RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 CCSMST1Q4G0I0 132 aa6.43□□□□□ -1.38
PTPN3-203ENST00000412145 FBXW9Q5XUX1 488 aa6.43□□□□□ -1.38
PTPN3-203ENST00000412145 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.43□□□□□ -1.38
PTPN3-203ENST00000412145 TMEM179BQ7Z7N9 219 aa6.43□□□□□ -1.38
PTPN3-203ENST00000412145 OR4C13Q8NGP0 309 aa6.43□□□□□ -1.38
PTPN3-203ENST00000412145 OR13C6PQ8NH95 151 aa6.43□□□□□ -1.38
PTPN3-203ENST00000412145 WSB2Q9NYS7 404 aaPredicted RBP6.43□□□□□ -1.38
PTPN3-203ENST00000412145 SCN2AQ99250 2005 aa6.43□□□□□ -1.38
PTPN3-203ENST00000412145 hCG_38984A0A1B0GV85 526 aa6.43□□□□□ -1.38
PTPN3-203ENST00000412145 PTGDSP41222 190 aa6.43□□□□□ -1.38
PTPN3-203ENST00000412145 C21orf62-AS1Q17RA5 79 aa6.43□□□□□ -1.38
PTPN3-203ENST00000412145 FOXB2Q5VYV0 432 aa6.43□□□□□ -1.38
PTPN3-203ENST00000412145 CLEC2AQ6UVW9 174 aa6.43□□□□□ -1.38
PTPN3-203ENST00000412145 PCSK4Q6UW60 755 aa6.43□□□□□ -1.38
PTPN3-203ENST00000412145 IMMP2LQ96T52 175 aa6.43□□□□□ -1.38
PTPN3-203ENST00000412145 MSL2Q9HCI7 577 aa6.43□□□□□ -1.38
PTPN3-203ENST00000412145 SLC6A13Q9NSD5 602 aa6.43□□□□□ -1.38
PTPN3-203ENST00000412145 A0A1B0GWB2 263 aa6.43□□□□□ -1.38
PTPN3-203ENST00000412145 GDF9O60383 454 aa6.43□□□□□ -1.38
PTPN3-203ENST00000412145 ISG15P05161 165 aa6.43□□□□□ -1.38
PTPN3-203ENST00000412145 PRF1P14222 555 aa6.43□□□□□ -1.38
PTPN3-203ENST00000412145 RCC1P18754 421 aaPredicted RBP6.43□□□□□ -1.38
PTPN3-203ENST00000412145 FAM159AQ6UWV7 190 aa6.43□□□□□ -1.38
PTPN3-203ENST00000412145 TMEM86BQ8N661 226 aa6.43□□□□□ -1.38
PTPN3-203ENST00000412145 LRRC61Q9BV99 259 aa6.43□□□□□ -1.38
PTPN3-203ENST00000412145 NPIPB13A6NJU9 1138 aa6.42□□□□□ -1.38
PTPN3-203ENST00000412145 NPIPB4C9JG80 1138 aa6.42□□□□□ -1.38
PTPN3-203ENST00000412145 H7C2G1 150 aa6.42□□□□□ -1.38
PTPN3-203ENST00000412145 CD5P06127 495 aa6.42□□□□□ -1.38
PTPN3-203ENST00000412145 ATG4DQ86TL0 474 aaPredicted RBP6.42□□□□□ -1.38
PTPN3-203ENST00000412145 KCNS1Q96KK3 526 aa6.42□□□□□ -1.38
PTPN3-203ENST00000412145 AUP1Q9Y679 476 aa6.42□□□□□ -1.38
PTPN3-203ENST00000412145 A0A1B0GV90 55 aa6.42□□□□□ -1.38
PTPN3-203ENST00000412145 NKX2-6A6NCS4 301 aa6.42□□□□□ -1.38
PTPN3-203ENST00000412145 TSPAN2O60636 221 aa6.42□□□□□ -1.38
PTPN3-203ENST00000412145 FGF12P61328 243 aa6.42□□□□□ -1.38
PTPN3-203ENST00000412145 OTPQ5XKR4 325 aa6.42□□□□□ -1.38
PTPN3-203ENST00000412145 ZNF793Q6ZN11 406 aa6.42□□□□□ -1.38
PTPN3-203ENST00000412145 CXCL16Q9H2A7 254 aa6.42□□□□□ -1.38
PTPN3-203ENST00000412145 DPRXA6NFQ7 191 aa6.42□□□□□ -1.38
PTPN3-203ENST00000412145 C16orf97H3BN30 126 aa6.42□□□□□ -1.38
PTPN3-203ENST00000412145 GPR6P46095 362 aaPredicted RBP6.42□□□□□ -1.38
PTPN3-203ENST00000412145 CLDND2Q8NHS1 167 aa6.42□□□□□ -1.38
PTPN3-203ENST00000412145 GPR132Q9UNW8 380 aa6.42□□□□□ -1.38
PTPN3-203ENST00000412145 TNFRSF18Q9Y5U5 241 aa6.42□□□□□ -1.38
PTPN3-203ENST00000412145 LAMB2P55268 1798 aa6.42□□□□□ -1.38
PTPN3-203ENST00000412145 HOXA3O43365 443 aaPredicted RBP6.42□□□□□ -1.38
PTPN3-203ENST00000412145 LGALS1P09382 135 aaKnown RBP6.42□□□□□ -1.38
PTPN3-203ENST00000412145 CTLA4P16410 223 aa6.42□□□□□ -1.38
PTPN3-203ENST00000412145 FAM27BQ5VT28 67 aa6.42□□□□□ -1.38
PTPN3-203ENST00000412145 APC2O95996 2303 aa6.42□□□□□ -1.38
PTPN3-203ENST00000412145 PPIAL4EA0A075B759 164 aa6.42□□□□□ -1.38
PTPN3-203ENST00000412145 PPIAL4DF5H284 164 aa6.42□□□□□ -1.38
PTPN3-203ENST00000412145 PPIAL4FP0DN26 164 aa6.42□□□□□ -1.38
PTPN3-203ENST00000412145 ACSF3Q4G176 576 aaPredicted RBP6.42□□□□□ -1.38
PTPN3-203ENST00000412145 HIKESHIQ53FT3 197 aa6.42□□□□□ -1.38
PTPN3-203ENST00000412145 ANAPC13Q9BS18 74 aa6.42□□□□□ -1.38
PTPN3-203ENST00000412145 PPIAL4AQ9Y536 164 aa6.42□□□□□ -1.38
PTPN3-203ENST00000412145 C7orf71A4D174 169 aa6.42□□□□□ -1.38
PTPN3-203ENST00000412145 SELENOPP49908 381 aa6.42□□□□□ -1.38
PTPN3-203ENST00000412145 ATP5G2Q06055 141 aa6.42□□□□□ -1.38
PTPN3-203ENST00000412145 JPT1Q9UK76 154 aa6.42□□□□□ -1.38
PTPN3-203ENST00000412145 MT-CO3P00414 261 aa6.41□□□□□ -1.38
PTPN3-203ENST00000412145 GPX1P07203 203 aa6.41□□□□□ -1.38
PTPN3-203ENST00000412145 DANCRP0C864 163 aa6.41□□□□□ -1.38
PTPN3-203ENST00000412145 RHOGP84095 191 aa6.41□□□□□ -1.38
PTPN3-203ENST00000412145 LHX8Q68G74 356 aa6.41□□□□□ -1.38
PTPN3-203ENST00000412145 ZNF880Q6PDB4 577 aa6.41□□□□□ -1.38
PTPN3-203ENST00000412145 RBM38Q9H0Z9 239 aaKnown RBP6.41□□□□□ -1.38
PTPN3-203ENST00000412145 KIAA0100Q14667 2235 aaKnown RBP6.41□□□□□ -1.38
PTPN3-203ENST00000412145 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.41□□□□□ -1.38
PTPN3-203ENST00000412145 UPK2O00526 184 aa6.41□□□□□ -1.38
PTPN3-203ENST00000412145 CRPP02741 224 aa6.41□□□□□ -1.38
PTPN3-203ENST00000412145 FCGR3AP08637 254 aa6.41□□□□□ -1.38
PTPN3-203ENST00000412145 TAF15Q92804 592 aaKnown RBP eCLIP6.41□□□□□ -1.38
PTPN3-203ENST00000412145 PIMREGQ9BSJ6 248 aa6.41□□□□□ -1.38
PTPN3-203ENST00000412145 MFRPQ9BY79 579 aa6.41□□□□□ -1.38
PTPN3-203ENST00000412145 FOXJ2Q9P0K8 574 aa6.41□□□□□ -1.38
PTPN3-203ENST00000412145 IGHV3-15A0A0B4J1V0 119 aa6.41□□□□□ -1.38
PTPN3-203ENST00000412145 MPZL1O95297 269 aa6.41□□□□□ -1.38
PTPN3-203ENST00000412145 HAPLN4Q86UW8 402 aa6.41□□□□□ -1.38
PTPN3-203ENST00000412145 RFESDQ8TAC1 157 aa6.41□□□□□ -1.38
PTPN3-203ENST00000412145 GP6Q9HCN6 339 aa6.41□□□□□ -1.38
PTPN3-203ENST00000412145 TNFRSF19Q9NS68 423 aa6.41□□□□□ -1.38
PTPN3-203ENST00000412145 PCOLCE2Q9UKZ9 415 aa6.41□□□□□ -1.38
PTPN3-203ENST00000412145 IRF3Q14653 427 aa6.41□□□□□ -1.38
PTPN3-203ENST00000412145 ATXN8Q156A1 80 aa6.41□□□□□ -1.38
PTPN3-203ENST00000412145 ECSCRQ19T08 205 aa6.41□□□□□ -1.38
PTPN3-203ENST00000412145 ORMDL2Q53FV1 153 aa6.41□□□□□ -1.38
PTPN3-203ENST00000412145 RNF182Q8N6D2 247 aa6.41□□□□□ -1.38
PTPN3-203ENST00000412145 CHD5Q8TDI0 1954 aa6.41□□□□□ -1.38
PTPN3-203ENST00000412145 TRBV7-9A0A0J9YWB2 115 aa6.41□□□□□ -1.38
PTPN3-203ENST00000412145 C2CD4DB7Z1M9 353 aa6.41□□□□□ -1.38
PTPN3-203ENST00000412145 CA1P00915 261 aaPredicted RBP6.41□□□□□ -1.38
PTPN3-203ENST00000412145 ZNF56Q15929 161 aa6.41□□□□□ -1.38
PTPN3-203ENST00000412145 FAM27D1Q5T7N8 215 aa6.41□□□□□ -1.38
PTPN3-203ENST00000412145 MORN3Q6PF18 240 aaPredicted RBP6.41□□□□□ -1.38
PTPN3-203ENST00000412145 C8orf44Q96CB5 159 aa6.41□□□□□ -1.38
PTPN3-203ENST00000412145 MIXL1Q9H2W2 232 aa6.41□□□□□ -1.38
PTPN3-203ENST00000412145 CEACAM4O75871 244 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms