RNA–Protein interactions for RNA: ENST00000411819.1

MSH6-202, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 548 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-202ENST00000411819 FABP5Q01469 135 aa17.35■□□□□ 0.37
MSH6-202ENST00000411819 PRSS48Q7RTY5 328 aa17.35■□□□□ 0.37
MSH6-202ENST00000411819 MINDY2Q8NBR6 621 aa17.35■□□□□ 0.37
MSH6-202ENST00000411819 OR56B1Q8NGI3 324 aa17.35■□□□□ 0.37
MSH6-202ENST00000411819 FAM3DQ96BQ1 224 aa17.35■□□□□ 0.37
MSH6-202ENST00000411819 GHITMQ9H3K2 345 aa17.35■□□□□ 0.37
MSH6-202ENST00000411819 RNF150Q9ULK6 438 aa17.35■□□□□ 0.37
MSH6-202ENST00000411819 COL7A1Q02388 2944 aa17.34■□□□□ 0.37
MSH6-202ENST00000411819 DENRO43583 198 aaKnown RBP17.34■□□□□ 0.37
MSH6-202ENST00000411819 TMEM50BP56557 158 aa17.34■□□□□ 0.37
MSH6-202ENST00000411819 MRPS15P82914 257 aaKnown RBP17.34■□□□□ 0.37
MSH6-202ENST00000411819 RUNX1Q01196 453 aa17.34■□□□□ 0.37
MSH6-202ENST00000411819 KIAA0141Q14154 515 aaPredicted RBP17.34■□□□□ 0.37
MSH6-202ENST00000411819 HES5Q5TA89 166 aa17.34■□□□□ 0.37
MSH6-202ENST00000411819 ASPHD1Q5U4P2 390 aa17.34■□□□□ 0.37
MSH6-202ENST00000411819 ZNF660Q6AZW8 331 aaPredicted RBP17.34■□□□□ 0.37
MSH6-202ENST00000411819 DRAXINQ8NBI3 349 aaPredicted RBP17.34■□□□□ 0.37
MSH6-202ENST00000411819 OR5AN1Q8NGI8 311 aa17.34■□□□□ 0.37
MSH6-202ENST00000411819 CASTOR1Q8WTX7 329 aa17.34■□□□□ 0.37
MSH6-202ENST00000411819 CLCC1Q96S66 551 aa17.34■□□□□ 0.37
MSH6-202ENST00000411819 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.34■□□□□ 0.37
MSH6-202ENST00000411819 SCOCQ9UIL1 159 aa17.34■□□□□ 0.37
MSH6-202ENST00000411819 ZNF221Q9UK13 617 aa17.34■□□□□ 0.37
MSH6-202ENST00000411819 FOXA2Q9Y261 457 aaPredicted RBP17.34■□□□□ 0.37
MSH6-202ENST00000411819 V9GY05 133 aa17.34■□□□□ 0.37
MSH6-202ENST00000411819 LY86O95711 162 aa17.33■□□□□ 0.36
MSH6-202ENST00000411819 C2orf76Q3KRA6 126 aa17.33■□□□□ 0.36
MSH6-202ENST00000411819 TCTEX1D1Q8N7M0 179 aa17.33■□□□□ 0.36
MSH6-202ENST00000411819 FAM103A1Q9BTL3 118 aaKnown RBP17.33■□□□□ 0.36
MSH6-202ENST00000411819 ALX4Q9H161 411 aaPredicted RBP17.33■□□□□ 0.36
MSH6-202ENST00000411819 VCX3BQ9H321 246 aa17.33■□□□□ 0.36
MSH6-202ENST00000411819 ACOT13Q9NPJ3 140 aa17.33■□□□□ 0.36
MSH6-202ENST00000411819 METTL1Q9UBP6 276 aaKnown RBP17.33■□□□□ 0.36
MSH6-202ENST00000411819 FCN1O00602 326 aa17.32■□□□□ 0.36
MSH6-202ENST00000411819 SOX15O60248 233 aa17.32■□□□□ 0.36
MSH6-202ENST00000411819 RANBP1P43487 201 aa17.32■□□□□ 0.36
MSH6-202ENST00000411819 CRIP2P52943 208 aaPredicted RBP17.32■□□□□ 0.36
MSH6-202ENST00000411819 TMEM267Q0VDI3 215 aaPredicted RBP17.32■□□□□ 0.36
MSH6-202ENST00000411819 C19orf54Q5BKX5 351 aa17.32■□□□□ 0.36
MSH6-202ENST00000411819 PLAC9Q5JTB6 97 aa17.32■□□□□ 0.36
MSH6-202ENST00000411819 IZUMO2Q6UXV1 221 aa17.32■□□□□ 0.36
MSH6-202ENST00000411819 CNBD2Q96M20 576 aa17.32■□□□□ 0.36
MSH6-202ENST00000411819 RDH8Q9NYR8 311 aa17.32■□□□□ 0.36
MSH6-202ENST00000411819 GAB2Q9UQC2 676 aa17.32■□□□□ 0.36
MSH6-202ENST00000411819 ZNF256Q9Y2P7 627 aaPredicted RBP17.32■□□□□ 0.36
MSH6-202ENST00000411819 IGKV1-6A0A0C4DH72 117 aa17.31■□□□□ 0.36
MSH6-202ENST00000411819 TMEM272A0A1B0GTI8 110 aa17.31■□□□□ 0.36
MSH6-202ENST00000411819 TRDCB7Z8K6 153 aa17.31■□□□□ 0.36
MSH6-202ENST00000411819 APOA2P02652 100 aa17.31■□□□□ 0.36
MSH6-202ENST00000411819 CD3GP09693 182 aa17.31■□□□□ 0.36
MSH6-202ENST00000411819 PSMD7P51665 324 aa17.31■□□□□ 0.36
MSH6-202ENST00000411819 PLA2G7Q13093 441 aa17.31■□□□□ 0.36
MSH6-202ENST00000411819 TBCEQ15813 527 aaPredicted RBP17.31■□□□□ 0.36
MSH6-202ENST00000411819 UNQ5815/PRO19632Q6UWF5 114 aa17.31■□□□□ 0.36
MSH6-202ENST00000411819 PPP1R27Q86WC6 154 aa17.31■□□□□ 0.36
MSH6-202ENST00000411819 DCUN1D4Q92564 292 aa17.31■□□□□ 0.36
MSH6-202ENST00000411819 PTX4Q96A99 478 aa17.31■□□□□ 0.36
MSH6-202ENST00000411819 OVOL1O14753 267 aa17.3■□□□□ 0.36
MSH6-202ENST00000411819 CA2P00918 260 aa17.3■□□□□ 0.36
MSH6-202ENST00000411819 IGKV1-16P04430 117 aa17.3■□□□□ 0.36
MSH6-202ENST00000411819 TFAP2AP05549 437 aa17.3■□□□□ 0.36
MSH6-202ENST00000411819 INSL3P51460 131 aa17.3■□□□□ 0.36
MSH6-202ENST00000411819 RPS16P62249 146 aaKnown RBP17.3■□□□□ 0.36
MSH6-202ENST00000411819 PSG5Q15238 335 aa17.3■□□□□ 0.36
MSH6-202ENST00000411819 ACTBL2Q562R1 376 aa17.3■□□□□ 0.36
MSH6-202ENST00000411819 ZNF367Q7RTV3 350 aa17.3■□□□□ 0.36
MSH6-202ENST00000411819 RAB3CQ96E17 227 aa17.3■□□□□ 0.36
MSH6-202ENST00000411819 WWC2-AS2Q96NR7 200 aa17.3■□□□□ 0.36
MSH6-202ENST00000411819 TSNAXQ99598 290 aaKnown RBP17.3■□□□□ 0.36
MSH6-202ENST00000411819 RNF5Q99942 180 aa17.3■□□□□ 0.36
MSH6-202ENST00000411819 BLOC1S6Q9UL45 172 aa17.3■□□□□ 0.36
MSH6-202ENST00000411819 LSM4Q9Y4Z0 139 aaKnown RBP17.3■□□□□ 0.36
MSH6-202ENST00000411819 LINC01619G3V211 115 aa17.29■□□□□ 0.36
MSH6-202ENST00000411819 M0R1X1 148 aa17.29■□□□□ 0.36
MSH6-202ENST00000411819 PDCD5O14737 125 aa17.29■□□□□ 0.36
MSH6-202ENST00000411819 BET1O15155 118 aa17.29■□□□□ 0.36
MSH6-202ENST00000411819 LDLRAD4O15165 306 aa17.29■□□□□ 0.36
MSH6-202ENST00000411819 PROP1O75360 226 aa17.29■□□□□ 0.36
MSH6-202ENST00000411819 LGALS1P09382 135 aaKnown RBP17.29■□□□□ 0.36
MSH6-202ENST00000411819 HSPA13P48723 471 aa17.29■□□□□ 0.36
MSH6-202ENST00000411819 SLURP1P55000 103 aa17.29■□□□□ 0.36
MSH6-202ENST00000411819 LINC00205P59089 165 aa17.29■□□□□ 0.36
MSH6-202ENST00000411819 PYHIN1Q6K0P9 492 aa17.29■□□□□ 0.36
MSH6-202ENST00000411819 PDPNQ86YL7 162 aa17.29■□□□□ 0.36
MSH6-202ENST00000411819 ZNF383Q8NA42 475 aa17.29■□□□□ 0.36
MSH6-202ENST00000411819 OR4A4PQ8NGN8 299 aa17.29■□□□□ 0.36
MSH6-202ENST00000411819 RAB22AQ9UL26 194 aa17.29■□□□□ 0.36
MSH6-202ENST00000411819 NUBP2Q9Y5Y2 271 aa17.29■□□□□ 0.36
MSH6-202ENST00000411819 A0A075B6Q4 140 aa17.28■□□□□ 0.36
MSH6-202ENST00000411819 FABP7O15540 132 aa17.28■□□□□ 0.36
MSH6-202ENST00000411819 SAP30O75446 220 aa17.28■□□□□ 0.36
MSH6-202ENST00000411819 SPDEFO95238 335 aa17.28■□□□□ 0.36
MSH6-202ENST00000411819 IGHV3-11P01762 117 aa17.28■□□□□ 0.36
MSH6-202ENST00000411819 EGR2P11161 476 aaPredicted RBP17.28■□□□□ 0.36
MSH6-202ENST00000411819 SNRPBP14678 240 aaKnown RBP17.28■□□□□ 0.36
MSH6-202ENST00000411819 GADD45AP24522 165 aa17.28■□□□□ 0.36
MSH6-202ENST00000411819 MYL9P24844 172 aa17.28■□□□□ 0.36
MSH6-202ENST00000411819 OR10A3P58181 314 aa17.28■□□□□ 0.36
MSH6-202ENST00000411819 TPPP2P59282 170 aa17.28■□□□□ 0.36
MSH6-202ENST00000411819 SSX1Q16384 188 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms