RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 FAM216AQ8WUB2 273 aa11.21□□□□□ -0.62
RNF43-201ENST00000407977 ZNF385AQ96PM9 386 aaKnown RBP11.21□□□□□ -0.62
RNF43-201ENST00000407977 DIRC2Q96SL1 478 aa11.21□□□□□ -0.62
RNF43-201ENST00000407977 SPAG17Q6Q759 2223 aa11.21□□□□□ -0.62
RNF43-201ENST00000407977 TRAV39A0A0B4J263 110 aa11.21□□□□□ -0.62
RNF43-201ENST00000407977 PEBP1P30086 187 aaKnown RBP11.21□□□□□ -0.62
RNF43-201ENST00000407977 MMD2Q8IY49 270 aa11.21□□□□□ -0.62
RNF43-201ENST00000407977 TMEM52Q8NDY8 209 aa11.21□□□□□ -0.62
RNF43-201ENST00000407977 CT55Q8WUE5 264 aa11.21□□□□□ -0.62
RNF43-201ENST00000407977 HIST1H4GQ99525 98 aa11.21□□□□□ -0.62
RNF43-201ENST00000407977 DTX4Q9Y2E6 619 aa11.21□□□□□ -0.62
RNF43-201ENST00000407977 RP1L1Q8IWN7 2480 aaPredicted RBP11.2□□□□□ -0.62
RNF43-201ENST00000407977 COL10A1Q03692 680 aa11.2□□□□□ -0.62
RNF43-201ENST00000407977 TMEM30BQ3MIR4 351 aa11.2□□□□□ -0.62
RNF43-201ENST00000407977 TMEM78Q5T7P6 136 aa11.2□□□□□ -0.62
RNF43-201ENST00000407977 SCN1AP35498 2009 aa11.2□□□□□ -0.62
RNF43-201ENST00000407977 BTAF1O14981 1849 aa11.2□□□□□ -0.62
RNF43-201ENST00000407977 PSG4Q00888 419 aa11.2□□□□□ -0.62
RNF43-201ENST00000407977 FUT5Q11128 374 aa11.2□□□□□ -0.62
RNF43-201ENST00000407977 TMEM187Q14656 261 aa11.2□□□□□ -0.62
RNF43-201ENST00000407977 SDHCQ99643 169 aaPredicted RBP11.2□□□□□ -0.62
RNF43-201ENST00000407977 MRPL32Q9BYC8 188 aaKnown RBP11.2□□□□□ -0.62
RNF43-201ENST00000407977 OR2J1Q9GZK6 312 aa11.2□□□□□ -0.62
RNF43-201ENST00000407977 GSN-AS1Q9NRJ2 163 aa11.2□□□□□ -0.62
RNF43-201ENST00000407977 PCM1Q15154 2024 aa11.2□□□□□ -0.62
RNF43-201ENST00000407977 TMEM14DPA8MWL7 114 aa11.2□□□□□ -0.62
RNF43-201ENST00000407977 CRXO43186 299 aaPredicted RBP11.2□□□□□ -0.62
RNF43-201ENST00000407977 SCTP09683 121 aa11.2□□□□□ -0.62
RNF43-201ENST00000407977 STAG3L3P0CL85 134 aa11.2□□□□□ -0.62
RNF43-201ENST00000407977 Q5BKY6 102 aa11.2□□□□□ -0.62
RNF43-201ENST00000407977 ZDHHC8Q9ULC8 765 aa11.2□□□□□ -0.62
RNF43-201ENST00000407977 LOC105371267A0A1B0GV96 52 aa11.2□□□□□ -0.62
RNF43-201ENST00000407977 LIPFP07098 398 aa11.2□□□□□ -0.62
RNF43-201ENST00000407977 EFNB1P98172 346 aa11.2□□□□□ -0.62
RNF43-201ENST00000407977 ITGB4P16144 1822 aa11.2□□□□□ -0.62
RNF43-201ENST00000407977 TRAV9-1A0A075B6T8 112 aa11.19□□□□□ -0.62
RNF43-201ENST00000407977 PGPA6NDG6 321 aa11.19□□□□□ -0.62
RNF43-201ENST00000407977 TSPAN2O60636 221 aa11.19□□□□□ -0.62
RNF43-201ENST00000407977 SCGB1A1P11684 91 aa11.19□□□□□ -0.62
RNF43-201ENST00000407977 HSPE1P61604 102 aaKnown RBP11.19□□□□□ -0.62
RNF43-201ENST00000407977 RPL31P62899 125 aaKnown RBP11.19□□□□□ -0.62
RNF43-201ENST00000407977 Q96M66 194 aa11.19□□□□□ -0.62
RNF43-201ENST00000407977 SOSTQ9BQB4 213 aa11.19□□□□□ -0.62
RNF43-201ENST00000407977 DNAJC4Q9NNZ3 241 aa11.19□□□□□ -0.62
RNF43-201ENST00000407977 FAM206AQ9NX38 181 aa11.19□□□□□ -0.62
RNF43-201ENST00000407977 TRBV23-1A0A0A0MS06 115 aa11.19□□□□□ -0.62
RNF43-201ENST00000407977 NPIPB13A6NJU9 1138 aa11.19□□□□□ -0.62
RNF43-201ENST00000407977 NPIPB4C9JG80 1138 aa11.19□□□□□ -0.62
RNF43-201ENST00000407977 ZNF708P17019 499 aa11.19□□□□□ -0.62
RNF43-201ENST00000407977 MAGEA5P43359 124 aa11.19□□□□□ -0.62
RNF43-201ENST00000407977 ZNF658BQ4V348 819 aaPredicted RBP11.19□□□□□ -0.62
RNF43-201ENST00000407977 STPG3Q8N7X2 389 aa11.19□□□□□ -0.62
RNF43-201ENST00000407977 AMELYQ99218 206 aa11.19□□□□□ -0.62
RNF43-201ENST00000407977 A0A1W2PP11 408 aa11.19□□□□□ -0.62
RNF43-201ENST00000407977 MMDQ15546 238 aa11.19□□□□□ -0.62
RNF43-201ENST00000407977 MIC13Q5XKP0 118 aa11.19□□□□□ -0.62
RNF43-201ENST00000407977 MDP1Q86V88 176 aa11.19□□□□□ -0.62
RNF43-201ENST00000407977 WNT2BQ93097 391 aa11.19□□□□□ -0.62
RNF43-201ENST00000407977 NPIPB6E9PJ23 425 aa11.19□□□□□ -0.62
RNF43-201ENST00000407977 NPBWR2P48146 333 aa11.19□□□□□ -0.62
RNF43-201ENST00000407977 CSRP3P50461 194 aa11.19□□□□□ -0.62
RNF43-201ENST00000407977 RPL8P62917 257 aaKnown RBP11.19□□□□□ -0.62
RNF43-201ENST00000407977 OR52M1Q8NGK5 317 aa11.19□□□□□ -0.62
RNF43-201ENST00000407977 DPRXA6NFQ7 191 aa11.19□□□□□ -0.62
RNF43-201ENST00000407977 MPV17P39210 176 aa11.19□□□□□ -0.62
RNF43-201ENST00000407977 SOX8P57073 446 aa11.19□□□□□ -0.62
RNF43-201ENST00000407977 C19orf48Q6RUI8 117 aa11.19□□□□□ -0.62
RNF43-201ENST00000407977 NRTNQ99748 197 aa11.19□□□□□ -0.62
RNF43-201ENST00000407977 UNC119Q13432 240 aa11.18□□□□□ -0.62
RNF43-201ENST00000407977 ZNF324O75467 553 aaPredicted RBP11.18□□□□□ -0.62
RNF43-201ENST00000407977 TMEM177Q53S58 311 aa11.18□□□□□ -0.62
RNF43-201ENST00000407977 SLC25A10Q9UBX3 287 aaPredicted RBP11.18□□□□□ -0.62
RNF43-201ENST00000407977 C17orf51A8MQB3 221 aa11.18□□□□□ -0.62
RNF43-201ENST00000407977 NPIPB7O75200 414 aa11.18□□□□□ -0.62
RNF43-201ENST00000407977 OR2H2O95918 312 aa11.18□□□□□ -0.62
RNF43-201ENST00000407977 OR4A5Q8NH83 315 aa11.18□□□□□ -0.62
RNF43-201ENST00000407977 RBFOX2O43251 390 aaKnown RBP eCLIP11.18□□□□□ -0.621e-7■■■■■ 34.5
RNF43-201ENST00000407977 ARL14EPLP0DKL9 152 aa11.18□□□□□ -0.62
RNF43-201ENST00000407977 RIPPLY2Q5TAB7 128 aa11.18□□□□□ -0.62
RNF43-201ENST00000407977 ZNF600Q6ZNG1 722 aa11.18□□□□□ -0.62
RNF43-201ENST00000407977 CYP2G1PQ6ZSU1 146 aa11.18□□□□□ -0.62
RNF43-201ENST00000407977 RPP25Q9BUL9 199 aaKnown RBP11.18□□□□□ -0.62
RNF43-201ENST00000407977 SH3BGRL3Q9H299 93 aa11.18□□□□□ -0.62
RNF43-201ENST00000407977 TAF1P21675 1872 aa11.18□□□□□ -0.62
RNF43-201ENST00000407977 C1QCP02747 245 aa11.17□□□□□ -0.62
RNF43-201ENST00000407977 NUBP1P53384 320 aa11.17□□□□□ -0.62
RNF43-201ENST00000407977 SYT8Q8NBV8 401 aa11.17□□□□□ -0.62
RNF43-201ENST00000407977 LOC390937A0A1W2PQ73 354 aa11.17□□□□□ -0.62
RNF43-201ENST00000407977 KLK10O43240 276 aa11.17□□□□□ -0.62
RNF43-201ENST00000407977 LMX1BO60663 402 aa11.17□□□□□ -0.62
RNF43-201ENST00000407977 COX5BP10606 129 aa11.17□□□□□ -0.62
RNF43-201ENST00000407977 HOXA5P20719 270 aa11.17□□□□□ -0.62
RNF43-201ENST00000407977 C1orf53Q5VUE5 145 aa11.17□□□□□ -0.62
RNF43-201ENST00000407977 ZNF714Q96N38 554 aa11.17□□□□□ -0.62
RNF43-201ENST00000407977 PPIAL4EA0A075B759 164 aa11.17□□□□□ -0.62
RNF43-201ENST00000407977 TRAV30A0A087WSZ9 112 aa11.17□□□□□ -0.62
RNF43-201ENST00000407977 A0A0J9YW62 118 aa11.17□□□□□ -0.62
RNF43-201ENST00000407977 PPIAL4DF5H284 164 aa11.17□□□□□ -0.62
RNF43-201ENST00000407977 SMIM13P0DJ93 91 aa11.17□□□□□ -0.62
RNF43-201ENST00000407977 PPIAL4FP0DN26 164 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms