RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 RAMP1O60894 148 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 WISP2O76076 250 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 DUS4LO95620 317 aaKnown RBP2.94□□□□□ -1.94
SF3B1-203ENST00000414174 CGAP01215 116 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 WNT1P04628 370 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 SOD3P08294 240 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 SPINK8P0C7L1 97 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 IGLC6P0CF74 106 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 P0DMU3 169 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 FAM231AP0DMU4 169 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 FAM231CP0DMU5 169 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 FGF6P10767 208 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 FABP4P15090 132 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 CD1DP15813 335 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 RPS4Y1P22090 263 aaKnown RBP2.94□□□□□ -1.94
SF3B1-203ENST00000414174 CA6P23280 308 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 MPGP29372 298 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 PTGDSP41222 190 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 GUCA1AP43080 201 aaPredicted RBP2.94□□□□□ -1.94
SF3B1-203ENST00000414174 ZNF140P52738 457 aaPredicted RBP2.94□□□□□ -1.94
SF3B1-203ENST00000414174 APOC4P55056 127 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 H2BFSP57053 126 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 TAS2R46P59540 309 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 SLC35A1P78382 337 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 MYL5Q02045 173 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 POU3F1Q03052 451 aaPredicted RBP2.94□□□□□ -1.94
SF3B1-203ENST00000414174 ZNF92Q03936 586 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 PRDX1Q06830 199 aaKnown RBP2.94□□□□□ -1.94
SF3B1-203ENST00000414174 IL15RAQ13261 267 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 ZNF146Q15072 292 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 TMEM255AQ5JRV8 349 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 MEIG1Q5JSS6 88 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 TEDDM1Q5T9Z0 273 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 OLFML2AQ68BL7 652 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 PVRIGQ6DKI7 326 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 SLC35E4Q6ICL7 350 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 ZNF793Q6ZN11 406 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 Q6ZVH6 145 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 TCF23Q7RTU1 214 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 SGPP2Q8IWX5 399 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 TMEM183AQ8IXX5 376 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 PIANPQ8IYJ0 282 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 CIARTQ8N365 385 aaPredicted RBP2.94□□□□□ -1.94
SF3B1-203ENST00000414174 DEFB125Q8N687 156 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 LINC01465Q8N7H1 131 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 C9orf106Q8NAJ2 232 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 LINC00301Q8NCQ3 95 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 OR8B12Q8NGG6 310 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 OR5AK2Q8NH90 309 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 LMO3Q8TAP4 145 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 SLC25A46Q96AG3 418 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 LINC01587Q99440 93 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 SDF2Q99470 211 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 PKMYT1Q99640 499 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 PITX2Q99697 317 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 SPIN2AQ99865 258 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 SPIN2BQ9BPZ2 258 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 VAMP8Q9BV40 100 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 SFXN3Q9BWM7 321 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 SPRY4Q9C004 299 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 SLIRPQ9GZT3 109 aaKnown RBP2.94□□□□□ -1.94
SF3B1-203ENST00000414174 TMEM191AQ9H0A3 160 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 ATG5Q9H1Y0 275 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 OR51E2Q9H255 320 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 CA10Q9NS85 328 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 ASF1BQ9NVP2 202 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 TAAR2Q9P1P5 351 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 PLEKHB1Q9UF11 243 aaPredicted RBP2.94□□□□□ -1.94
SF3B1-203ENST00000414174 INSIG2Q9Y5U4 225 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 COL1A2P08123 1366 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 PLEKHH2Q8IVE3 1493 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 CDK12Q9NYV4 1490 aaPredicted RBP2.94□□□□□ -1.94
SF3B1-203ENST00000414174 KDM5CP41229 1560 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 ABCC2Q92887 1545 aa2.93□□□□□ -1.94
SF3B1-203ENST00000414174 SYCP2Q9BX26 1530 aa2.93□□□□□ -1.94
SF3B1-203ENST00000414174 ANKRD26Q9UPS8 1709 aa2.93□□□□□ -1.94
SF3B1-203ENST00000414174 CACNA1FO60840 1977 aa2.93□□□□□ -1.94
SF3B1-203ENST00000414174 MYH10P35580 1976 aa2.93□□□□□ -1.94
SF3B1-203ENST00000414174 CAMTA1Q9Y6Y1 1673 aa2.93□□□□□ -1.94
SF3B1-203ENST00000414174 DIP2AQ14689 1571 aa2.93□□□□□ -1.94
SF3B1-203ENST00000414174 REREQ9P2R6 1566 aa2.93□□□□□ -1.94
SF3B1-203ENST00000414174 A2ML1A8K2U0 1454 aa2.93□□□□□ -1.94
SF3B1-203ENST00000414174 ATP10BO94823 1461 aa2.93□□□□□ -1.94
SF3B1-203ENST00000414174 A0A1W2PP18 115 aa2.93□□□□□ -1.94
SF3B1-203ENST00000414174 C5orf49A4QMS7 147 aa2.93□□□□□ -1.94
SF3B1-203ENST00000414174 OR51F1A6NGY5 319 aa2.93□□□□□ -1.94
SF3B1-203ENST00000414174 FAM183AA6NL82 134 aa2.93□□□□□ -1.94
SF3B1-203ENST00000414174 ZNF705GA8MUZ8 300 aaPredicted RBP2.93□□□□□ -1.94
SF3B1-203ENST00000414174 ZNF670-ZNF695F2Z2N8 137 aa2.93□□□□□ -1.94
SF3B1-203ENST00000414174 H3BQ15 152 aa2.93□□□□□ -1.94
SF3B1-203ENST00000414174 LY6LH3BQJ8 138 aa2.93□□□□□ -1.94
SF3B1-203ENST00000414174 CDX4O14627 284 aaPredicted RBP2.93□□□□□ -1.94
SF3B1-203ENST00000414174 NPIPB7O75200 414 aa2.93□□□□□ -1.94
SF3B1-203ENST00000414174 NEURL1O76050 574 aa2.93□□□□□ -1.94
SF3B1-203ENST00000414174 DPM2O94777 84 aa2.93□□□□□ -1.94
SF3B1-203ENST00000414174 CXorf1O96002 111 aa2.93□□□□□ -1.94
SF3B1-203ENST00000414174 P01737 135 aa2.93□□□□□ -1.94
SF3B1-203ENST00000414174 ATP5G1P05496 136 aa2.93□□□□□ -1.94
SF3B1-203ENST00000414174 IGKV5-2P06315 115 aa2.93□□□□□ -1.94
SF3B1-203ENST00000414174 PGA5P0DJD9 388 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms