RNA–Protein interactions for RNA: ENST00000406516.5

LIMK2-204, Transcript of LIM domain kinase 2, humanhuman

TSL 5 BASIC

Gene LIMK2, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-204ENST00000406516 DIDO1Q9BTC0 2240 aaKnown RBP12.8□□□□□ -0.36
LIMK2-204ENST00000406516 TRGV5A0A0B4J1U4 118 aa12.8□□□□□ -0.36
LIMK2-204ENST00000406516 SMPD2O60906 423 aa12.8□□□□□ -0.36
LIMK2-204ENST00000406516 YIF1AO95070 293 aa12.8□□□□□ -0.36
LIMK2-204ENST00000406516 WDYHV1Q96HA8 205 aa12.8□□□□□ -0.36
LIMK2-204ENST00000406516 TRAV1-1A0A0B4J248 108 aa12.79□□□□□ -0.36
LIMK2-204ENST00000406516 IGHG3P01860 377 aa12.79□□□□□ -0.36
LIMK2-204ENST00000406516 CD200P41217 278 aa12.79□□□□□ -0.36
LIMK2-204ENST00000406516 ELLP55199 621 aaPredicted RBP12.79□□□□□ -0.36
LIMK2-204ENST00000406516 ERVK11-1P61568 191 aa12.79□□□□□ -0.36
LIMK2-204ENST00000406516 HBG1P69891 147 aa12.79□□□□□ -0.36
LIMK2-204ENST00000406516 HBG2P69892 147 aa12.79□□□□□ -0.36
LIMK2-204ENST00000406516 HOXA4Q00056 320 aaPredicted RBP12.79□□□□□ -0.36
LIMK2-204ENST00000406516 OR2B11Q5JQS5 317 aa12.79□□□□□ -0.36
LIMK2-204ENST00000406516 SLC35E3Q7Z769 313 aa12.79□□□□□ -0.36
LIMK2-204ENST00000406516 Q8IYB0 196 aa12.79□□□□□ -0.36
LIMK2-204ENST00000406516 HIPK2Q9H2X6 1198 aa12.79□□□□□ -0.36
LIMK2-204ENST00000406516 TREM2Q9NZC2 230 aa12.79□□□□□ -0.36
LIMK2-204ENST00000406516 RNF150Q9ULK6 438 aa12.79□□□□□ -0.36
LIMK2-204ENST00000406516 FAM208BQ5VWN6 2430 aa12.79□□□□□ -0.36
LIMK2-204ENST00000406516 WNT2P09544 360 aa12.79□□□□□ -0.36
LIMK2-204ENST00000406516 BCL2P10415 239 aa12.79□□□□□ -0.36
LIMK2-204ENST00000406516 FAM53AQ6NSI3 398 aaPredicted RBP12.79□□□□□ -0.36
LIMK2-204ENST00000406516 RCC1LQ96I51 464 aaKnown RBP12.79□□□□□ -0.36
LIMK2-204ENST00000406516 CDH20Q9HBT6 801 aa12.79□□□□□ -0.36
LIMK2-204ENST00000406516 UBE2L5PA0A1B0GUS4 154 aa12.78□□□□□ -0.36
LIMK2-204ENST00000406516 PPIHO43447 177 aaKnown RBP12.78□□□□□ -0.36
LIMK2-204ENST00000406516 PGA5P0DJD9 388 aa12.78□□□□□ -0.36
LIMK2-204ENST00000406516 FAM90A2PQ658T7 463 aa12.78□□□□□ -0.36
LIMK2-204ENST00000406516 OR8G2PQ6IF36 304 aa12.78□□□□□ -0.36
LIMK2-204ENST00000406516 SLC25A40Q8TBP6 338 aa12.78□□□□□ -0.36
LIMK2-204ENST00000406516 NBASA2RRP1 2371 aa12.78□□□□□ -0.36
LIMK2-204ENST00000406516 SH2D1BO14796 132 aa12.78□□□□□ -0.36
LIMK2-204ENST00000406516 CYB5BO43169 146 aa12.78□□□□□ -0.36
LIMK2-204ENST00000406516 LYZL6O75951 148 aa12.78□□□□□ -0.36
LIMK2-204ENST00000406516 GLIPR1P48060 266 aa12.78□□□□□ -0.36
LIMK2-204ENST00000406516 NDUFA6P56556 154 aa12.78□□□□□ -0.36
LIMK2-204ENST00000406516 LRRC75BQ2VPJ9 315 aa12.78□□□□□ -0.36
LIMK2-204ENST00000406516 CXorf67Q86X51 503 aaPredicted RBP12.78□□□□□ -0.36
LIMK2-204ENST00000406516 GCNT2Q8N0V5 402 aa12.78□□□□□ -0.36
LIMK2-204ENST00000406516 FGFRL1Q8N441 504 aa12.78□□□□□ -0.36
LIMK2-204ENST00000406516 OR4C12Q96R67 309 aa12.78□□□□□ -0.36
LIMK2-204ENST00000406516 GTF3C1Q12789 2109 aa12.78□□□□□ -0.36
LIMK2-204ENST00000406516 RAMP3O60896 148 aa12.77□□□□□ -0.36
LIMK2-204ENST00000406516 UBE2NP61088 152 aaKnown RBP12.77□□□□□ -0.36
LIMK2-204ENST00000406516 MRPL49Q13405 166 aaKnown RBP12.77□□□□□ -0.36
LIMK2-204ENST00000406516 KRTCAP3Q53RY4 240 aa12.77□□□□□ -0.36
LIMK2-204ENST00000406516 ZNF808Q8N4W9 903 aaPredicted RBP12.77□□□□□ -0.36
LIMK2-204ENST00000406516 OR1L1Q8NH94 360 aa12.77□□□□□ -0.36
LIMK2-204ENST00000406516 MBNL3Q9NUK0 354 aaKnown RBP12.77□□□□□ -0.36
LIMK2-204ENST00000406516 CISD1Q9NZ45 108 aaKnown RBP12.77□□□□□ -0.36
LIMK2-204ENST00000406516 MIOXQ9UGB7 285 aa12.77□□□□□ -0.36
LIMK2-204ENST00000406516 CHD3Q12873 2000 aaKnown RBP12.77□□□□□ -0.37
LIMK2-204ENST00000406516 PSPNO60542 156 aa12.77□□□□□ -0.37
LIMK2-204ENST00000406516 CLDN1O95832 211 aa12.77□□□□□ -0.37
LIMK2-204ENST00000406516 TLE1Q04724 770 aa12.77□□□□□ -0.37
LIMK2-204ENST00000406516 ZNF146Q15072 292 aa12.77□□□□□ -0.37
LIMK2-204ENST00000406516 PSMG3Q9BT73 122 aaPredicted RBP12.77□□□□□ -0.37
LIMK2-204ENST00000406516 TMPRSS5Q9H3S3 457 aa12.77□□□□□ -0.37
LIMK2-204ENST00000406516 SIRT7Q9NRC8 400 aa12.77□□□□□ -0.37
LIMK2-204ENST00000406516 HAND1O96004 215 aa12.76□□□□□ -0.37
LIMK2-204ENST00000406516 OR3A1P47881 315 aa12.76□□□□□ -0.37
LIMK2-204ENST00000406516 SLC38A11Q08AI6 406 aa12.76□□□□□ -0.37
LIMK2-204ENST00000406516 ZNF610Q8N9Z0 462 aa12.76□□□□□ -0.37
LIMK2-204ENST00000406516 OR10G4Q8NGN3 311 aa12.76□□□□□ -0.37
LIMK2-204ENST00000406516 WDR61Q9GZS3 305 aaKnown RBP12.76□□□□□ -0.37
LIMK2-204ENST00000406516 OR2D2Q9H210 308 aa12.76□□□□□ -0.37
LIMK2-204ENST00000406516 TINAGQ9UJW2 476 aa12.76□□□□□ -0.37
LIMK2-204ENST00000406516 WIPI2Q9Y4P8 454 aa12.76□□□□□ -0.37
LIMK2-204ENST00000406516 RP1L1Q8IWN7 2480 aaPredicted RBP12.76□□□□□ -0.37
LIMK2-204ENST00000406516 CXorf65A6NEN9 183 aa12.76□□□□□ -0.37
LIMK2-204ENST00000406516 CEBPZOSA8MTT3 80 aa12.76□□□□□ -0.37
LIMK2-204ENST00000406516 WNT9BO14905 357 aa12.76□□□□□ -0.37
LIMK2-204ENST00000406516 KRASP01116 189 aa12.76□□□□□ -0.37
LIMK2-204ENST00000406516 TFF1P04155 84 aa12.76□□□□□ -0.37
LIMK2-204ENST00000406516 ZNF816Q0VGE8 651 aaPredicted RBP12.76□□□□□ -0.37
LIMK2-204ENST00000406516 PSG7Q13046 419 aa12.76□□□□□ -0.37
LIMK2-204ENST00000406516 GFRALQ6UXV0 394 aa12.76□□□□□ -0.37
LIMK2-204ENST00000406516 ZNF826PQ6ZT77 177 aa12.76□□□□□ -0.37
LIMK2-204ENST00000406516 MBD3L1Q8WWY6 194 aa12.76□□□□□ -0.37
LIMK2-204ENST00000406516 RBKSQ9H477 322 aa12.76□□□□□ -0.37
LIMK2-204ENST00000406516 DOK5Q9P104 306 aa12.76□□□□□ -0.37
LIMK2-204ENST00000406516 MAP1LC3B2A6NCE7 125 aa12.75□□□□□ -0.37
LIMK2-204ENST00000406516 AQP7O14520 342 aa12.75□□□□□ -0.37
LIMK2-204ENST00000406516 IGHV1-2P23083 117 aa12.75□□□□□ -0.37
LIMK2-204ENST00000406516 G6PCP35575 357 aa12.75□□□□□ -0.37
LIMK2-204ENST00000406516 TMEM41BQ5BJD5 291 aa12.75□□□□□ -0.37
LIMK2-204ENST00000406516 BEND4Q6ZU67 534 aa12.75□□□□□ -0.37
LIMK2-204ENST00000406516 MAP1LC3BQ9GZQ8 125 aa12.75□□□□□ -0.37
LIMK2-204ENST00000406516 OBP2BQ9NPH6 170 aa12.75□□□□□ -0.37
LIMK2-204ENST00000406516 KCNIP1Q9NZI2 227 aa12.75□□□□□ -0.37
LIMK2-204ENST00000406516 RNF212BA8MTL3 300 aa12.75□□□□□ -0.37
LIMK2-204ENST00000406516 TRGC2P03986 189 aa12.75□□□□□ -0.37
LIMK2-204ENST00000406516 HOXA5P20719 270 aa12.75□□□□□ -0.37
LIMK2-204ENST00000406516 MPV17P39210 176 aa12.75□□□□□ -0.37
LIMK2-204ENST00000406516 SERF2P84101 59 aa12.75□□□□□ -0.37
LIMK2-204ENST00000406516 OR52L2PQ8NGH6 319 aa12.75□□□□□ -0.37
LIMK2-204ENST00000406516 CA5BP1Q8WTZ4 195 aa12.75□□□□□ -0.37
LIMK2-204ENST00000406516 TAF15Q92804 592 aaKnown RBP eCLIP12.75□□□□□ -0.371e-5■■■□□ 19
LIMK2-204ENST00000406516 TOLLIPQ9H0E2 274 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms