RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 M0R1X1 148 aa17.4■□□□□ 0.38
AP1S3-205ENST00000415298 NKX2-8O15522 239 aa17.4■□□□□ 0.38
AP1S3-205ENST00000415298 RBMXP38159 391 aaKnown RBP17.4■□□□□ 0.38
AP1S3-205ENST00000415298 OR52E2Q8NGJ4 325 aa17.4■□□□□ 0.38
AP1S3-205ENST00000415298 NPVFQ9HCQ7 196 aa17.4■□□□□ 0.38
AP1S3-205ENST00000415298 C20orf141Q9NUB4 165 aa17.4■□□□□ 0.38
AP1S3-205ENST00000415298 NCOR2Q9Y618 2525 aa17.4■□□□□ 0.38
AP1S3-205ENST00000415298 IL12BP29460 328 aa17.4■□□□□ 0.38
AP1S3-205ENST00000415298 HLA-DQA1Q5Y7H0 255 aa17.4■□□□□ 0.38
AP1S3-205ENST00000415298 LSRQ86X29 649 aaPredicted RBP17.4■□□□□ 0.38
AP1S3-205ENST00000415298 LINC00346Q8IVM7 164 aa17.4■□□□□ 0.38
AP1S3-205ENST00000415298 OR4K13Q8NH42 304 aa17.4■□□□□ 0.38
AP1S3-205ENST00000415298 PFN4Q8NHR9 129 aa17.4■□□□□ 0.38
AP1S3-205ENST00000415298 DPRXA6NFQ7 191 aa17.39■□□□□ 0.37
AP1S3-205ENST00000415298 ZFP92A6NM28 416 aa17.39■□□□□ 0.37
AP1S3-205ENST00000415298 GPX1P07203 203 aa17.39■□□□□ 0.37
AP1S3-205ENST00000415298 BVES-AS1Q5T3Y7 98 aa17.39■□□□□ 0.37
AP1S3-205ENST00000415298 LHFPL2Q6ZUX7 228 aa17.39■□□□□ 0.37
AP1S3-205ENST00000415298 ZNF441Q8N8Z8 693 aa17.39■□□□□ 0.37
AP1S3-205ENST00000415298 OR51A4Q8NGJ6 313 aa17.39■□□□□ 0.37
AP1S3-205ENST00000415298 SLC7A10Q9NS82 523 aa17.39■□□□□ 0.37
AP1S3-205ENST00000415298 WASHC3Q9Y3C0 194 aa17.39■□□□□ 0.37
AP1S3-205ENST00000415298 B9A039 149 aa17.39■□□□□ 0.37
AP1S3-205ENST00000415298 GUCA1AP43080 201 aaPredicted RBP17.39■□□□□ 0.37
AP1S3-205ENST00000415298 CEACAM21Q3KPI0 293 aa17.39■□□□□ 0.37
AP1S3-205ENST00000415298 CD300EQ496F6 205 aaPredicted RBP17.39■□□□□ 0.37
AP1S3-205ENST00000415298 RNFT1Q5M7Z0 435 aa17.39■□□□□ 0.37
AP1S3-205ENST00000415298 VAX1Q5SQQ9 334 aa17.39■□□□□ 0.37
AP1S3-205ENST00000415298 INO80CQ6PI98 192 aaPredicted RBP17.39■□□□□ 0.37
AP1S3-205ENST00000415298 BOD1L2Q8IYS8 172 aa17.39■□□□□ 0.37
AP1S3-205ENST00000415298 PLPP7Q8NBV4 271 aa17.39■□□□□ 0.37
AP1S3-205ENST00000415298 JPT1Q9UK76 154 aa17.39■□□□□ 0.37
AP1S3-205ENST00000415298 DUXBA0A1W2PPF3 345 aa17.38■□□□□ 0.37
AP1S3-205ENST00000415298 ARL3P36405 182 aa17.38■□□□□ 0.37
AP1S3-205ENST00000415298 OR4C3Q8NH37 302 aa17.38■□□□□ 0.37
AP1S3-205ENST00000415298 PRSS27Q9BQR3 290 aa17.38■□□□□ 0.37
AP1S3-205ENST00000415298 DEFB126Q9BYW3 111 aa17.38■□□□□ 0.37
AP1S3-205ENST00000415298 SRA1Q9HD15 236 aaKnown RBP17.38■□□□□ 0.37
AP1S3-205ENST00000415298 MSRB2Q9Y3D2 182 aa17.38■□□□□ 0.37
AP1S3-205ENST00000415298 WIPF3A6NGB9 483 aa17.38■□□□□ 0.37
AP1S3-205ENST00000415298 FRG2CA6NGY1 282 aa17.38■□□□□ 0.37
AP1S3-205ENST00000415298 TMEM212A6NML5 194 aa17.38■□□□□ 0.37
AP1S3-205ENST00000415298 CRISP2P16562 243 aa17.38■□□□□ 0.37
AP1S3-205ENST00000415298 GLYATL3Q5SZD4 288 aa17.38■□□□□ 0.37
AP1S3-205ENST00000415298 PSG8Q9UQ74 426 aa17.38■□□□□ 0.37
AP1S3-205ENST00000415298 IER3IP1Q9Y5U9 82 aa17.38■□□□□ 0.37
AP1S3-205ENST00000415298 TRAV27A0A087WT01 109 aa17.37■□□□□ 0.37
AP1S3-205ENST00000415298 ZFAND5O76080 213 aa17.37■□□□□ 0.37
AP1S3-205ENST00000415298 IL13RA2Q14627 380 aa17.37■□□□□ 0.37
AP1S3-205ENST00000415298 KIAA1644Q3SXP7 199 aa17.37■□□□□ 0.37
AP1S3-205ENST00000415298 SPIN3Q5JUX0 258 aa17.37■□□□□ 0.37
AP1S3-205ENST00000415298 BAGE3Q86Y29 109 aa17.37■□□□□ 0.37
AP1S3-205ENST00000415298 BAGE2Q86Y30 109 aa17.37■□□□□ 0.37
AP1S3-205ENST00000415298 FBXL14Q8N1E6 418 aa17.37■□□□□ 0.37
AP1S3-205ENST00000415298 SLC25A40Q8TBP6 338 aa17.37■□□□□ 0.37
AP1S3-205ENST00000415298 GNPNAT1Q96EK6 184 aaPredicted RBP17.37■□□□□ 0.37
AP1S3-205ENST00000415298 FAM103A1Q9BTL3 118 aaKnown RBP17.37■□□□□ 0.37
AP1S3-205ENST00000415298 CHRDL1Q9BU40 450 aa17.37■□□□□ 0.37
AP1S3-205ENST00000415298 LINC00470Q9BZP3 86 aa17.37■□□□□ 0.37
AP1S3-205ENST00000415298 WNT10AQ9GZT5 417 aa17.37■□□□□ 0.37
AP1S3-205ENST00000415298 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.37■□□□□ 0.37
AP1S3-205ENST00000415298 A0A0G2JMM0 328 aa17.37■□□□□ 0.37
AP1S3-205ENST00000415298 A0A1W2PPB8 328 aa17.37■□□□□ 0.37
AP1S3-205ENST00000415298 GAGE12HA6NDE8 117 aa17.37■□□□□ 0.37
AP1S3-205ENST00000415298 KIR3DP1A8MWS1 328 aa17.37■□□□□ 0.37
AP1S3-205ENST00000415298 ZNF732B4DXR9 585 aa17.37■□□□□ 0.37
AP1S3-205ENST00000415298 PMCHL1Q16048 86 aa17.37■□□□□ 0.37
AP1S3-205ENST00000415298 TMEM45BQ96B21 275 aa17.37■□□□□ 0.37
AP1S3-205ENST00000415298 MMP25Q9NPA2 562 aa17.37■□□□□ 0.37
AP1S3-205ENST00000415298 LRRC3CA6NJW4 275 aa17.36■□□□□ 0.37
AP1S3-205ENST00000415298 HS3ST1O14792 307 aa17.36■□□□□ 0.37
AP1S3-205ENST00000415298 KBTBD11O94819 623 aa17.36■□□□□ 0.37
AP1S3-205ENST00000415298 LHX2P50458 406 aa17.36■□□□□ 0.37
AP1S3-205ENST00000415298 YPEL3P61236 119 aaPredicted RBP17.36■□□□□ 0.37
AP1S3-205ENST00000415298 SLC18B1Q6NT16 456 aa17.36■□□□□ 0.37
AP1S3-205ENST00000415298 ZNF788Q6ZQV5 615 aa17.36■□□□□ 0.37
AP1S3-205ENST00000415298 NRN1Q9NPD7 142 aa17.36■□□□□ 0.37
AP1S3-205ENST00000415298 URB1O60287 2271 aaKnown RBP17.36■□□□□ 0.37
AP1S3-205ENST00000415298 H3BSH0 61 aa17.36■□□□□ 0.37
AP1S3-205ENST00000415298 SIVA1O15304 175 aa17.36■□□□□ 0.37
AP1S3-205ENST00000415298 XRCC2O43543 280 aa17.36■□□□□ 0.37
AP1S3-205ENST00000415298 GRPRP30550 384 aa17.36■□□□□ 0.37
AP1S3-205ENST00000415298 REPIN1Q9BWE0 567 aaKnown RBP17.36■□□□□ 0.37
AP1S3-205ENST00000415298 MUC21A0A0G2JKD1 596 aa17.35■□□□□ 0.37
AP1S3-205ENST00000415298 MUC21A0A140T8X8 626 aa17.35■□□□□ 0.37
AP1S3-205ENST00000415298 MPPED1O15442 326 aa17.35■□□□□ 0.37
AP1S3-205ENST00000415298 KLK10O43240 276 aa17.35■□□□□ 0.37
AP1S3-205ENST00000415298 TTRP02766 147 aa17.35■□□□□ 0.37
AP1S3-205ENST00000415298 SLC6A6P31641 620 aa17.35■□□□□ 0.37
AP1S3-205ENST00000415298 ASCL1P50553 236 aa17.35■□□□□ 0.37
AP1S3-205ENST00000415298 MUC21Q5SSG8 566 aa17.35■□□□□ 0.37
AP1S3-205ENST00000415298 C12orf54Q6X4T0 127 aa17.35■□□□□ 0.37
AP1S3-205ENST00000415298 TM2D1Q9BX74 207 aa17.35■□□□□ 0.37
AP1S3-205ENST00000415298 A0A1B0GTH9 108 aa17.35■□□□□ 0.37
AP1S3-205ENST00000415298 C17orf51A8MQB3 221 aa17.35■□□□□ 0.37
AP1S3-205ENST00000415298 SIRPB1O00241 398 aa17.35■□□□□ 0.37
AP1S3-205ENST00000415298 CNIH1O95406 144 aa17.35■□□□□ 0.37
AP1S3-205ENST00000415298 NUDT3O95989 172 aa17.35■□□□□ 0.37
AP1S3-205ENST00000415298 PIGPP57054 158 aa17.35■□□□□ 0.37
AP1S3-205ENST00000415298 PLCXD2Q0VAA5 305 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms