RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 FAM90A22PA8MWA6 464 aa6.8□□□□□ -1.32
HMGXB4-202ENST00000418170 FAM90A12PA8MX19 464 aa6.8□□□□□ -1.32
HMGXB4-202ENST00000418170 FAM90A5PA8MXJ8 464 aa6.8□□□□□ -1.32
HMGXB4-202ENST00000418170 FAM90A23PA8MXZ1 464 aa6.8□□□□□ -1.32
HMGXB4-202ENST00000418170 CRYAAP02489 173 aa6.8□□□□□ -1.32
HMGXB4-202ENST00000418170 FAM90A15PP0C7V4 464 aa6.8□□□□□ -1.32
HMGXB4-202ENST00000418170 FAM90A13PP0C7W8 464 aa6.8□□□□□ -1.32
HMGXB4-202ENST00000418170 FAM90A14PP0C7W9 464 aa6.8□□□□□ -1.32
HMGXB4-202ENST00000418170 FAM90A24PP0C7X0 464 aa6.8□□□□□ -1.32
HMGXB4-202ENST00000418170 CRYGSP22914 178 aa6.8□□□□□ -1.32
HMGXB4-202ENST00000418170 RPS20P60866 119 aaKnown RBP6.8□□□□□ -1.32
HMGXB4-202ENST00000418170 ZDHHC23Q8IYP9 409 aa6.8□□□□□ -1.32
HMGXB4-202ENST00000418170 CORO2AQ92828 525 aa6.8□□□□□ -1.32
HMGXB4-202ENST00000418170 KCNIP2Q9NS61 270 aa6.8□□□□□ -1.32
HMGXB4-202ENST00000418170 ATP23Q9Y6H3 246 aa6.8□□□□□ -1.32
HMGXB4-202ENST00000418170 SAA2-SAA4A0A096LPE2 208 aa6.8□□□□□ -1.32
HMGXB4-202ENST00000418170 IGHV2-26A0A0B4J1V2 119 aa6.8□□□□□ -1.32
HMGXB4-202ENST00000418170 IGHV5-51A0A0C4DH38 117 aa6.8□□□□□ -1.32
HMGXB4-202ENST00000418170 IGHV1-69-2A0A0G2JMI3 117 aa6.8□□□□□ -1.32
HMGXB4-202ENST00000418170 B4DGG1 531 aa6.8□□□□□ -1.32
HMGXB4-202ENST00000418170 DEGS1O15121 323 aa6.8□□□□□ -1.32
HMGXB4-202ENST00000418170 SERPINA7P05543 415 aa6.8□□□□□ -1.32
HMGXB4-202ENST00000418170 PMP22Q01453 160 aa6.8□□□□□ -1.32
HMGXB4-202ENST00000418170 ZNF90Q03938 601 aa6.8□□□□□ -1.32
HMGXB4-202ENST00000418170 C1orf61Q13536 156 aa6.8□□□□□ -1.32
HMGXB4-202ENST00000418170 OR10G8Q8NGN5 311 aa6.8□□□□□ -1.32
HMGXB4-202ENST00000418170 CSTL1Q9H114 145 aa6.8□□□□□ -1.32
HMGXB4-202ENST00000418170 CDC42EP3Q9UKI2 254 aa6.8□□□□□ -1.32
HMGXB4-202ENST00000418170 PCDH15Q96QU1 1955 aa6.79□□□□□ -1.32
HMGXB4-202ENST00000418170 FCN1O00602 326 aa6.79□□□□□ -1.32
HMGXB4-202ENST00000418170 HOXB2P14652 356 aa6.79□□□□□ -1.32
HMGXB4-202ENST00000418170 ATP5G3P48201 142 aa6.79□□□□□ -1.32
HMGXB4-202ENST00000418170 AMTP48728 403 aa6.79□□□□□ -1.32
HMGXB4-202ENST00000418170 RHBDD2Q6NTF9 364 aa6.79□□□□□ -1.32
HMGXB4-202ENST00000418170 PCSK4Q6UW60 755 aa6.79□□□□□ -1.32
HMGXB4-202ENST00000418170 SAXO1Q8IYX7 474 aa6.79□□□□□ -1.32
HMGXB4-202ENST00000418170 ZIC4Q8N9L1 334 aa6.79□□□□□ -1.32
HMGXB4-202ENST00000418170 Q8NFD4 153 aa6.79□□□□□ -1.32
HMGXB4-202ENST00000418170 CADM4Q8NFZ8 388 aa6.79□□□□□ -1.32
HMGXB4-202ENST00000418170 OR5B3Q8NH48 314 aa6.79□□□□□ -1.32
HMGXB4-202ENST00000418170 TMEM147Q9BVK8 224 aa6.79□□□□□ -1.32
HMGXB4-202ENST00000418170 GNB4Q9HAV0 340 aa6.79□□□□□ -1.32
HMGXB4-202ENST00000418170 IL36BQ9NZH7 164 aa6.79□□□□□ -1.32
HMGXB4-202ENST00000418170 WDR1O75083 606 aa6.79□□□□□ -1.32
HMGXB4-202ENST00000418170 RHOGP84095 191 aa6.79□□□□□ -1.32
HMGXB4-202ENST00000418170 KRTCAP3Q53RY4 240 aa6.79□□□□□ -1.32
HMGXB4-202ENST00000418170 OCIAD2Q56VL3 154 aa6.79□□□□□ -1.32
HMGXB4-202ENST00000418170 PNKDQ8N490 385 aa6.79□□□□□ -1.32
HMGXB4-202ENST00000418170 ZNF611Q8N823 705 aa6.79□□□□□ -1.32
HMGXB4-202ENST00000418170 OR2M3Q8NG83 312 aa6.79□□□□□ -1.32
HMGXB4-202ENST00000418170 TMEM54Q969K7 222 aa6.79□□□□□ -1.32
HMGXB4-202ENST00000418170 MRGPRX1Q96LB2 322 aa6.79□□□□□ -1.32
HMGXB4-202ENST00000418170 FBRSQ9HAH7 460 aa6.79□□□□□ -1.32
HMGXB4-202ENST00000418170 SEPSECSQ9HD40 501 aaKnown RBP6.79□□□□□ -1.32
HMGXB4-202ENST00000418170 MED12Q93074 2177 aa6.79□□□□□ -1.32
HMGXB4-202ENST00000418170 TRBV9A0A0B4J1U6 114 aa6.79□□□□□ -1.32
HMGXB4-202ENST00000418170 DPRXA6NFQ7 191 aa6.79□□□□□ -1.32
HMGXB4-202ENST00000418170 TNFRSF4P43489 277 aa6.79□□□□□ -1.32
HMGXB4-202ENST00000418170 PRRX1P54821 245 aa6.79□□□□□ -1.32
HMGXB4-202ENST00000418170 TFF2Q03403 129 aa6.79□□□□□ -1.32
HMGXB4-202ENST00000418170 TRIP6Q15654 476 aaKnown RBP6.79□□□□□ -1.32
HMGXB4-202ENST00000418170 OR56B2PQ8NGI1 322 aa6.79□□□□□ -1.32
HMGXB4-202ENST00000418170 RNF138Q8WVD3 245 aa6.79□□□□□ -1.32
HMGXB4-202ENST00000418170 LOXL4Q96JB6 756 aa6.79□□□□□ -1.32
HMGXB4-202ENST00000418170 KCNS1Q96KK3 526 aa6.79□□□□□ -1.32
HMGXB4-202ENST00000418170 UHRF2Q96PU4 802 aa6.79□□□□□ -1.32
HMGXB4-202ENST00000418170 CST9LQ9H4G1 147 aa6.79□□□□□ -1.32
HMGXB4-202ENST00000418170 OR2W1Q9Y3N9 320 aa6.79□□□□□ -1.32
HMGXB4-202ENST00000418170 IGLC7A0M8Q6 106 aa6.78□□□□□ -1.32
HMGXB4-202ENST00000418170 FAM90A26D6RGX4 464 aa6.78□□□□□ -1.32
HMGXB4-202ENST00000418170 H3BMH7 237 aa6.78□□□□□ -1.32
HMGXB4-202ENST00000418170 REG1AP05451 166 aa6.78□□□□□ -1.32
HMGXB4-202ENST00000418170 CDC34P49427 236 aaPredicted RBP6.78□□□□□ -1.32
HMGXB4-202ENST00000418170 GFERP55789 205 aa6.78□□□□□ -1.32
HMGXB4-202ENST00000418170 LGALS4P56470 323 aa6.78□□□□□ -1.32
HMGXB4-202ENST00000418170 RPL19P84098 196 aaKnown RBP6.78□□□□□ -1.32
HMGXB4-202ENST00000418170 TMEM249Q2WGJ8 235 aa6.78□□□□□ -1.32
HMGXB4-202ENST00000418170 HLA-DRB5Q30154 266 aa6.78□□□□□ -1.32
HMGXB4-202ENST00000418170 TRIM61Q5EBN2 209 aa6.78□□□□□ -1.32
HMGXB4-202ENST00000418170 ZNF324BQ6AW86 544 aaPredicted RBP6.78□□□□□ -1.32
HMGXB4-202ENST00000418170 BATF2Q8N1L9 274 aa6.78□□□□□ -1.32
HMGXB4-202ENST00000418170 PLA2G2FQ9BZM2 168 aa6.78□□□□□ -1.32
HMGXB4-202ENST00000418170 FER1L5A0AVI2 2057 aa6.78□□□□□ -1.32
HMGXB4-202ENST00000418170 CFAP47Q6ZTR5 3102 aa6.78□□□□□ -1.32
HMGXB4-202ENST00000418170 SNURFLB1AK76 121 aa6.78□□□□□ -1.32
HMGXB4-202ENST00000418170 DHHO43323 396 aa6.78□□□□□ -1.32
HMGXB4-202ENST00000418170 GDF9O60383 454 aa6.78□□□□□ -1.32
HMGXB4-202ENST00000418170 C3orf79P0CE67 100 aa6.78□□□□□ -1.32
HMGXB4-202ENST00000418170 DEFA4P12838 97 aa6.78□□□□□ -1.32
HMGXB4-202ENST00000418170 CLDN15P56746 228 aa6.78□□□□□ -1.32
HMGXB4-202ENST00000418170 OR10J3Q5JRS4 329 aa6.78□□□□□ -1.32
HMGXB4-202ENST00000418170 LDLRAD2Q5SZI1 272 aa6.78□□□□□ -1.32
HMGXB4-202ENST00000418170 PLCXD3Q63HM9 321 aa6.78□□□□□ -1.32
HMGXB4-202ENST00000418170 KIAA0895LQ68EN5 471 aa6.78□□□□□ -1.32
HMGXB4-202ENST00000418170 RDH5Q92781 318 aa6.78□□□□□ -1.32
HMGXB4-202ENST00000418170 NPCDR1Q9BY65 106 aa6.78□□□□□ -1.32
HMGXB4-202ENST00000418170 KLRF1Q9NZS2 232 aa6.78□□□□□ -1.32
HMGXB4-202ENST00000418170 WNT16Q9UBV4 365 aa6.78□□□□□ -1.32
HMGXB4-202ENST00000418170 A0A1W2PS18 150 aa6.78□□□□□ -1.32
HMGXB4-202ENST00000418170 LRP5LA4QPB2 252 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms