101 BORCS8Q96FH0 119 aa12.49□□□□□ -0.41
SEMA4D-204ENST00000420101 RNF115Q9Y4L5 304 aa12.49□□□□□ -0.41
SEMA4D-204ENST00000420101 ZNF816-ZNF321PA0A0X1KG74 233 aa12.48□□□□□ -0.41
SEMA4D-204ENST00000420101 FAM90A10PA6NDY2 464 aa12.48□□□□□ -0.41
SEMA4D-204ENST00000420101 FAM90A18PA6NE21 464 aa12.48□□□□□ -0.41
SEMA4D-204ENST00000420101 FAM90A16PA6NEW6 464 aa12.48□□□□□ -0.41
SEMA4D-204ENST00000420101 FAM90A20PA6NIJ5 464 aa12.48□□□□□ -0.41
SEMA4D-204ENST00000420101 FAM90A8PA6NJQ4 464 aa12.48□□□□□ -0.41
SEMA4D-204ENST00000420101 FAM90A7PA6NKC0 464 aa12.48□□□□□ -0.41
SEMA4D-204ENST00000420101 CEBPZOSA8MTT3 80 aa12.48□□□□□ -0.41
SEMA4D-204ENST00000420101 FAM90A22PA8MWA6 464 aa12.48□□□□□ -0.41
SEMA4D-204ENST00000420101 FAM90A12PA8MX19 464 aa12.48□□□□□ -0.41
SEMA4D-204ENST00000420101 FAM90A5PA8MXJ8 464 aa12.48□□□□□ -0.41
SEMA4D-204ENST00000420101 FAM90A23PA8MXZ1 464 aa12.48□□□□□ -0.41
SEMA4D-204ENST00000420101 AGFG2O95081 481 aa12.48□□□□□ -0.41
SEMA4D-204ENST00000420101 NGFP01138 241 aa12.48□□□□□ -0.41
SEMA4D-204ENST00000420101 CTXN2P0C2S0 81 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms