RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 CD40LGP29965 261 aa4.78□□□□□ -1.64
NIFKP3-201ENST00000417799 CBX5P45973 191 aa4.78□□□□□ -1.64
NIFKP3-201ENST00000417799 MRPS15P82914 257 aaKnown RBP4.78□□□□□ -1.64
NIFKP3-201ENST00000417799 PAX5Q02548 391 aa4.78□□□□□ -1.64
NIFKP3-201ENST00000417799 ARFRP1Q13795 201 aa4.78□□□□□ -1.64
NIFKP3-201ENST00000417799 ATXN7L3Q14CW9 347 aaPredicted RBP4.78□□□□□ -1.64
NIFKP3-201ENST00000417799 GRK1Q15835 563 aa4.78□□□□□ -1.64
NIFKP3-201ENST00000417799 LRRC10Q5BKY1 277 aa4.78□□□□□ -1.64
NIFKP3-201ENST00000417799 DUX4L9Q6RFH8 374 aaPredicted RBP4.78□□□□□ -1.64
NIFKP3-201ENST00000417799 LYPD2Q6UXB3 125 aa4.78□□□□□ -1.64
NIFKP3-201ENST00000417799 DNM1P46Q6ZS02 220 aa4.78□□□□□ -1.64
NIFKP3-201ENST00000417799 TRAPPC6BQ86SZ2 158 aa4.78□□□□□ -1.64
NIFKP3-201ENST00000417799 GAPTQ8N292 157 aa4.78□□□□□ -1.64
NIFKP3-201ENST00000417799 FAM216BQ8N7L0 139 aa4.78□□□□□ -1.64
NIFKP3-201ENST00000417799 TMEM185AQ8NFB2 350 aa4.78□□□□□ -1.64
NIFKP3-201ENST00000417799 PLPPR1Q8TBJ4 325 aa4.78□□□□□ -1.64
NIFKP3-201ENST00000417799 GPX8Q8TED1 209 aa4.78□□□□□ -1.64
NIFKP3-201ENST00000417799 C10orf105Q8TEF2 133 aa4.78□□□□□ -1.64
NIFKP3-201ENST00000417799 SMIM4Q8WVI0 70 aa4.78□□□□□ -1.64
NIFKP3-201ENST00000417799 FCAMRQ8WWV6 532 aa4.78□□□□□ -1.64
NIFKP3-201ENST00000417799 DYRK2Q92630 601 aa4.78□□□□□ -1.64
NIFKP3-201ENST00000417799 SGK494Q96LW2 274 aa4.78□□□□□ -1.64
NIFKP3-201ENST00000417799 SDHCQ99643 169 aaPredicted RBP4.78□□□□□ -1.64
NIFKP3-201ENST00000417799 CMSS1Q9BQ75 279 aaKnown RBP4.78□□□□□ -1.64
NIFKP3-201ENST00000417799 BPESC1Q9GZL8 116 aa4.78□□□□□ -1.64
NIFKP3-201ENST00000417799 SRRQ9GZT4 340 aa4.78□□□□□ -1.64
NIFKP3-201ENST00000417799 CHST6Q9GZX3 395 aa4.78□□□□□ -1.64
NIFKP3-201ENST00000417799 RIMS4Q9H426 269 aaPredicted RBP4.78□□□□□ -1.64
NIFKP3-201ENST00000417799 PATZ1Q9HBE1 687 aaKnown RBP4.78□□□□□ -1.64
NIFKP3-201ENST00000417799 DUX4Q9UBX2 424 aa4.78□□□□□ -1.64
NIFKP3-201ENST00000417799 MIOXQ9UGB7 285 aa4.78□□□□□ -1.64
NIFKP3-201ENST00000417799 POLQO75417 2590 aa4.78□□□□□ -1.64
NIFKP3-201ENST00000417799 DCHS2Q6V1P9 2916 aa4.77□□□□□ -1.65
NIFKP3-201ENST00000417799 IGHV4-30-2A0A087WSY4 118 aa4.77□□□□□ -1.65
NIFKP3-201ENST00000417799 TRBV6-6A0A0A6YYG2 114 aa4.77□□□□□ -1.65
NIFKP3-201ENST00000417799 TMEM30CPA0ZSE6 113 aa4.77□□□□□ -1.65
NIFKP3-201ENST00000417799 FUOMA2VDF0 154 aa4.77□□□□□ -1.65
NIFKP3-201ENST00000417799 J3QRK9 145 aa4.77□□□□□ -1.65
NIFKP3-201ENST00000417799 BUB3O43684 328 aa4.77□□□□□ -1.65
NIFKP3-201ENST00000417799 ORC5O43913 435 aa4.77□□□□□ -1.65
NIFKP3-201ENST00000417799 RBBP9O75884 186 aa4.77□□□□□ -1.65
NIFKP3-201ENST00000417799 NAPSAO96009 420 aa4.77□□□□□ -1.65
NIFKP3-201ENST00000417799 MT-ND4P03905 459 aa4.77□□□□□ -1.65
NIFKP3-201ENST00000417799 CSN2P05814 226 aa4.77□□□□□ -1.65
NIFKP3-201ENST00000417799 WNT2P09544 360 aa4.77□□□□□ -1.65
NIFKP3-201ENST00000417799 RPS2P15880 293 aaKnown RBP4.77□□□□□ -1.65
NIFKP3-201ENST00000417799 SLC25A16P16260 332 aa4.77□□□□□ -1.65
NIFKP3-201ENST00000417799 DTYMKP23919 212 aa4.77□□□□□ -1.65
NIFKP3-201ENST00000417799 ERP29P30040 261 aaKnown RBP4.77□□□□□ -1.65
NIFKP3-201ENST00000417799 GLIPR1P48060 266 aa4.77□□□□□ -1.65
NIFKP3-201ENST00000417799 SSBP1Q04837 148 aaKnown RBP4.77□□□□□ -1.65
NIFKP3-201ENST00000417799 AESQ08117 197 aa4.77□□□□□ -1.65
NIFKP3-201ENST00000417799 EDDM3AQ14507 147 aa4.77□□□□□ -1.65
NIFKP3-201ENST00000417799 CLEC12BQ2HXU8 276 aa4.77□□□□□ -1.65
NIFKP3-201ENST00000417799 RSBN1Q5VWQ0 802 aaPredicted RBP4.77□□□□□ -1.65
NIFKP3-201ENST00000417799 SLC35E4Q6ICL7 350 aa4.77□□□□□ -1.65
NIFKP3-201ENST00000417799 PRR27Q6MZM9 219 aa4.77□□□□□ -1.65
NIFKP3-201ENST00000417799 ZNF841Q6ZN19 808 aa4.77□□□□□ -1.65
NIFKP3-201ENST00000417799 ZNF497Q6ZNH5 498 aa4.77□□□□□ -1.65
NIFKP3-201ENST00000417799 C9orf139Q6ZV77 190 aa4.77□□□□□ -1.65
NIFKP3-201ENST00000417799 GDPD3Q7L5L3 318 aa4.77□□□□□ -1.65
NIFKP3-201ENST00000417799 DMBX1Q8NFW5 382 aa4.77□□□□□ -1.65
NIFKP3-201ENST00000417799 OR8B3Q8NGG8 313 aa4.77□□□□□ -1.65
NIFKP3-201ENST00000417799 MRPL30Q8TCC3 161 aaKnown RBP4.77□□□□□ -1.65
NIFKP3-201ENST00000417799 COQ2Q96H96 371 aa4.77□□□□□ -1.65
NIFKP3-201ENST00000417799 OR8B2Q96RD0 313 aa4.77□□□□□ -1.65
NIFKP3-201ENST00000417799 HDHD3Q9BSH5 251 aaPredicted RBP4.77□□□□□ -1.65
NIFKP3-201ENST00000417799 CCDC32Q9BV29 185 aa4.77□□□□□ -1.65
NIFKP3-201ENST00000417799 ST6GALNAC5Q9BVH7 336 aa4.77□□□□□ -1.65
NIFKP3-201ENST00000417799 NCOR1P1Q9H4R4 102 aa4.77□□□□□ -1.65
NIFKP3-201ENST00000417799 NARFLQ9H6Q4 476 aa4.77□□□□□ -1.65
NIFKP3-201ENST00000417799 C12orf4Q9NQ89 552 aa4.77□□□□□ -1.65
NIFKP3-201ENST00000417799 CTSZQ9UBR2 303 aa4.77□□□□□ -1.65
NIFKP3-201ENST00000417799 KLK11Q9UBX7 282 aa4.77□□□□□ -1.65
NIFKP3-201ENST00000417799 MTFP1Q9UDX5 166 aa4.77□□□□□ -1.65
NIFKP3-201ENST00000417799 ZNF230Q9UIE0 474 aaPredicted RBP4.77□□□□□ -1.65
NIFKP3-201ENST00000417799 KIF25Q9UIL4 384 aa4.77□□□□□ -1.65
NIFKP3-201ENST00000417799 RNF150Q9ULK6 438 aa4.77□□□□□ -1.65
NIFKP3-201ENST00000417799 RBMX2Q9Y388 322 aaKnown RBP4.77□□□□□ -1.65
NIFKP3-201ENST00000417799 UNC79Q9P2D8 2635 aa4.77□□□□□ -1.65
NIFKP3-201ENST00000417799 NBPF19A0A087WUL8 3843 aa4.76□□□□□ -1.65
NIFKP3-201ENST00000417799 LRBAP50851 2863 aa4.76□□□□□ -1.65
NIFKP3-201ENST00000417799 MEIKINA0A087WXM9 373 aa4.76□□□□□ -1.65
NIFKP3-201ENST00000417799 TRAV39A0A0B4J263 110 aa4.76□□□□□ -1.65
NIFKP3-201ENST00000417799 hADV38S2A0JD32 116 aa4.76□□□□□ -1.65
NIFKP3-201ENST00000417799 ODAMA1E959 279 aa4.76□□□□□ -1.65
NIFKP3-201ENST00000417799 MEIS3P1A6NDR6 274 aa4.76□□□□□ -1.65
NIFKP3-201ENST00000417799 LANCL1O43813 399 aa4.76□□□□□ -1.65
NIFKP3-201ENST00000417799 FCN3O75636 299 aa4.76□□□□□ -1.65
NIFKP3-201ENST00000417799 UPK1BO75841 260 aa4.76□□□□□ -1.65
NIFKP3-201ENST00000417799 ECDO95905 644 aaPredicted RBP4.76□□□□□ -1.65
NIFKP3-201ENST00000417799 IGHV2-5P01817 119 aa4.76□□□□□ -1.65
NIFKP3-201ENST00000417799 FCGR3AP08637 254 aa4.76□□□□□ -1.65
NIFKP3-201ENST00000417799 GSTT2BP0CG30 244 aa4.76□□□□□ -1.65
NIFKP3-201ENST00000417799 IL7P13232 177 aa4.76□□□□□ -1.65
NIFKP3-201ENST00000417799 RCVRNP35243 200 aa4.76□□□□□ -1.65
NIFKP3-201ENST00000417799 FBN2P35556 2912 aa4.76□□□□□ -1.65
NIFKP3-201ENST00000417799 NPY4RP50391 375 aa4.76□□□□□ -1.65
NIFKP3-201ENST00000417799 EDDM3BP56851 147 aa4.76□□□□□ -1.65
NIFKP3-201ENST00000417799 ERVFC1-1P60608 527 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms