RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 NDUFB6O95139 128 aa16.57■□□□□ 0.24
VSX1-203ENST00000409285 TUSC1Q2TAM9 212 aa16.57■□□□□ 0.24
VSX1-203ENST00000409285 TPTE2P1Q5T6R2 138 aa16.57■□□□□ 0.24
VSX1-203ENST00000409285 RUSC1-AS1Q66K80 236 aa16.57■□□□□ 0.24
VSX1-203ENST00000409285 Q71RC1 249 aaPredicted RBP16.57■□□□□ 0.24
VSX1-203ENST00000409285 LHFPL4Q7Z7J7 247 aa16.57■□□□□ 0.24
VSX1-203ENST00000409285 DRAM1Q8N682 238 aa16.57■□□□□ 0.24
VSX1-203ENST00000409285 SCGB3A2Q96PL1 93 aa16.57■□□□□ 0.24
VSX1-203ENST00000409285 COPZ2Q9P299 210 aa16.57■□□□□ 0.24
VSX1-203ENST00000409285 RNF150Q9ULK6 438 aa16.57■□□□□ 0.24
VSX1-203ENST00000409285 HSD17B6O14756 317 aa16.56■□□□□ 0.24
VSX1-203ENST00000409285 PROP1O75360 226 aa16.56■□□□□ 0.24
VSX1-203ENST00000409285 EPHA1P21709 976 aa16.56■□□□□ 0.24
VSX1-203ENST00000409285 CCR6P51684 374 aa16.56■□□□□ 0.24
VSX1-203ENST00000409285 EIF4EBP1Q13541 118 aaPredicted RBP16.56■□□□□ 0.24
VSX1-203ENST00000409285 ZNF818PQ6ZRF7 136 aa16.56■□□□□ 0.24
VSX1-203ENST00000409285 ZDHHC22Q8N966 263 aa16.56■□□□□ 0.24
VSX1-203ENST00000409285 ZFAND1Q8TCF1 268 aa16.56■□□□□ 0.24
VSX1-203ENST00000409285 MARCH1Q8TCQ1 289 aa16.56■□□□□ 0.24
VSX1-203ENST00000409285 RTN4IP1Q8WWV3 396 aaPredicted RBP16.56■□□□□ 0.24
VSX1-203ENST00000409285 C5orf30Q96GV9 206 aa16.56■□□□□ 0.24
VSX1-203ENST00000409285 CDC42EP3Q9UKI2 254 aa16.56■□□□□ 0.24
VSX1-203ENST00000409285 SETD2Q9BYW2 2564 aaPredicted RBP16.56■□□□□ 0.24
VSX1-203ENST00000409285 IGHV3OR16-10A0A075B7F0 116 aa16.55■□□□□ 0.24
VSX1-203ENST00000409285 A0A1W2PRD5 423 aa16.55■□□□□ 0.24
VSX1-203ENST00000409285 A0A1W2PRF3 423 aa16.55■□□□□ 0.24
VSX1-203ENST00000409285 A0A1W2PRM7 423 aa16.55■□□□□ 0.24
VSX1-203ENST00000409285 GPR31O00270 319 aa16.55■□□□□ 0.24
VSX1-203ENST00000409285 CCDC144NLQ6NUI1 221 aa16.55■□□□□ 0.24
VSX1-203ENST00000409285 RPEQ96AT9 228 aa16.55■□□□□ 0.24
VSX1-203ENST00000409285 DPAGT1Q9H3H5 408 aa16.55■□□□□ 0.24
VSX1-203ENST00000409285 CCL28Q9NRJ3 127 aa16.55■□□□□ 0.24
VSX1-203ENST00000409285 GPR132Q9UNW8 380 aa16.55■□□□□ 0.24
VSX1-203ENST00000409285 GAPDHP04406 335 aaKnown RBP16.54■□□□□ 0.24
VSX1-203ENST00000409285 CTSDP07339 412 aaPredicted RBP16.54■□□□□ 0.24
VSX1-203ENST00000409285 RND3P61587 244 aa16.54■□□□□ 0.24
VSX1-203ENST00000409285 HABP2Q14520 560 aaPredicted RBP16.54■□□□□ 0.24
VSX1-203ENST00000409285 RPL39P5Q59GN2 51 aa16.54■□□□□ 0.24
VSX1-203ENST00000409285 TGIF2LXQ8IUE1 241 aa16.54■□□□□ 0.24
VSX1-203ENST00000409285 CMTM1Q8IZ96 169 aa16.54■□□□□ 0.24
VSX1-203ENST00000409285 OR8H3Q8N146 312 aa16.54■□□□□ 0.24
VSX1-203ENST00000409285 C5orf66Q9H5L9 145 aa16.54■□□□□ 0.24
VSX1-203ENST00000409285 A0A0U1RQK1 487 aa16.54■□□□□ 0.24
VSX1-203ENST00000409285 FAM240BA0A1B0GVZ2 78 aa16.54■□□□□ 0.24
VSX1-203ENST00000409285 A0A1W2PPI3 338 aa16.54■□□□□ 0.24
VSX1-203ENST00000409285 PTTG1O95997 202 aa16.54■□□□□ 0.24
VSX1-203ENST00000409285 FBP1P09467 338 aa16.54■□□□□ 0.24
VSX1-203ENST00000409285 PGAM2P15259 253 aa16.54■□□□□ 0.24
VSX1-203ENST00000409285 BAMBIQ13145 260 aa16.54■□□□□ 0.24
VSX1-203ENST00000409285 SCGB2A2Q13296 93 aa16.54■□□□□ 0.24
VSX1-203ENST00000409285 DIAPH2-AS1Q14236 149 aa16.54■□□□□ 0.24
VSX1-203ENST00000409285 ZNF66Q6ZN08 573 aa16.54■□□□□ 0.24
VSX1-203ENST00000409285 DUSP18Q8NEJ0 188 aa16.54■□□□□ 0.24
VSX1-203ENST00000409285 C17orf50Q8WW18 174 aa16.54■□□□□ 0.24
VSX1-203ENST00000409285 HSD17B10Q99714 261 aaKnown RBP16.54■□□□□ 0.24
VSX1-203ENST00000409285 MS4A7Q9GZW8 240 aaPredicted RBP16.54■□□□□ 0.24
VSX1-203ENST00000409285 MEGF9Q9H1U4 602 aa16.54■□□□□ 0.24
VSX1-203ENST00000409285 SLC2A9Q9NRM0 540 aa16.54■□□□□ 0.24
VSX1-203ENST00000409285 VSIG4Q9Y279 399 aa16.54■□□□□ 0.24
VSX1-203ENST00000409285 VGLL3A8MV65 326 aa16.53■□□□□ 0.24
VSX1-203ENST00000409285 ARHGDIBP52566 201 aa16.53■□□□□ 0.24
VSX1-203ENST00000409285 SSX2Q16385 188 aa16.53■□□□□ 0.24
VSX1-203ENST00000409285 AANATQ16613 207 aa16.53■□□□□ 0.24
VSX1-203ENST00000409285 NRARPQ7Z6K4 114 aa16.53■□□□□ 0.24
VSX1-203ENST00000409285 DYNAPQ8N1N2 210 aa16.53■□□□□ 0.24
VSX1-203ENST00000409285 ENKURQ8TC29 256 aa16.53■□□□□ 0.24
VSX1-203ENST00000409285 ADTRPQ96IZ2 230 aa16.53■□□□□ 0.24
VSX1-203ENST00000409285 PRDM13Q9H4Q3 707 aa16.53■□□□□ 0.24
VSX1-203ENST00000409285 FN1P02751 2386 aaKnown RBP16.52■□□□□ 0.24
VSX1-203ENST00000409285 IGHV1-3A0A0C4DH29 117 aa16.52■□□□□ 0.23
VSX1-203ENST00000409285 TCRBP04435 133 aa16.52■□□□□ 0.23
VSX1-203ENST00000409285 S100GP29377 79 aa16.52■□□□□ 0.23
VSX1-203ENST00000409285 DUTP33316 252 aaKnown RBP16.52■□□□□ 0.23
VSX1-203ENST00000409285 SRP14P37108 136 aaKnown RBP16.52■□□□□ 0.23
VSX1-203ENST00000409285 DYNLT3P51808 116 aa16.52■□□□□ 0.23
VSX1-203ENST00000409285 IL17RELQ6ZVW7 336 aa16.52■□□□□ 0.23
VSX1-203ENST00000409285 RTBDNQ9BSG5 229 aaPredicted RBP16.52■□□□□ 0.23
VSX1-203ENST00000409285 C14orf166Q9Y224 244 aaKnown RBP16.52■□□□□ 0.23
VSX1-203ENST00000409285 FAM96BQ9Y3D0 163 aa16.52■□□□□ 0.23
VSX1-203ENST00000409285 NIPBLQ6KC79 2804 aaeCLIP16.52■□□□□ 0.23
VSX1-203ENST00000409285 CUBNO60494 3623 aa16.52■□□□□ 0.23
VSX1-203ENST00000409285 M0R1X1 148 aa16.51■□□□□ 0.23
VSX1-203ENST00000409285 CT45A6P0DMU7 189 aa16.51■□□□□ 0.23
VSX1-203ENST00000409285 CT45A5P0DMU8 189 aa16.51■□□□□ 0.23
VSX1-203ENST00000409285 CT45A7P0DMV0 189 aa16.51■□□□□ 0.23
VSX1-203ENST00000409285 THBS3P49746 956 aa16.51■□□□□ 0.23
VSX1-203ENST00000409285 TAGLNQ01995 201 aaKnown RBP16.51■□□□□ 0.23
VSX1-203ENST00000409285 DDB2Q92466 427 aa16.51■□□□□ 0.23
VSX1-203ENST00000409285 CFHR4Q92496 578 aa16.51■□□□□ 0.23
VSX1-203ENST00000409285 NABP2Q9BQ15 211 aa16.51■□□□□ 0.23
VSX1-203ENST00000409285 MRPL20Q9BYC9 149 aaKnown RBP16.51■□□□□ 0.23
VSX1-203ENST00000409285 C20orf85Q9H1P6 137 aa16.51■□□□□ 0.23
VSX1-203ENST00000409285 OCEL1Q9H607 264 aa16.51■□□□□ 0.23
VSX1-203ENST00000409285 HILPDAQ9Y5L2 63 aa16.51■□□□□ 0.23
VSX1-203ENST00000409285 RNF212BA8MTL3 300 aa16.5■□□□□ 0.23
VSX1-203ENST00000409285 REG1BP48304 166 aa16.5■□□□□ 0.23
VSX1-203ENST00000409285 PIGPP57054 158 aa16.5■□□□□ 0.23
VSX1-203ENST00000409285 TRIM16LQ309B1 348 aa16.5■□□□□ 0.23
VSX1-203ENST00000409285 ABCA11PQ4W5N1 156 aa16.5■□□□□ 0.23
VSX1-203ENST00000409285 CCDC71LQ8N9Z2 235 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms