RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 TM2D1Q9BX74 207 aa5.51□□□□□ -1.53
HMGN1-205ENST00000419378 PRSS22Q9GZN4 317 aa5.51□□□□□ -1.53
HMGN1-205ENST00000419378 CTDSP1Q9GZU7 261 aa5.51□□□□□ -1.53
HMGN1-205ENST00000419378 PLGRKTQ9HBL7 147 aa5.51□□□□□ -1.53
HMGN1-205ENST00000419378 TAF9BQ9HBM6 251 aa5.51□□□□□ -1.53
HMGN1-205ENST00000419378 RAB9BQ9NP90 201 aa5.51□□□□□ -1.53
HMGN1-205ENST00000419378 HSF4Q9ULV5 492 aa5.51□□□□□ -1.53
HMGN1-205ENST00000419378 RRP15Q9Y3B9 282 aaKnown RBP5.51□□□□□ -1.53
HMGN1-205ENST00000419378 NOTCH1P46531 2555 aa5.5□□□□□ -1.53
HMGN1-205ENST00000419378 TRAV1-2A0A0B4J238 106 aa5.5□□□□□ -1.53
HMGN1-205ENST00000419378 TRDV1A0A1B0GX56 115 aa5.5□□□□□ -1.53
HMGN1-205ENST00000419378 CCRL2O00421 344 aa5.5□□□□□ -1.53
HMGN1-205ENST00000419378 SLC31A2O15432 143 aa5.5□□□□□ -1.53
HMGN1-205ENST00000419378 PROP1O75360 226 aa5.5□□□□□ -1.53
HMGN1-205ENST00000419378 OR2F2O95006 317 aa5.5□□□□□ -1.53
HMGN1-205ENST00000419378 NUDT3O95989 172 aa5.5□□□□□ -1.53
HMGN1-205ENST00000419378 HBZP02008 142 aa5.5□□□□□ -1.53
HMGN1-205ENST00000419378 FAM106CPP0CH98 169 aa5.5□□□□□ -1.53
HMGN1-205ENST00000419378 MYL9P24844 172 aa5.5□□□□□ -1.53
HMGN1-205ENST00000419378 PSMB9P28065 219 aa5.5□□□□□ -1.53
HMGN1-205ENST00000419378 BLVRBP30043 206 aaPredicted RBP5.5□□□□□ -1.53
HMGN1-205ENST00000419378 RAB7AP51149 207 aa5.5□□□□□ -1.53
HMGN1-205ENST00000419378 CLDN12P56749 244 aa5.5□□□□□ -1.53
HMGN1-205ENST00000419378 ZNF816Q0VGE8 651 aaPredicted RBP5.5□□□□□ -1.53
HMGN1-205ENST00000419378 HMGN3Q15651 99 aa5.5□□□□□ -1.53
HMGN1-205ENST00000419378 Q3ZCU0 254 aa5.5□□□□□ -1.53
HMGN1-205ENST00000419378 HIST2H2BDQ6DRA6 164 aa5.5□□□□□ -1.53
HMGN1-205ENST00000419378 ZNF773Q6PK81 442 aa5.5□□□□□ -1.53
HMGN1-205ENST00000419378 Q6ZTK2 550 aa5.5□□□□□ -1.53
HMGN1-205ENST00000419378 C6orf201Q7Z4U5 140 aa5.5□□□□□ -1.53
HMGN1-205ENST00000419378 ZNF554Q86TJ5 538 aa5.5□□□□□ -1.53
HMGN1-205ENST00000419378 OR8H3Q8N146 312 aa5.5□□□□□ -1.53
HMGN1-205ENST00000419378 DRAM1Q8N682 238 aa5.5□□□□□ -1.53
HMGN1-205ENST00000419378 ZNF439Q8NDP4 499 aa5.5□□□□□ -1.53
HMGN1-205ENST00000419378 OR10V1Q8NGI7 309 aa5.5□□□□□ -1.53
HMGN1-205ENST00000419378 CAPSLQ8WWF8 208 aa5.5□□□□□ -1.53
HMGN1-205ENST00000419378 FCGR1BQ92637 280 aa5.5□□□□□ -1.53
HMGN1-205ENST00000419378 FAM3DQ96BQ1 224 aa5.5□□□□□ -1.53
HMGN1-205ENST00000419378 AKR1E2Q96JD6 320 aa5.5□□□□□ -1.53
HMGN1-205ENST00000419378 RBM14Q96PK6 669 aaKnown RBP5.5□□□□□ -1.53
HMGN1-205ENST00000419378 NEDD4LQ96PU5 975 aa5.5□□□□□ -1.53
HMGN1-205ENST00000419378 URM1Q9BTM9 101 aaKnown RBP5.5□□□□□ -1.53
HMGN1-205ENST00000419378 FAAP24Q9BTP7 215 aa5.5□□□□□ -1.53
HMGN1-205ENST00000419378 YTHDF1Q9BYJ9 559 aaKnown RBP5.5□□□□□ -1.53
HMGN1-205ENST00000419378 LPAR5Q9H1C0 372 aa5.5□□□□□ -1.53
HMGN1-205ENST00000419378 GNG12Q9UBI6 72 aa5.5□□□□□ -1.53
HMGN1-205ENST00000419378 V9GY05 133 aa5.5□□□□□ -1.53
HMGN1-205ENST00000419378 TET2Q6N021 2002 aaPredicted RBP5.5□□□□□ -1.53
HMGN1-205ENST00000419378 PRKDCP78527 4128 aaKnown RBP5.49□□□□□ -1.53
HMGN1-205ENST00000419378 IGHV1-3A0A0C4DH29 117 aa5.49□□□□□ -1.53
HMGN1-205ENST00000419378 SH2D7A6NKC9 451 aaPredicted RBP5.49□□□□□ -1.53
HMGN1-205ENST00000419378 FOXI3A8MTJ6 420 aaPredicted RBP5.49□□□□□ -1.53
HMGN1-205ENST00000419378 PDCD5O14737 125 aa5.49□□□□□ -1.53
HMGN1-205ENST00000419378 LDLRAD4O15165 306 aa5.49□□□□□ -1.53
HMGN1-205ENST00000419378 SOCS1O15524 211 aa5.49□□□□□ -1.53
HMGN1-205ENST00000419378 NAPSAO96009 420 aa5.49□□□□□ -1.53
HMGN1-205ENST00000419378 IGKV1D-33P01593 117 aa5.49□□□□□ -1.53
HMGN1-205ENST00000419378 IGKV1-33P01594 117 aa5.49□□□□□ -1.53
HMGN1-205ENST00000419378 SNRNP70P08621 437 aaKnown RBP5.49□□□□□ -1.53
HMGN1-205ENST00000419378 TMEM11P17152 192 aa5.49□□□□□ -1.53
HMGN1-205ENST00000419378 GALP22466 123 aa5.49□□□□□ -1.53
HMGN1-205ENST00000419378 IL3RAP26951 378 aa5.49□□□□□ -1.53
HMGN1-205ENST00000419378 VDAC2P45880 294 aaPredicted RBP5.49□□□□□ -1.53
HMGN1-205ENST00000419378 REG1BP48304 166 aa5.49□□□□□ -1.53
HMGN1-205ENST00000419378 ZNF137PP52743 207 aa5.49□□□□□ -1.53
HMGN1-205ENST00000419378 ELLP55199 621 aaPredicted RBP5.49□□□□□ -1.53
HMGN1-205ENST00000419378 OR10A3P58181 314 aa5.49□□□□□ -1.53
HMGN1-205ENST00000419378 GNMTQ14749 295 aa5.49□□□□□ -1.53
HMGN1-205ENST00000419378 C2orf68Q2NKX9 166 aa5.49□□□□□ -1.53
HMGN1-205ENST00000419378 CT45A1Q5HYN5 189 aa5.49□□□□□ -1.53
HMGN1-205ENST00000419378 HES5Q5TA89 166 aa5.49□□□□□ -1.53
HMGN1-205ENST00000419378 C22orf42Q6IC83 251 aa5.49□□□□□ -1.53
HMGN1-205ENST00000419378 SLC25A48Q6ZT89 311 aaKnown RBP5.49□□□□□ -1.53
HMGN1-205ENST00000419378 C5orf24Q7Z6I8 188 aa5.49□□□□□ -1.53
HMGN1-205ENST00000419378 MOB3BQ86TA1 216 aa5.49□□□□□ -1.53
HMGN1-205ENST00000419378 FAM89BQ8N5H3 189 aa5.49□□□□□ -1.53
HMGN1-205ENST00000419378 OR51D1Q8NGF3 324 aa5.49□□□□□ -1.53
HMGN1-205ENST00000419378 CT45A3Q8NHU0 189 aa5.49□□□□□ -1.53
HMGN1-205ENST00000419378 FAM110DQ8TAY7 271 aaPredicted RBP5.49□□□□□ -1.53
HMGN1-205ENST00000419378 C2CD4CQ8TF44 421 aa5.49□□□□□ -1.53
HMGN1-205ENST00000419378 WIPF2Q8TF74 440 aaPredicted RBP5.49□□□□□ -1.53
HMGN1-205ENST00000419378 RTN4IP1Q8WWV3 396 aaPredicted RBP5.49□□□□□ -1.53
HMGN1-205ENST00000419378 ST6GALNAC6Q969X2 333 aa5.49□□□□□ -1.53
HMGN1-205ENST00000419378 HDHD3Q9BSH5 251 aaPredicted RBP5.49□□□□□ -1.53
HMGN1-205ENST00000419378 MMP27Q9H306 513 aa5.49□□□□□ -1.53
HMGN1-205ENST00000419378 CHMP1AQ9HD42 196 aaPredicted RBP5.49□□□□□ -1.53
HMGN1-205ENST00000419378 OR2S2Q9NQN1 319 aa5.49□□□□□ -1.53
HMGN1-205ENST00000419378 PLEKHJ1Q9NW61 149 aa5.49□□□□□ -1.53
HMGN1-205ENST00000419378 KCNIP1Q9NZI2 227 aa5.49□□□□□ -1.53
HMGN1-205ENST00000419378 JPT1Q9UK76 154 aa5.49□□□□□ -1.53
HMGN1-205ENST00000419378 MOB4Q9Y3A3 225 aa5.49□□□□□ -1.53
HMGN1-205ENST00000419378 LRRC42Q9Y546 428 aa5.49□□□□□ -1.53
HMGN1-205ENST00000419378 TRBV6-6A0A0A6YYG2 114 aa5.48□□□□□ -1.53
HMGN1-205ENST00000419378 IGHV3-72A0A0B4J1Y9 119 aa5.48□□□□□ -1.53
HMGN1-205ENST00000419378 TMEM272A0A1B0GTI8 110 aa5.48□□□□□ -1.53
HMGN1-205ENST00000419378 IFITM5A6NNB3 132 aa5.48□□□□□ -1.53
HMGN1-205ENST00000419378 M0QZK8 103 aa5.48□□□□□ -1.53
HMGN1-205ENST00000419378 TXNL1O43396 289 aa5.48□□□□□ -1.53
HMGN1-205ENST00000419378 GAPDHP04406 335 aaKnown RBP5.48□□□□□ -1.53
HMGN1-205ENST00000419378 CD28P10747 220 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms