RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 TMEM38BQ9NVV0 291 aa13.09□□□□□ -0.31
LIMS2-205ENST00000409455 LRP5LA4QPB2 252 aa13.09□□□□□ -0.31
LIMS2-205ENST00000409455 PCP4P48539 62 aa13.09□□□□□ -0.31
LIMS2-205ENST00000409455 RPL15P61313 204 aaKnown RBP13.09□□□□□ -0.31
LIMS2-205ENST00000409455 KRTAP27-1Q3LI81 207 aa13.09□□□□□ -0.31
LIMS2-205ENST00000409455 OR8G2PQ6IF36 304 aa13.09□□□□□ -0.31
LIMS2-205ENST00000409455 SH2D2AQ9NP31 389 aa13.09□□□□□ -0.31
LIMS2-205ENST00000409455 PCSK5Q92824 1860 aa13.09□□□□□ -0.31
LIMS2-205ENST00000409455 C21orf140B9A014 251 aa13.08□□□□□ -0.32
LIMS2-205ENST00000409455 IRF2P14316 349 aa13.08□□□□□ -0.32
LIMS2-205ENST00000409455 UBE2NP61088 152 aaKnown RBP13.08□□□□□ -0.32
LIMS2-205ENST00000409455 PSG4Q00888 419 aa13.08□□□□□ -0.32
LIMS2-205ENST00000409455 PCSK4Q6UW60 755 aa13.08□□□□□ -0.32
LIMS2-205ENST00000409455 CMTM2Q8TAZ6 248 aa13.08□□□□□ -0.32
LIMS2-205ENST00000409455 MIEN1Q9BRT3 115 aa13.08□□□□□ -0.32
LIMS2-205ENST00000409455 ERRFI1Q9UJM3 462 aaPredicted RBP13.08□□□□□ -0.32
LIMS2-205ENST00000409455 PXMP4Q9Y6I8 212 aa13.08□□□□□ -0.32
LIMS2-205ENST00000409455 LILRA1O75019 489 aa13.08□□□□□ -0.32
LIMS2-205ENST00000409455 SERPINA7P05543 415 aa13.08□□□□□ -0.32
LIMS2-205ENST00000409455 FTH1P19P0C7X4 201 aa13.08□□□□□ -0.32
LIMS2-205ENST00000409455 CD99P14209 185 aa13.08□□□□□ -0.32
LIMS2-205ENST00000409455 GCH1P30793 250 aa13.08□□□□□ -0.32
LIMS2-205ENST00000409455 ACSM6Q6P461 480 aa13.08□□□□□ -0.32
LIMS2-205ENST00000409455 OR10G9Q8NGN4 311 aa13.08□□□□□ -0.32
LIMS2-205ENST00000409455 OR10G7Q8NGN6 311 aa13.08□□□□□ -0.32
LIMS2-205ENST00000409455 GATAD1Q8WUU5 269 aa13.08□□□□□ -0.32
LIMS2-205ENST00000409455 PSMF1Q92530 271 aa13.08□□□□□ -0.32
LIMS2-205ENST00000409455 WDYHV1Q96HA8 205 aa13.08□□□□□ -0.32
LIMS2-205ENST00000409455 C20orf144Q9BQM9 153 aa13.08□□□□□ -0.32
LIMS2-205ENST00000409455 RIMS4Q9H426 269 aaPredicted RBP13.08□□□□□ -0.32
LIMS2-205ENST00000409455 MRPS18CQ9Y3D5 142 aaKnown RBP13.08□□□□□ -0.32
LIMS2-205ENST00000409455 RIF1Q5UIP0 2472 aaKnown RBP13.08□□□□□ -0.32
LIMS2-205ENST00000409455 TNFSF11O14788 317 aa13.07□□□□□ -0.32
LIMS2-205ENST00000409455 IGKV1-39P01597 117 aa13.07□□□□□ -0.32
LIMS2-205ENST00000409455 IGKV1D-39P04432 117 aa13.07□□□□□ -0.32
LIMS2-205ENST00000409455 TMEM183BQ1AE95 376 aa13.07□□□□□ -0.32
LIMS2-205ENST00000409455 ZNF324BQ6AW86 544 aaPredicted RBP13.07□□□□□ -0.32
LIMS2-205ENST00000409455 ALKBH3Q96Q83 286 aaPredicted RBP13.07□□□□□ -0.32
LIMS2-205ENST00000409455 LPAR2Q9HBW0 351 aa13.07□□□□□ -0.32
LIMS2-205ENST00000409455 PLA2G3Q9NZ20 509 aa13.07□□□□□ -0.32
LIMS2-205ENST00000409455 A0A1B0GUS0 222 aa13.07□□□□□ -0.32
LIMS2-205ENST00000409455 PAGE4O60829 102 aa13.07□□□□□ -0.32
LIMS2-205ENST00000409455 IGKV1-5P01602 117 aa13.07□□□□□ -0.32
LIMS2-205ENST00000409455 RANP62826 216 aaKnown RBP13.07□□□□□ -0.32
LIMS2-205ENST00000409455 ARSJQ5FYB0 599 aaPredicted RBP13.07□□□□□ -0.32
LIMS2-205ENST00000409455 OR2H1Q9GZK4 316 aa13.07□□□□□ -0.32
LIMS2-205ENST00000409455 TMEM106BQ9NUM4 274 aa13.07□□□□□ -0.32
LIMS2-205ENST00000409455 CNOT1A5YKK6 2376 aaKnown RBP13.07□□□□□ -0.32
LIMS2-205ENST00000409455 TNFSF13O75888 250 aa13.06□□□□□ -0.32
LIMS2-205ENST00000409455 WNT2P09544 360 aa13.06□□□□□ -0.32
LIMS2-205ENST00000409455 BRS3P32247 399 aa13.06□□□□□ -0.32
LIMS2-205ENST00000409455 CPT1CQ8TCG5 803 aa13.06□□□□□ -0.32
LIMS2-205ENST00000409455 SGCZQ96LD1 299 aa13.06□□□□□ -0.32
LIMS2-205ENST00000409455 OPN3Q9H1Y3 402 aaPredicted RBP13.06□□□□□ -0.32
LIMS2-205ENST00000409455 IL36RNQ9UBH0 155 aa13.06□□□□□ -0.32
LIMS2-205ENST00000409455 ZFHX2Q9C0A1 2572 aaPredicted RBP13.06□□□□□ -0.32
LIMS2-205ENST00000409455 C11orf94C9JXX5 98 aa13.06□□□□□ -0.32
LIMS2-205ENST00000409455 MLNRO43193 412 aa13.06□□□□□ -0.32
LIMS2-205ENST00000409455 CLDN1O95832 211 aa13.06□□□□□ -0.32
LIMS2-205ENST00000409455 EDN3P14138 238 aa13.06□□□□□ -0.32
LIMS2-205ENST00000409455 TPPP2P59282 170 aa13.06□□□□□ -0.32
LIMS2-205ENST00000409455 PCBD1P61457 104 aa13.06□□□□□ -0.32
LIMS2-205ENST00000409455 TMEM144Q7Z5S9 345 aa13.06□□□□□ -0.32
LIMS2-205ENST00000409455 LINC01551Q86U37 167 aa13.06□□□□□ -0.32
LIMS2-205ENST00000409455 SAXO1Q8IYX7 474 aa13.06□□□□□ -0.32
LIMS2-205ENST00000409455 HS3ST6Q96QI5 342 aa13.06□□□□□ -0.32
LIMS2-205ENST00000409455 WNT5BQ9H1J7 359 aa13.06□□□□□ -0.32
LIMS2-205ENST00000409455 LIN7CQ9NUP9 197 aaKnown RBP13.06□□□□□ -0.32
LIMS2-205ENST00000409455 C1QTNF9BB2RNN3 333 aa13.05□□□□□ -0.32
LIMS2-205ENST00000409455 TRAPPC2LH3BP13 241 aa13.05□□□□□ -0.32
LIMS2-205ENST00000409455 NUPR1O60356 82 aa13.05□□□□□ -0.32
LIMS2-205ENST00000409455 ZNF16P17020 682 aaPredicted RBP13.05□□□□□ -0.32
LIMS2-205ENST00000409455 COX5AP20674 150 aa13.05□□□□□ -0.32
LIMS2-205ENST00000409455 TNFSF10P50591 281 aa13.05□□□□□ -0.32
LIMS2-205ENST00000409455 GPM6AP51674 278 aa13.05□□□□□ -0.32
LIMS2-205ENST00000409455 MRPS11P82912 194 aaKnown RBP13.05□□□□□ -0.32
LIMS2-205ENST00000409455 BATFQ16520 125 aa13.05□□□□□ -0.32
LIMS2-205ENST00000409455 TEX43Q6ZNM6 134 aa13.05□□□□□ -0.32
LIMS2-205ENST00000409455 LRP11Q86VZ4 500 aa13.05□□□□□ -0.32
LIMS2-205ENST00000409455 IL1F10Q8WWZ1 152 aa13.05□□□□□ -0.32
LIMS2-205ENST00000409455 DIRC2Q96SL1 478 aa13.05□□□□□ -0.32
LIMS2-205ENST00000409455 LRFN3Q9BTN0 628 aa13.05□□□□□ -0.32
LIMS2-205ENST00000409455 GPR35Q9HC97 309 aa13.05□□□□□ -0.32
LIMS2-205ENST00000409455 ASPMQ8IZT6 3477 aa13.05□□□□□ -0.32
LIMS2-205ENST00000409455 LIFP15018 202 aa13.05□□□□□ -0.32
LIMS2-205ENST00000409455 PAFAH1B2P68402 229 aa13.05□□□□□ -0.32
LIMS2-205ENST00000409455 FFAR4Q5NUL3 377 aa13.05□□□□□ -0.32
LIMS2-205ENST00000409455 TMEM14EPQ6UXP3 125 aa13.05□□□□□ -0.32
LIMS2-205ENST00000409455 SPSB4Q96A44 273 aa13.05□□□□□ -0.32
LIMS2-205ENST00000409455 FOXB1Q99853 325 aa13.05□□□□□ -0.32
LIMS2-205ENST00000409455 SF3B5Q9BWJ5 86 aaKnown RBP13.05□□□□□ -0.32
LIMS2-205ENST00000409455 RYDENQ9NUL5 291 aaKnown RBP13.05□□□□□ -0.32
LIMS2-205ENST00000409455 FAM90A26D6RGX4 464 aa13.04□□□□□ -0.32
LIMS2-205ENST00000409455 ZIC3O60481 467 aa13.04□□□□□ -0.32
LIMS2-205ENST00000409455 DSCR4P56555 118 aaPredicted RBP13.04□□□□□ -0.32
LIMS2-205ENST00000409455 SOX8P57073 446 aa13.04□□□□□ -0.32
LIMS2-205ENST00000409455 FOXL1Q12952 345 aa13.04□□□□□ -0.32
LIMS2-205ENST00000409455 C20orf204Q6ZNR8 217 aa13.04□□□□□ -0.32
LIMS2-205ENST00000409455 VAMP8Q9BV40 100 aa13.04□□□□□ -0.32
LIMS2-205ENST00000409455 TMEM147Q9BVK8 224 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms