RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 RNF150Q9ULK6 438 aa7.29□□□□□ -1.24
SYNE1-211ENST00000413186 J3QRE1 110 aa7.29□□□□□ -1.24
SYNE1-211ENST00000413186 ROS1P08922 2347 aa7.29□□□□□ -1.24
SYNE1-211ENST00000413186 PRB4P10163 310 aaPredicted RBP7.29□□□□□ -1.24
SYNE1-211ENST00000413186 CRYGSP22914 178 aa7.29□□□□□ -1.24
SYNE1-211ENST00000413186 OR3A1P47881 315 aa7.29□□□□□ -1.24
SYNE1-211ENST00000413186 CD81P60033 236 aa7.29□□□□□ -1.24
SYNE1-211ENST00000413186 PSG7Q13046 419 aa7.29□□□□□ -1.24
SYNE1-211ENST00000413186 ZNF154Q13106 437 aa7.29□□□□□ -1.24
SYNE1-211ENST00000413186 UBE2V2Q15819 145 aa7.29□□□□□ -1.24
SYNE1-211ENST00000413186 Q6ZN92 141 aa7.29□□□□□ -1.24
SYNE1-211ENST00000413186 PCNPQ8WW12 178 aaKnown RBP7.29□□□□□ -1.24
SYNE1-211ENST00000413186 SLX1AQ9BQ83 275 aa7.29□□□□□ -1.24
SYNE1-211ENST00000413186 CHRDL1Q9BU40 450 aa7.29□□□□□ -1.24
SYNE1-211ENST00000413186 ANXA10Q9UJ72 324 aa7.29□□□□□ -1.24
SYNE1-211ENST00000413186 HSPB8Q9UJY1 196 aa7.29□□□□□ -1.24
SYNE1-211ENST00000413186 TMED3Q9Y3Q3 217 aa7.29□□□□□ -1.24
SYNE1-211ENST00000413186 SLC25A15Q9Y619 301 aa7.29□□□□□ -1.24
SYNE1-211ENST00000413186 FHITP49789 147 aa7.29□□□□□ -1.24
SYNE1-211ENST00000413186 OR4A47Q6IF82 309 aa7.29□□□□□ -1.24
SYNE1-211ENST00000413186 H2BFWTQ7Z2G1 175 aa7.29□□□□□ -1.24
SYNE1-211ENST00000413186 BAP18Q8IXM2 172 aa7.29□□□□□ -1.24
SYNE1-211ENST00000413186 PPP1R1CQ8WVI7 109 aa7.29□□□□□ -1.24
SYNE1-211ENST00000413186 SNX22Q96L94 193 aa7.29□□□□□ -1.24
SYNE1-211ENST00000413186 FAM234AQ9H0X4 552 aa7.29□□□□□ -1.24
SYNE1-211ENST00000413186 A0A1B0GTI1 187 aa7.29□□□□□ -1.24
SYNE1-211ENST00000413186 C17orf112F2Z3M2 114 aa7.29□□□□□ -1.24
SYNE1-211ENST00000413186 G3V3Q6 166 aa7.29□□□□□ -1.24
SYNE1-211ENST00000413186 ADH4P08319 380 aa7.29□□□□□ -1.24
SYNE1-211ENST00000413186 RPA2P15927 270 aa7.29□□□□□ -1.24
SYNE1-211ENST00000413186 CCL1P22362 96 aa7.29□□□□□ -1.24
SYNE1-211ENST00000413186 HERVK_113P61574 105 aa7.29□□□□□ -1.24
SYNE1-211ENST00000413186 ERASQ7Z444 233 aa7.29□□□□□ -1.24
SYNE1-211ENST00000413186 TEX29Q8N6K0 151 aa7.29□□□□□ -1.24
SYNE1-211ENST00000413186 MRGPRDQ8TDS7 321 aa7.29□□□□□ -1.24
SYNE1-211ENST00000413186 COPS9Q8WXC6 57 aa7.29□□□□□ -1.24
SYNE1-211ENST00000413186 PARD6GQ9BYG4 376 aaPredicted RBP7.29□□□□□ -1.24
SYNE1-211ENST00000413186 ZGRF1Q86YA3 2104 aa7.29□□□□□ -1.24
SYNE1-211ENST00000413186 LRP4O75096 1905 aa7.29□□□□□ -1.24
SYNE1-211ENST00000413186 DOCK10Q96BY6 2186 aa7.29□□□□□ -1.24
SYNE1-211ENST00000413186 ASPMQ8IZT6 3477 aa7.28□□□□□ -1.24
SYNE1-211ENST00000413186 IGHV1-18A0A0C4DH31 117 aa7.28□□□□□ -1.24
SYNE1-211ENST00000413186 IGHV1-69-2A0A0G2JMI3 117 aa7.28□□□□□ -1.24
SYNE1-211ENST00000413186 SLC17A3O00476 420 aa7.28□□□□□ -1.24
SYNE1-211ENST00000413186 FCGR3BO75015 233 aa7.28□□□□□ -1.24
SYNE1-211ENST00000413186 FCGR3AP08637 254 aa7.28□□□□□ -1.24
SYNE1-211ENST00000413186 CD80P33681 288 aa7.28□□□□□ -1.24
SYNE1-211ENST00000413186 CEACAM6P40199 344 aa7.28□□□□□ -1.24
SYNE1-211ENST00000413186 PDLIM4P50479 330 aa7.28□□□□□ -1.24
SYNE1-211ENST00000413186 PIGYQ3MUY2 71 aa7.28□□□□□ -1.24
SYNE1-211ENST00000413186 PRR30Q53SZ7 412 aaPredicted RBP7.28□□□□□ -1.24
SYNE1-211ENST00000413186 DGAT2L7PQ6IED9 249 aa7.28□□□□□ -1.24
SYNE1-211ENST00000413186 RFESDQ8TAC1 157 aa7.28□□□□□ -1.24
SYNE1-211ENST00000413186 ADTRPQ96IZ2 230 aa7.28□□□□□ -1.24
SYNE1-211ENST00000413186 MEGF10Q96KG7 1140 aa7.28□□□□□ -1.24
SYNE1-211ENST00000413186 WDR13Q9H1Z4 485 aa7.28□□□□□ -1.24
SYNE1-211ENST00000413186 TREM2Q9NZC2 230 aa7.28□□□□□ -1.24
SYNE1-211ENST00000413186 SLC25A10Q9UBX3 287 aaPredicted RBP7.28□□□□□ -1.24
SYNE1-211ENST00000413186 MED19A0JLT2 244 aaPredicted RBP7.28□□□□□ -1.24
SYNE1-211ENST00000413186 C9orf170A2RU37 121 aa7.28□□□□□ -1.24
SYNE1-211ENST00000413186 CTSDP07339 412 aaPredicted RBP7.28□□□□□ -1.24
SYNE1-211ENST00000413186 CELA3BP08861 270 aa7.28□□□□□ -1.24
SYNE1-211ENST00000413186 FABP2P12104 132 aa7.28□□□□□ -1.24
SYNE1-211ENST00000413186 MUC1P15941 1255 aaPredicted RBP7.28□□□□□ -1.24
SYNE1-211ENST00000413186 AADACP22760 399 aa7.28□□□□□ -1.24
SYNE1-211ENST00000413186 FOXG1P55316 489 aaPredicted RBP7.28□□□□□ -1.24
SYNE1-211ENST00000413186 ATP5J2P56134 94 aa7.28□□□□□ -1.24
SYNE1-211ENST00000413186 DLX1P56177 255 aa7.28□□□□□ -1.24
SYNE1-211ENST00000413186 ZNF90Q03938 601 aa7.28□□□□□ -1.24
SYNE1-211ENST00000413186 PRAMEF5Q5TYX0 476 aa7.28□□□□□ -1.24
SYNE1-211ENST00000413186 UQCC3Q6UW78 93 aa7.28□□□□□ -1.24
SYNE1-211ENST00000413186 SLC25A42Q86VD7 318 aa7.28□□□□□ -1.24
SYNE1-211ENST00000413186 MIEN1Q9BRT3 115 aa7.28□□□□□ -1.24
SYNE1-211ENST00000413186 RSPO3Q9BXY4 272 aaPredicted RBP7.28□□□□□ -1.24
SYNE1-211ENST00000413186 TAF9BQ9HBM6 251 aa7.28□□□□□ -1.24
SYNE1-211ENST00000413186 MT-ND6P03923 174 aa7.28□□□□□ -1.24
SYNE1-211ENST00000413186 COX6CP09669 75 aa7.28□□□□□ -1.24
SYNE1-211ENST00000413186 RPL31P62899 125 aaKnown RBP7.28□□□□□ -1.24
SYNE1-211ENST00000413186 FHL1Q13642 323 aa7.28□□□□□ -1.24
SYNE1-211ENST00000413186 DHRS7BQ6IAN0 325 aaPredicted RBP7.28□□□□□ -1.24
SYNE1-211ENST00000413186 OR1S2Q8NGQ3 325 aa7.28□□□□□ -1.24
SYNE1-211ENST00000413186 MRAP2Q96G30 205 aa7.28□□□□□ -1.24
SYNE1-211ENST00000413186 GSX1Q9H4S2 264 aaPredicted RBP7.28□□□□□ -1.24
SYNE1-211ENST00000413186 MIOXQ9UGB7 285 aa7.28□□□□□ -1.24
SYNE1-211ENST00000413186 HSF4Q9ULV5 492 aa7.28□□□□□ -1.24
SYNE1-211ENST00000413186 GAGE10A6NGK3 116 aa7.28□□□□□ -1.24
SYNE1-211ENST00000413186 CT45A10P0DMU9 189 aa7.28□□□□□ -1.24
SYNE1-211ENST00000413186 COX5AP20674 150 aa7.28□□□□□ -1.24
SYNE1-211ENST00000413186 S100A7L2Q5SY68 101 aa7.28□□□□□ -1.24
SYNE1-211ENST00000413186 OR10S1Q8NGN2 331 aa7.28□□□□□ -1.24
SYNE1-211ENST00000413186 RPEQ96AT9 228 aa7.28□□□□□ -1.24
SYNE1-211ENST00000413186 MARS2Q96GW9 593 aaKnown RBP7.28□□□□□ -1.24
SYNE1-211ENST00000413186 CCL19Q99731 98 aa7.28□□□□□ -1.24
SYNE1-211ENST00000413186 LPAR5Q9H1C0 372 aa7.28□□□□□ -1.24
SYNE1-211ENST00000413186 GHITMQ9H3K2 345 aa7.28□□□□□ -1.24
SYNE1-211ENST00000413186 MPDZO75970 2070 aa7.28□□□□□ -1.24
SYNE1-211ENST00000413186 C17orf100A8MU93 164 aa7.27□□□□□ -1.25
SYNE1-211ENST00000413186 PLAUP00749 431 aa7.27□□□□□ -1.25
SYNE1-211ENST00000413186 RPL12P30050 165 aaKnown RBP7.27□□□□□ -1.25
SYNE1-211ENST00000413186 HLA-DRB3P79483 266 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms