RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 Q6ZRM9 215 aa12.11□□□□□ -0.47
HLA-DPA1-242ENST00000419277 H2BFWTQ7Z2G1 175 aa12.11□□□□□ -0.47
HLA-DPA1-242ENST00000419277 ODF3L1Q8IXM7 274 aa12.11□□□□□ -0.47
HLA-DPA1-242ENST00000419277 VKORC1Q9BQB6 163 aa12.11□□□□□ -0.47
HLA-DPA1-242ENST00000419277 EGLN1Q9GZT9 426 aa12.11□□□□□ -0.47
HLA-DPA1-242ENST00000419277 SH3BGRL3Q9H299 93 aa12.11□□□□□ -0.47
HLA-DPA1-242ENST00000419277 METRNQ9UJH8 293 aa12.11□□□□□ -0.47
HLA-DPA1-242ENST00000419277 USF3Q68DE3 2245 aa12.11□□□□□ -0.47
HLA-DPA1-242ENST00000419277 NKX6-3A6NJ46 265 aa12.11□□□□□ -0.47
HLA-DPA1-242ENST00000419277 ZNF729A6NN14 1252 aaPredicted RBP12.11□□□□□ -0.47
HLA-DPA1-242ENST00000419277 PPIHO43447 177 aaKnown RBP12.11□□□□□ -0.47
HLA-DPA1-242ENST00000419277 CASP6P55212 293 aa12.11□□□□□ -0.47
HLA-DPA1-242ENST00000419277 RPP30P78346 268 aaKnown RBP12.11□□□□□ -0.47
HLA-DPA1-242ENST00000419277 EDDM3AQ14507 147 aa12.11□□□□□ -0.47
HLA-DPA1-242ENST00000419277 PDLIM3Q53GG5 364 aaPredicted RBP12.11□□□□□ -0.47
HLA-DPA1-242ENST00000419277 LILRB2Q8N423 598 aa12.11□□□□□ -0.47
HLA-DPA1-242ENST00000419277 TMEM217Q8N7C4 229 aa12.11□□□□□ -0.47
HLA-DPA1-242ENST00000419277 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.11□□□□□ -0.47
HLA-DPA1-242ENST00000419277 BOLLQ8N9W6 283 aaKnown RBP12.11□□□□□ -0.47
HLA-DPA1-242ENST00000419277 OR52E5Q8NH55 327 aa12.11□□□□□ -0.47
HLA-DPA1-242ENST00000419277 FAM213BQ8TBF2 198 aa12.11□□□□□ -0.47
HLA-DPA1-242ENST00000419277 CORO2AQ92828 525 aa12.11□□□□□ -0.47
HLA-DPA1-242ENST00000419277 CALYQ9NYX4 217 aa12.11□□□□□ -0.47
HLA-DPA1-242ENST00000419277 PLA2G2EQ9NZK7 142 aa12.11□□□□□ -0.47
HLA-DPA1-242ENST00000419277 ANKRD11Q6UB99 2663 aaPredicted RBP12.1□□□□□ -0.47
HLA-DPA1-242ENST00000419277 PRR14LQ5THK1 2151 aa12.1□□□□□ -0.47
HLA-DPA1-242ENST00000419277 KBTBD11-OT1A0A1B0GTJ5 212 aa12.1□□□□□ -0.47
HLA-DPA1-242ENST00000419277 MARCH11A6NNE9 402 aa12.1□□□□□ -0.47
HLA-DPA1-242ENST00000419277 DNASE2O00115 360 aaPredicted RBP12.1□□□□□ -0.47
HLA-DPA1-242ENST00000419277 TSPAN4O14817 238 aa12.1□□□□□ -0.47
HLA-DPA1-242ENST00000419277 NDUFS6O75380 124 aaKnown RBP12.1□□□□□ -0.47
HLA-DPA1-242ENST00000419277 H2AFB1P0C5Y9 115 aa12.1□□□□□ -0.47
HLA-DPA1-242ENST00000419277 DUTP33316 252 aaKnown RBP12.1□□□□□ -0.47
HLA-DPA1-242ENST00000419277 LOXL3P58215 753 aa12.1□□□□□ -0.47
HLA-DPA1-242ENST00000419277 AKR1C1Q04828 323 aa12.1□□□□□ -0.47
HLA-DPA1-242ENST00000419277 VHLLQ6RSH7 139 aa12.1□□□□□ -0.47
HLA-DPA1-242ENST00000419277 CLEC9AQ6UXN8 241 aa12.1□□□□□ -0.47
HLA-DPA1-242ENST00000419277 ZNF295-AS1Q8N0V1 137 aa12.1□□□□□ -0.47
HLA-DPA1-242ENST00000419277 CISD2Q8N5K1 135 aaKnown RBP12.1□□□□□ -0.47
HLA-DPA1-242ENST00000419277 RND1Q92730 232 aa12.1□□□□□ -0.47
HLA-DPA1-242ENST00000419277 KCNJ16Q9NPI9 418 aa12.1□□□□□ -0.47
HLA-DPA1-242ENST00000419277 CLN8Q9UBY8 286 aa12.1□□□□□ -0.47
HLA-DPA1-242ENST00000419277 NDRG3Q9UGV2 375 aa12.1□□□□□ -0.47
HLA-DPA1-242ENST00000419277 PSG11Q9UQ72 335 aa12.1□□□□□ -0.47
HLA-DPA1-242ENST00000419277 FRYQ5TBA9 3013 aa12.1□□□□□ -0.47
HLA-DPA1-242ENST00000419277 TRAV38-1A0A0B4J264 116 aa12.09□□□□□ -0.47
HLA-DPA1-242ENST00000419277 SIGLEC5O15389 551 aa12.09□□□□□ -0.47
HLA-DPA1-242ENST00000419277 CGB3P0DN86 165 aa12.09□□□□□ -0.47
HLA-DPA1-242ENST00000419277 CGB7P0DN87 165 aa12.09□□□□□ -0.47
HLA-DPA1-242ENST00000419277 ERVK-16P61578 105 aa12.09□□□□□ -0.47
HLA-DPA1-242ENST00000419277 MEF2CQ06413 473 aaPredicted RBP12.09□□□□□ -0.47
HLA-DPA1-242ENST00000419277 ZNF788Q6ZQV5 615 aa12.09□□□□□ -0.47
HLA-DPA1-242ENST00000419277 ZNF525Q8N782 197 aa12.09□□□□□ -0.47
HLA-DPA1-242ENST00000419277 EIF5A2Q9GZV4 153 aaKnown RBP12.09□□□□□ -0.47
HLA-DPA1-242ENST00000419277 MS4A7Q9GZW8 240 aaPredicted RBP12.09□□□□□ -0.47
HLA-DPA1-242ENST00000419277 SLC35B3Q9H1N7 401 aa12.09□□□□□ -0.47
HLA-DPA1-242ENST00000419277 ESRP2Q9H6T0 727 aaKnown RBP12.09□□□□□ -0.47
HLA-DPA1-242ENST00000419277 GFOD1Q9NXC2 390 aa12.09□□□□□ -0.47
HLA-DPA1-242ENST00000419277 APC2O95996 2303 aa12.09□□□□□ -0.47
HLA-DPA1-242ENST00000419277 PLCE1Q9P212 2302 aa12.09□□□□□ -0.47
HLA-DPA1-242ENST00000419277 CACNA1DQ01668 2161 aa12.09□□□□□ -0.47
HLA-DPA1-242ENST00000419277 ZFHX4Q86UP3 3567 aa12.09□□□□□ -0.47
HLA-DPA1-242ENST00000419277 C17orf100A8MU93 164 aa12.08□□□□□ -0.47
HLA-DPA1-242ENST00000419277 C3orf80F5H4A9 247 aa12.08□□□□□ -0.47
HLA-DPA1-242ENST00000419277 RAMP3O60896 148 aa12.08□□□□□ -0.47
HLA-DPA1-242ENST00000419277 S1PR2O95136 353 aa12.08□□□□□ -0.47
HLA-DPA1-242ENST00000419277 KRASP01116 189 aa12.08□□□□□ -0.47
HLA-DPA1-242ENST00000419277 MBP02144 154 aa12.08□□□□□ -0.47
HLA-DPA1-242ENST00000419277 TAGLN2P37802 199 aaKnown RBP12.08□□□□□ -0.47
HLA-DPA1-242ENST00000419277 RPL30P62888 115 aaKnown RBP12.08□□□□□ -0.47
HLA-DPA1-242ENST00000419277 PMS2P11Q13670 270 aa12.08□□□□□ -0.47
HLA-DPA1-242ENST00000419277 GUCA2BQ16661 112 aa12.08□□□□□ -0.47
HLA-DPA1-242ENST00000419277 LRRC75BQ2VPJ9 315 aa12.08□□□□□ -0.47
HLA-DPA1-242ENST00000419277 CENPVQ7Z7K6 275 aaPredicted RBP12.08□□□□□ -0.47
HLA-DPA1-242ENST00000419277 ZNF808Q8N4W9 903 aaPredicted RBP12.08□□□□□ -0.47
HLA-DPA1-242ENST00000419277 OR4S2Q8NH73 311 aa12.08□□□□□ -0.47
HLA-DPA1-242ENST00000419277 UBALD1Q8TB05 177 aa12.08□□□□□ -0.47
HLA-DPA1-242ENST00000419277 RAB39BQ96DA2 213 aa12.08□□□□□ -0.47
HLA-DPA1-242ENST00000419277 C5orf30Q96GV9 206 aa12.08□□□□□ -0.47
HLA-DPA1-242ENST00000419277 CLCC1Q96S66 551 aa12.08□□□□□ -0.47
HLA-DPA1-242ENST00000419277 AIFM2Q9BRQ8 373 aa12.08□□□□□ -0.47
HLA-DPA1-242ENST00000419277 ABHD14AQ9BUJ0 271 aa12.08□□□□□ -0.47
HLA-DPA1-242ENST00000419277 CADP27708 2225 aa12.08□□□□□ -0.48
HLA-DPA1-242ENST00000419277 hADV38S2A0JD32 116 aa12.08□□□□□ -0.48
HLA-DPA1-242ENST00000419277 ZG16O60844 167 aa12.08□□□□□ -0.48
HLA-DPA1-242ENST00000419277 NQO2P16083 231 aa12.08□□□□□ -0.48
HLA-DPA1-242ENST00000419277 THBS3P49746 956 aa12.08□□□□□ -0.48
HLA-DPA1-242ENST00000419277 EDDM3BP56851 147 aa12.08□□□□□ -0.48
HLA-DPA1-242ENST00000419277 SRSF3P84103 164 aaKnown RBP12.08□□□□□ -0.48
HLA-DPA1-242ENST00000419277 RHEBQ15382 184 aa12.08□□□□□ -0.48
HLA-DPA1-242ENST00000419277 ATRAIDQ6UW56 229 aa12.08□□□□□ -0.48
HLA-DPA1-242ENST00000419277 OR10G4Q8NGN3 311 aa12.08□□□□□ -0.48
HLA-DPA1-242ENST00000419277 DTD1Q8TEA8 209 aa12.08□□□□□ -0.48
HLA-DPA1-242ENST00000419277 SNRNP40Q96DI7 357 aaKnown RBP12.08□□□□□ -0.48
HLA-DPA1-242ENST00000419277 ZNF251Q9BRH9 671 aa12.08□□□□□ -0.48
HLA-DPA1-242ENST00000419277 TMEM147Q9BVK8 224 aa12.08□□□□□ -0.48
HLA-DPA1-242ENST00000419277 COL25A1Q9BXS0 654 aaPredicted RBP12.08□□□□□ -0.48
HLA-DPA1-242ENST00000419277 IFI27L2Q9H2X8 130 aa12.08□□□□□ -0.48
HLA-DPA1-242ENST00000419277 GAL3ST2Q9H3Q3 398 aa12.08□□□□□ -0.48
HLA-DPA1-242ENST00000419277 FAM96BQ9Y3D0 163 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms